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Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 927 36.90 0 1046367..1047290 - 307 59714105 luxD VF_A0922 - acyl transferase 928 35.42 0 1047306..1048745 - 479 59714106 luxC VF_A0923 - acyl-CoA reductase LuxC 929 34.38 0 1048783..1049355 - 190 59714107 luxI VF_A0924 - 3-oxo-C6-HSL autoinducer synthesis protein LuxI 930 30.41 -1 1049571..1050323 + 250 59714108 luxR VF_A0925 - autoinducer-binding transcriptional activator protein LuxR 931 37.08 0 1050365..1051165 - 266 59714109 - VF_A0926 - hypothetical protein 932 30.77 -1 1051347..1051541 - 64 59714110 - VF_A0927 - hypothetical protein 933 42.01 +1 1051848..1052585 + 245 59714111 yjiH VF_A0928 - inner membrane protein 934 41.24 +1 1052585..1053052 + 155 59714112 yjiG VF_A0929 - hypothetical protein 935 44.27 +1 1053062..1054186 + 374 59714113 - VF_A0930 - carboxypeptidase G2 precursor 936 35.75 0 1054291..1055076 - 261 59714114 - VF_A0931 - transcriptional regulatory protein, AraC-like protein 937 40.27 0 1055100..1055618 - 172 59714115 ybhB VF_A0932 - kinase inhibitor 938 34.65 0 1055758..1056213 - 151 59714116 - VF_A0933 - hypothetical protein 939 39.23 0 1056449..1056838 + 129 59714117 ygbA VF_A0934 - hypothetical protein 940 38.10 0 1056835..1057716 + 293 59714118 - VF_A0935 - LysR family transcriptional regulator 941 33.94 0 1057732..1058562 + 276 59714119 - VF_A0936 - lipase/acylhydrolase family protein 942 39.60 0 1058618..1059271 - 217 59714120 - VF_A0937 - phosphoglycolate phosphatase 943 38.54 0 1059425..1060039 - 204 59714121 - VF_A0938 - threonine efflux protein 944 38.48 0 1060117..1060641 + 174 59714122 - VF_A0939 - hypothetical protein 945 43.48 +1 1060717..1062450 - 577 59714123 fruA VF_A0940 - fused fructose-specific PTS enzymes: iibcomponent/IIC components 946 41.49 +1 1062481..1063461 - 326 59714124 fruK VF_A0941 - fructose-1-phosphate kinase 947 41.78 +1 1063465..1064601 - 378 59714125 fruB VF_A0942 - bifunctional fructose-specific PTS IIA/HPr protein 948 38.30 0 1064787..1064927 - 46 59714127 - VF_A0944 - hypothetical protein 949 39.47 0 1064887..1065864 + 325 59714126 fruR VF_A0943 - DNA-binding transcriptional regulator FruR 950 34.29 0 1065909..1066535 - 208 59714128 - VF_A0945 - putative lipoprotein 951 35.36 0 1066541..1066984 - 147 59714129 - VF_A0946 - hypothetical protein 952 37.35 0 1067221..1067469 - 82 59714130 - VF_A0947 - hypothetical protein 953 36.23 0 1067512..1067856 - 114 59714131 - VF_A0948 - hypothetical protein 954 34.79 0 1067862..1068479 - 205 59714132 - VF_A0949 - putative lipoprotein 955 31.29 -1 1068476..1069750 - 424 59714133 - VF_A0950 - hypothetical protein 956 35.63 0 1069931..1070278 - 115 59714134 - VF_A0951 - hypothetical protein 957 35.08 0 1070275..1071075 - 266 59714135 - VF_A0952 - hypothetical protein 958 39.52 0 1071080..1073116 - 678 59714136 - VF_A0953 - VgrG protein 959 42.00 +1 1073259..1073777 - 172 59714137 - VF_A0954 - hemolysin co-regulated protein 960 35.94 0 1074016..1074666 - 216 59714138 - VF_A0955 - SAM-dependent methyltransferase 961 39.78 0 1074755..1075576 + 273 