version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 822 40.53 0 923014..923847 + 277 59714002 - VF_A0819 - drug/metabolite exporter family protein 823 32.23 -1 923921..924466 - 181 59714003 rpoE3 VF_A0820 - RNA polymerase sigma factor SigZ 824 38.40 0 924577..925287 - 236 59714004 - VF_A0821 - glutathione S-transferase 825 33.33 -1 925424..925681 - 85 59714005 - VF_A0822 - hypothetical protein 826 43.27 +1 925784..926578 - 264 59714006 - VF_A0823 - vulnibactin utilization protein ViuB 827 37.53 0 926590..927351 - 253 59714007 vctC VF_A0824 - ferric anguibactin transport ATP-binding protein 828 34.81 0 927360..928310 - 316 59714008 - VF_A0825 - ferric anguibactin transport system permease protein FatC 829 36.33 0 928361..929194 - 277 59714009 vctD VF_A0826 - ferric anguibactin transport system permease protein FatD 830 35.76 0 929268..930173 - 301 59714010 vctP VF_A0827 - ferric anguibactin-binding protein 831 37.18 0 930385..930618 - 77 172087816 - VF_A1190 - hypothetical protein 832 37.47 0 930886..931248 - 120 59714011 - VF_A0828 - glutaredoxin 2 833 40.15 0 931434..932930 - 498 59714012 putP VF_A0829 - proline:sodium symporter 834 40.82 0 933040..933747 - 235 59714013 - VF_A0830 - delta-1-pyrroline-5-carboxylate dehydrogenase 835 41.11 +1 933762..936938 - 1058 172087817 putA VF_A0832 - proline dehydrogenase 836 32.44 -1 937098..937880 - 260 59714016 - VF_A0833 - AraC family transcriptional regulator 837 39.73 0 938314..940188 + 624 59714017 - VF_A0834 - NirV precursor 838 37.90 0 940344..941132 + 262 59714018 ybbM VF_A0835 - inner membrane protein 839 41.41 +1 941168..942220 + 350 59714019 tas VF_A0836 - oxidoreductase, NADP(H)-dependent aldo-keto reductase 840 37.66 0 942485..945538 - 1017 59714020 - VF_A0837 - putative ATPase involved in pili biogenesis 841 38.30 0 945861..946766 + 301 59714021 - VF_A0838 - hypothetical protein 842 41.32 +1 946838..947764 - 308 59714022 speB VF_A0839 - agmatinase 843 40.50 0 947764..949674 - 636 59714023 speA VF_A0840 - arginine decarboxylase 844 45.16 +2 949957..951216 + 419 59714024 - VF_A0841 - 3-hydroxy-3-methylglutaryl-coenzyme A reductase 845 35.40 0 951297..951827 - 176 59714025 blc VF_A0842 - outer membrane lipoprotein (lipocalin) 846 21.67 -2 951912..952031 - 39 59714026 - VF_A0843 - hypothetical protein 847 40.71 0 952063..953214 + 383 59714027 - VF_A0844 - outer membrane protein P1 precursor 848 38.54 0 953272..954078 - 268 59714028 - VF_A0845 - hypothetical protein 849 36.27 0 954299..955489 + 396 59714029 - VF_A0846 - hypothetical protein 850 39.63 0 955610..956944 - 444 59714030 astB VF_A0847 - succinylarginine dihydrolase 851 38.72 0 957269..958456 + 395 59714031 - VF_A0848 - hypothetical protein 852 40.42 0 958565..959425 - 286 59714032 yghU VF_A0849 - putative glutathione S-transferase YghU 853 36.38 0 959580..960431 + 283 59714033 - VF_A0850 - chloramphenicol-sensitive protein RarD 854 38.62 0 960418..961287 - 289 59714034 - VF_A0851 - transcriptional regulatory protein 855 40.52 0 