IslandPath Analysis: Wolbachia endosymbiont strain TRS of Brugia malayi



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 34.55   STD DEV: 2.88
Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome - 1..1080084
805 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
67	 30.63	-1	89238..89459	-	73	58584328	-	Wbm0067	-	hypothetical protein
68	 33.99	0	90084..90389	-	101	58584329	-	Wbm0068	-	hypothetical protein
69	 28.86	-1	90508..90753	-	81	58584330	-	Wbm0069	-	hypothetical protein
70	 33.18	0	92860..94146	+	428	58584331	-	Wbm0070	-	Mg2+/Co2+ transporter
71	 34.50	0	94156..94413	+	85	58584332	-	Wbm0071	-	hypothetical protein
72	 35.64	0	94414..94977	+	187	58584333	-	Wbm0072	-	3-polyprenyl-4-hydroxybenzoate decarboxylase
73	 35.47	0	94981..95868	+	295	58584334	-	Wbm0073	-	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
74	 33.21	0	95919..96713	+	264	58584335	-	Wbm0074	-	xylanase/chitin deacetylase
75	 36.97	0	96704..98269	+	521	58584336	-	Wbm0075	-	cell division protein FtsI
76	 38.59	+1	98390..99568	+	392	58584337	-	Wbm0076	-	WAS family protein
77	 37.48	+1	99667..100944	+	425	58584338	-	Wbm0077	-	prolyl-tRNA synthetase
78	 36.51	0	100941..101318	+	125	58584339	-	Wbm0078	-	phosphopantetheinyl transferase (holo-ACP synthase)
79	 35.86	0	101341..102132	-	263	58584340	-	Wbm0079	-	prolipoprotein diacylglyceryl transferase
80	 31.33	-1	102139..102588	-	149	58584341	smpB	Wbm0080	-	SsrA-binding protein
81	 24.41	-2	103118..103330	+	70	58584342	-	Wbm0081	-	hypothetical protein
82	 31.47	-1	104274..104864	-	196	58584343	-	Wbm0082	-	hypothetical protein
83	 34.17	0	104921..105517	-	198	58584344	-	Wbm0083	-	riboflavin synthase subunit alpha
84	 28.02	-2	105533..105739	-	68	58584345	-	Wbm0084	-	hypothetical protein
85	 29.17	-1	105960..106247	-	95	58584346	-	Wbm0085	-	hypothetical protein
86	 30.26	-1	106982..107209	-	75	58584347	-	Wbm0086	-	hypothetical protein
87	 36.40	0	107354..108397	+	347	58584348	-	Wbm0087	-	phenylalanyl-tRNA synthetase alpha subunit
88	 36.77	0	108416..109636	+	406	58584349	-	Wbm0088	-	N-acetylglucosamine-1-phosphate uridyltransferase
89	 35.68	0	111715..112182	-	155	58584350	-	Wbm0089	-	hypothetical protein
90	 32.83	0	112667..112864	-	65	58584351	-	Wbm0090	-	hypothetical protein
91	 25.93	-2	113096..113338	-	80	58584352	-	Wbm0091	-	hypothetical protein
92	 36.91	0	113479..114093	+	204	58584353	-	Wbm0092	-	50S ribosomal protein L25/general stress protein Ctc
93	 34.61	0	114093..114641	+	182	58584354	-	Wbm0093	-	peptidyl-tRNA hydrolase
94	 35.42	0	115628..115867	+	79	58584355	-	Wbm0094	-	hypothetical protein
95	 31.88	0	115943..116149	+	68	58584356	-	Wbm0095	-	hypothetical protein
96	 32.64	0	116557..116988	+	143	58584357	-	Wbm0096	-	membrane protein WF-2
97	 37.54	+1	120801..121703	+	300	58584358	-	Wbm0097	-	fructose-bisphosphate aldolase
98	 36.12	0	124063..125103	+	346	58584359	-	Wbm0098	-	dihydroorotate dehydrogenase 2