59714139 yidA VF_A0956 - hydrolase 962 39.03 0 1075667..1076965 - 432 59714140 yihN VF_A0957 - transporter 963 36.02 0 1077007..1077750 - 247 59714141 glpQ VF_A0958 - glycerophosphoryl diester phosphodiesterase GlpQ (UgpQ) 964 34.04 0 1078131..1080101 - 656 59714142 mifB VF_A0959 - diguanylate cyclase (GGDEF), inhibitor of flagellar motility 965 36.66 0 1080098..1081120 - 340 59714143 mifC VF_A0960 - periplasmic protein that regulates MifA/B activity 966 40.01 0 1081519..1083045 + 508 59714144 yjjI VF_A0961 - hypothetical protein 967 38.93 0 1083054..1083965 + 303 59714145 yjjW VF_A0962 - pyruvate formate lyase activating enzyme 968 35.69 0 1084109..1085041 - 310 59714146 - VF_A0963 - LysR family transcriptional regulator 969 39.30 0 1085339..1085908 + 189 59714147 - VF_A0964 - integral membrane protein 970 38.35 0 1086011..1086808 + 265 59714148 nfsA VF_A0965 - nitroreductase A 971 41.28 +1 1086873..1088243 + 456 59714149 - VF_A0966 - L-serine ammonia-lyase 972 38.57 0 1088475..1089695 + 406 59714150 - VF_A0967 - nucleoside permease NupC 973 37.92 0 1089718..1090437 + 239 59714151 deoD3 VF_A0968 - purine nucleoside phosphorylase deoD-type; PNP 974 38.98 0 1090495..1091841 + 448 59714152 guaD VF_A0969 - guanine deaminase 975 32.86 -1 1091979..1092617 + 212 59714153 - VF_A0970 - hypothetical protein 976 37.95 0 1092630..1093409 - 259 59714154 fecE VF_A0971 - vitamin B12 transport ATP-binding protein BtuD 977 39.87 0 1093406..1094446 - 346 59714155 fecD VF_A0972 - KpLE2 phage-like element; iron-dicitrate transporter subunit 978 37.69 0 1094446..1095363 - 305 59714156 - VF_A0973 - ABC transporter, periplasmic component 979 31.01 -1 1095484..1095612 + 42 59714157 - VF_A0974 - hypothetical protein 980 38.36 0 1095602..1096138 + 178 59714158 - VF_A0975 - adenosyltransferase 981 32.39 -1 1096372..1097964 + 530 59714159 - VF_A0976 - GGDEF domain-containing protein 982 38.38 0 1097990..1099198 - 402 59714160 ynfM VF_A0977 - transporter 983 38.51 0 1099285..1100154 + 289 59714161 - VF_A0978 - LysR family transcriptional regulator 984 35.78 0 1100366..1100977 + 203 59714162 - VF_A0979 - hypothetical protein 985 30.73 -1 1101283..1101666 + 127 59714163 - VF_A0980 - hypothetical protein 986 30.40 -1 1101705..1101977 - 90 59714164 - VF_A0981 - hypothetical protein 987 36.74 0 1101998..1102849 - 283 59714165 - VF_A0982 - hypothetical protein 988 28.42 -2 1102865..1103413 - 182 59714166 - VF_A0983 - hypothetical protein 989 28.26 -2 1103475..1104932 + 485 59714167 yfhD VF_A0984 - transglycosylase 990 25.78 -2 1104944..1106161 + 405 59714168 - VF_A0985 - putative lipoprotein 991 37.11 0 1106235..1106816 - 193 59714169 - VF_A0986 - 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme 992 40.55 0 1106806..1107456 - 216 59714170 - VF_A0987 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 993 40.29 0 1107446..1108408 - 320 59714171 kdgK VF_A0988 - ketodeoxygluconokinase 994 39.88 0 1108505..1109359 - 284 59714172 kbaY VF_A0989 - tagatose-bisphosphate aldolase 995 41.34 +1 1109616..1112264 - 882 59714173 - VF_A0990 - trimethylamine-N-oxide reductase 996 37.29 0 