961400..962554 + 384 59714035 ydcR VF_A0852 - fused DNA-binding transcriptional regulator/ amino transferase 856 41.87 +1 962591..963715 + 374 59714036 - VF_A0853 - zinc-carboxypeptidase precursor 857 33.49 0 964137..964781 - 214 59714037 - VF_A0854 - hypothetical protein 858 40.36 0 964868..965251 - 127 172087818 - VF_A0856 - hypothetical protein 859 36.84 0 965433..965774 + 113 59714040 - VF_A0857 - transcriptional repressor SmtB 860 36.09 0 965865..966917 + 350 59714041 - VF_A0858 - arsenical-resistance protein ACR3 861 36.43 0 966976..968850 - 624 59714042 - VF_A0859 - methyl-accepting chemotaxis protein 862 29.19 -2 969354..969836 + 160 59714043 - VF_A0860 - hypothetical protein 863 31.15 -1 969839..970297 + 152 59714044 - VF_A0861 - hypothetical protein 864 38.41 0 970385..971920 + 511 59714045 norR2 VF_A0862 - anaerobic nitric oxide reductase transcription regulator 865 41.16 +1 972161..973822 + 553 59714046 hcp VF_A0863 - hydroxylamine reductase 866 38.57 0 973917..974948 + 343 59714047 hcr VF_A0864 - HCP oxidoreductase, NADH-dependent 867 32.28 -1 976378..978273 - 631 59714048 - VF_A0865 - methyl-accepting chemotaxis protein 868 33.45 0 978674..979534 - 286 59714049 tcpF VF_A0866 - toxin coregulated pilus biosynthesis protein TcpF 869 28.84 -2 979538..980584 - 348 59714050 tcpE VF_A0867 - toxin coregulated pilus biosynthesis protein TcpE 870 31.46 -1 980538..982031 - 497 59714051 tcpT VF_A0868 - toxin coregulated pilus biosynthesis protein TcpT 871 26.22 -2 982028..982477 - 149 59714052 tcpS VF_A0869 - toxin coregulated pilus biosynthesis protein TcpS 872 24.87 -2 982491..983270 - 259 59714053 tcpD VF_A0870 - toxin coregulated pilus biosynthesis protein TcpD 873 25.62 -2 983258..983737 - 159 59714054 - VF_A0871 - hypothetical protein 874 32.99 -1 983724..985178 - 484 59714055 tcpC VF_A0872 - toxin coregulated pilus outer membrane protein TcpC 875 29.24 -2 985183..985695 - 170 59714056 tcpQ VF_A0873 - toxin coregulated pilus biosynthesis protein TcpY/TcpQ 876 34.75 0 985700..987037 - 445 59714057 tcpB VF_A0874 - toxin coregulated pilus biosynthesis protein TcpB 877 37.32 0 987057..987683 - 208 59714058 tcpA VF_A0875 - toxin coregulated pilin subunit precursor TcpA 878 29.07 -2 987944..988717 + 257 59714059 - VF_A0876 - hypothetical protein 879 30.22 -1 988822..989463 - 213 59714060 - VF_A0877 - chromosome partitioning protein ParA 880 28.21 -2 989657..990007 + 116 59714061 - VF_A0878 - hypothetical protein 881 30.52 -1 990562..991449 - 295 59714062 - VF_A0879 - EAL domain-containing protein 882 24.88 -2 991828..992679 + 283 59714063 - VF_A0880 - putative AraC-type HTH DNA-binding protein 883 38.47 0 992699..996433 - 1244 59714064 - VF_A0881 - cellulose synthase operon C protein 884 38.25 0 996424..997602 - 392 59714065 bcsZ VF_A0882 - endo-1,4-D-glucanase 885 37.65 0 997602..999896 - 764 59714066 bcsB VF_A0883 - cellulose synthase regulator protein 886 37.71 0 999910..1002513 - 867 59714067 bcsA VF_A0884 - cellulose synthase catalytic subunit 