99	 33.61	0	125151..125882	+	243	58584360	-	Wbm0099	-	dsRNA-specific ribonuclease
100	 33.21	0	127571..128380	-	269	58584361	-	Wbm0100	-	Outer surface protein Wsp
101	 33.09	0	128423..129658	-	411	58584362	-	Wbm0101	-	2-methylthioadenine synthetase
102	 35.59	0	129837..130190	-	117	58584363	-	Wbm0102	-	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
103	 36.35	0	130180..131106	-	308	58584364	-	Wbm0103	-	phosphoribosylpyrophosphate synthetase
104	 27.03	-2	132148..132369	+	73	58584365	-	Wbm0104	-	hypothetical protein
105	 31.46	-1	132717..132929	+	70	58584366	-	Wbm0105	-	hypothetical protein
106	 25.56	-2	134739..135098	+	119	58584367	-	Wbm0106	-	hypothetical protein
107	 35.53	0	135790..136791	+	333	58584368	mraW	Wbm0107	-	S-adenosyl-methyltransferase MraW
108	 37.73	+1	140462..141622	-	386	58584369	-	Wbm0108	-	dihydrolipoamide acyltransferase E2 component
109	 30.57	-1	142670..143320	+	216	58584370	-	Wbm0109	-	hypothetical protein
110	 34.63	0	143322..143939	-	205	58584371	-	Wbm0110	-	hypothetical protein
111	 36.78	0	146321..147103	-	260	58584372	-	Wbm0112	-	methionine aminopeptidase
112	 36.16	0	147479..148717	-	412	58584373	-	Wbm0113	-	Actin-like ATPase involved in cell division, FtsA
113	 35.00	0	148853..149392	+	179	58584374	-	Wbm0114	-	N-formylmethionyl-tRNA deformylase
114	 36.95	0	149382..150182	+	266	58584375	-	Wbm0115	-	Uracil-DNA glycosylase
115	 29.84	-1	151079..151336	-	85	58584376	-	Wbm0116	-	hypothetical protein
116	 37.22	0	152403..153071	-	222	58584377	-	Wbm0117	-	lipoprotein
117	 34.29	0	153077..154747	+	556	58584378	-	Wbm0118	-	UDP-N-acetylmuramate-alanine ligase
118	 38.73	+1	154749..156026	+	425	58584379	-	Wbm0119	-	enolase
119	 35.29	0	156014..157036	+	340	58584380	obgE	Wbm0120	-	GTPase ObgE
120	 30.96	-1	157131..159701	-	856	58584381	-	Wbm0121	-	hypothetical protein
121	 33.53	0	159698..161191	-	497	58584382	-	Wbm0122	-	hypothetical protein
122	 38.45	+1	162935..163462	-	175	58584383	-	Wbm0123	-	cytochrome c2
123	 38.16	+1	164283..166022	+	579	58584384	-	Wbm0124	-	single-stranded DNA-specific exonuclease RecJ
124	 40.84	+2	166033..167205	-	390	58584385	-	Wbm0125	-	NADH dehydrogenase subunit D
125	 31.93	0	168004..169074	-	356	58584386	recF	Wbm0126	-	recombination protein F
126	 32.05	0	169091..169558	-	155	58584387	-	Wbm0127	-	peroxiredoxin
127	 29.76	-1	169618..171045	-	475	58584388	-	Wbm0128	-	membrane associated signal transduction histidine kinase
128	 35.76	0	171111..172304	+	397	58584389	-	Wbm0129	-	bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
129	 30.37	-1	172294..172800	+	168	58584390	-	Wbm0130	-	RimM protein, required for 16S rRNA processing
130	 34.39	0	172864..173430	+	188	58584391	-	Wbm0131	-	translation elongation factor P, EF-P
131	 35.91	0	173439..174137	+	232	58584392	-	Wbm0132	-	fructose-1,6-bisphosphatase