1112476..1113993 - 505 59714174 - VF_A0991 - hypothetical protein 997 40.64 0 1114064..1115677 - 537 59714175 ydeN VF_A0992 - hypothetical protein 998 38.04 0 1115718..1116950 - 410 59714176 - VF_A0993 - arylsulfatase regulator (Fe-S oxidoreductase) 999 37.19 0 1117171..1119579 + 802 59714177 - VF_A0994 - hyaluronate lyase precursor 1000 34.06 0 1119734..1120564 + 276 59714178 - VF_A0995 - high-affinity iron permease 1001 41.24 +1 1120650..1121699 - 349 59714179 - VF_A0996 - hypothetical protein 1002 42.20 +1 1121725..1122480 - 251 59714180 kduD VF_A0997 - 2-deoxy-D-gluconate 3-dehydrogenase 1003 40.91 0 1122550..1123380 - 276 59714181 kduI VF_A0998 - 5-keto-4-deoxyuronate isomerase 1004 43.39 +1 1123482..1124624 - 380 59714182 nagA3 VF_A0999 - N-acetylglucosamine-6-phosphate deacetylase 1005 38.81 0 1124626..1125063 - 145 59714183 - VF_A1000 - PTS system, N-acetylgalactosamine-specific IIA component 1006 40.20 0 1125152..1126069 - 305 59714184 agaD VF_A1001 - N-acetylgalactosamine-specific enzyme IID component of PTS 1007 42.02 +1 1126059..1126829 - 256 59714185 agaC VF_A1002 - PTS system, N-acetylgalactosamine-specific IIC component 1008 40.92 0 1126840..1127340 - 166 59714186 agaV VF_A1003 - N-acetylgalactosamine-specific enzyme IIB component of PTS 1009 38.12 0 1127355..1128524 - 389 59714187 agaS VF_A1004 - tagatose-6-phosphate ketose/aldose isomerase 1010 41.32 +1 1128521..1129822 - 433 59714188 kbaZ VF_A1005 - tagatose 6-phosphate aldolase 1, kbaZ subunit 1011 40.41 0 1129870..1130646 - 258 59714189 agaR VF_A1006 - DNA-binding transcriptional dual regulator 1012 39.88 0 1131057..1132613 + 518 59714190 yidJ VF_A1007 - sulfatase/phosphatase 1013 37.17 0 1132693..1133421 + 242 172087822 - VF_A1008 - hypothetical protein 1014 41.94 +1 1133541..1136201 - 886 59714193 - VF_A1010 - beta-hexosaminidase 1015 35.83 0 1136705..1137184 + 159 59714194 ycdZ VF_A1011 - inner membrane protein 1016 34.56 0 1137803..1138702 - 299 59714195 ydeH VF_A1012 - two component response regulator protein 1017 31.52 -1 1138869..1139198 + 109 59714196 - VF_A1013 - hypothetical protein 1018 28.65 -2 1139269..1140849 - 526 59714197 - VF_A1014 - EAL domain-containing protein 1019 32.43 -1 1140896..1141780 - 294 59714198 rpoQ VF_A1015 - sigma-Q factor RpoQ, quorum-sensing regulated RpoS-like sigma subunit 1020 31.06 -1 1142230..1144824 + 864 59714199 - VF_A1016 - two component sensory histidine kinase 1021 31.30 -1 1144834..1146552 + 572 59714200 - VF_A1017 - two component response regulator 1022 37.30 0 1146609..1147112 - 167 59714201 - VF_A1018 - putative lipoprotein 1023 38.20 0 1147075..1149189 - 704 59714202 - VF_A1019 - putative cytoplasmic protein 1024 35.53 0 1149604..1149921 + 105 59714203 sypA VF_A1020 - putative sulphate transporter, anti-sigma factor antagonist 1025 40.24 0 1149970..1150794 + 274 59714204 sypB VF_A1021 - outer membrane protein 1026 40.58 0 1150799..1152910 + 703 59714205 sypC VF_A1022 - periplasmic protein involved in polysaccharide export 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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