887 35.67 0 1002517..1003287 - 256 59714068 - VF_A0885 - hypothetical protein 888 32.36 -1 1003778..1005322 + 514 59714069 bcsE VF_A0886 - hypothetical protein 889 33.82 0 1005327..1005530 + 67 172087819 - VF_A1191 - hypothetical protein 890 37.57 0 1005530..1007158 + 542 59714070 bcsG VF_A0887 - inner membrane protein 891 27.27 -2 1007406..1007702 - 98 59714071 - VF_A0888 - hypothetical protein 892 34.71 0 1007930..1008436 + 168 59714072 tagD VF_A0889 - lipid hydroperoxide peroxidase 893 32.52 -1 1008436..1009047 + 203 59714073 - VF_A0890 - thioredoxin peroxidase 894 28.78 -2 1009204..1010412 - 402 59714074 - VF_A0891 - methyl-accepting chemotaxis protein 895 36.31 0 1011436..1011906 - 156 59714075 yjgK VF_A0892 - hypothetical protein 896 38.18 0 1012020..1013030 + 336 59714076 - VF_A0893 - AraC family transcriptional regulator 897 39.07 0 1013132..1014928 + 598 59714077 - VF_A0894 - putative surface protein 898 40.22 0 1015125..1015487 + 120 59714078 - VF_A0895 - hypothetical protein 899 38.73 0 1015480..1016703 + 407 59714079 - VF_A0896 - multidrug resistance protein A 900 34.49 0 1016754..1017617 - 287 59714080 - VF_A0897 - LysR family transcriptional regulator 901 39.24 0 1017802..1018563 + 253 59714081 - VF_A0898 - putative lipoprotein 902 41.16 +1 1018614..1020134 + 506 59714082 - VF_A0899 - arylsulfatase 903 40.20 0 1020200..1021495 + 431 59714083 aslB VF_A0900 - regulator of arylsulfatase activity 904 41.46 +1 1021525..1022508 + 327 59714084 - VF_A0901 - MoxR protein 905 35.31 0 1022516..1023478 + 320 59714085 - VF_A0902 - MoxR protein 906 36.72 0 1023481..1024011 + 176 59714086 - VF_A0903 - hypothetical protein 907 39.22 0 1024004..1025056 + 350 172087820 - VF_A1192 - hypothetical protein 908 37.78 0 1025049..1026824 + 591 59714087 - VF_A0904 - transporter 909 34.70 0 1026824..1028065 + 413 59714088 - VF_A0905 - hypothetical protein 910 37.58 0 1028288..1029442 + 384 59714089 - VF_A0906 - acriflavin resistance periplasmic protein 911 39.76 0 1029464..1032577 + 1037 59714090 - VF_A0907 - acriflavin resistance plasma membrane protein 912 37.43 0 1032676..1033431 + 251 59714091 - VF_A0908 - putative lipoprotein 913 32.58 -1 1033488..1034285 - 265 59714092 - VF_A0909 - hypothetical protein 914 33.15 -1 1034434..1034991 - 185 59714093 - VF_A0910 - hypothetical protein 915 35.42 0 1035102..1036010 + 302 59714094 - VF_A0911 - LysR family transcriptional regulator 916 34.48 0 1036014..1036274 - 86 172087821 - VF_A1193 - hypothetical protein 917 35.77 0 1036450..1037229 + 259 59714095 - VF_A0912 - ABC transporter ATP-binding protein 918 35.28 0 1037229..1038101 + 290 59714096 - VF_A0913 - hypothetical protein 919 39.68 0 1038152..1039396 - 414 59714097 ytfL VF_A0914 - inner membrane protein 920 35.87 0 1039639..1040190 - 183 59714098 - VF_A0915 - acetyltransferase 921 38.37 0 1040298..1041668 - 456 59714099 - VF_A0916 - multidrug efflux pump VmrA 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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