132	 37.57	+1	174129..175331	-	400	58584393	-	Wbm0133	-	5-aminolevulinate synthase
133	 35.74	0	175968..176216	-	82	58584394	-	Wbm0134	-	hypothetical protein
134	 37.04	0	176454..176723	-	89	58584395	-	Wbm0135	-	hypothetical protein
135	 33.33	0	178100..178654	-	184	58584396	-	Wbm0136	-	hypothetical protein
136	 30.74	-1	178688..178996	-	102	58584397	-	Wbm0137	-	hypothetical protein
137	 37.62	+1	179189..181102	-	637	58584398	-	Wbm0138	-	heat shock protein 90
138	 29.44	-1	182083..182262	-	59	58584399	-	Wbm0139	-	hypothetical protein
139	 38.84	+1	182298..182642	-	114	58584400	-	Wbm0140	-	hypothetical protein
140	 40.00	+1	182626..182820	-	64	58584401	-	Wbm0141	-	hypothetical protein
141	 32.22	0	183152..183691	+	179	58584402	-	Wbm0142	-	phosphatase
142	 32.53	0	183691..184185	+	164	58584403	-	Wbm0143	-	hypothetical protein
143	 34.34	0	184267..184662	+	131	58584404	-	Wbm0144	-	bacterioferritin/cytochrome b1
144	 36.82	0	184837..185352	+	171	58584405	-	Wbm0145	-	SurF1 family protein
145	 37.06	0	185400..187118	-	572	58584406	-	Wbm0146	-	Kef-type K+ transport system, membrane component
146	 31.76	0	187124..187696	-	190	58584407	-	Wbm0147	-	thiol-disulfide isomerase
147	 35.76	0	187805..188422	+	205	58584408	-	Wbm0148	-	thymidylate kinase
148	 34.90	0	188992..189183	-	63	58584409	-	Wbm0149	-	hypothetical protein
149	 37.27	0	189447..191276	-	609	58584410	-	Wbm0150	-	ATP-dependent Zn protease, HflB
150	 34.34	0	191289..192584	-	431	58584411	-	Wbm0151	-	ATPase
151	 34.17	0	192758..193237	-	159	58584412	-	Wbm0152	-	Outer membrane protein, pal-like
152	 32.70	0	193507..194934	+	475	58584413	-	Wbm0153	-	Zn-dependent carboxypeptidase
153	 38.35	+1	194956..196032	+	358	58584414	-	Wbm0154	-	Actin-like ATPase involved in cell morphogenesis, MreB
154	 38.26	+1	196746..197903	+	385	58584415	-	Wbm0155	-	tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
155	 31.09	-1	199597..199908	-	103	58584416	-	Wbm0156	-	hypothetical protein
156	 31.86	0	200200..200403	-	67	58584417	-	Wbm0157	-	hypothetical protein
157	 36.03	0	201650..202576	+	308	58584418	glpX	Wbm0158	-	fructose 1,6-bisphosphatase II
158	 37.41	0	203574..204677	-	367	58584419	-	Wbm0159	-	translation-associated GTPase
159	 36.25	0	205874..207073	+	399	58584420	-	Wbm0160	-	tRNA nucleotidyltransferase/poly(A) polymerase
160	 32.42	0	207096..207314	-	72	58584421	-	Wbm0161	-	hypothetical protein
161	 28.42	-2	207372..207554	-	60	58584422	-	Wbm0162	-	hypothetical protein
162	 29.89	-1	207502..207762	-	86	58584423	-	Wbm0163	-	hypothetical protein
163	 36.52	0	207884..208165	-	93	58584424	-	Wbm0164	-	hypothetical protein
164	 35.52	0	208171..208353	-	60	58584425	-	Wbm0165	-	hypothetical protein
165	 36.36	0	209126..209356	-	76	58584426	-	Wbm0166	-	hypothetical protein
166	 35.69	0	211325..212596	+	423	58584427	-	Wbm0167	-	major facilitator superfamily permease
34.55	MEAN

2.88	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.