version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 755 37.67 0 849209..850153 + 314 59713935 ybgA VF_A0752 - hypothetical protein 756 37.64 0 850143..851582 + 479 59713936 phr VF_A0753 - deoxyribodipyrimidine photolyase Phr, FAD-binding 757 37.65 0 851633..853486 + 617 59713937 - VF_A0754 - peptide-methionine (S)-S-oxide reductase 758 34.78 0 853512..853649 - 45 59713938 - VF_A0755 - hypothetical protein 759 38.71 0 853842..854789 + 315 59713939 - VF_A0756 - putative lipoprotein 760 38.15 0 854860..855378 - 172 59713940 - VF_A0757 - hypothetical protein 761 37.70 0 855378..855881 - 167 59713941 - VF_A0758 - hypothetical protein 762 38.25 0 855829..856398 - 189 59713942 - VF_A0759 - hypothetical protein 763 38.42 0 856484..857740 - 418 59713943 cfa VF_A0760 - cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) 764 36.65 0 857749..858501 - 250 59713944 - VF_A0761 - plasmid partition ParA protein 765 36.57 0 858498..859796 - 432 59713945 - VF_A0762 - putative dehydrogenase 766 37.25 0 859754..860494 - 246 59713946 - VF_A0763 - short chain dehydrogenase 767 33.55 0 860491..860958 - 155 59713947 - VF_A0764 - transcriptional regulator 768 38.01 0 861034..861717 - 227 59713948 chrR VF_A0765 - zinc-binding anti-sigmaE4 factor ChrR 769 37.42 0 861710..862321 - 203 59713949 rpoE4 VF_A0766 - RNA polymerase sigma factor 770 33.94 0 862543..862869 + 108 59713950 - VF_A0767 - cytochrome c-554(548) 771 38.52 0 862836..864068 - 410 59713951 - VF_A0768 - cysteine desulfhydrase 772 37.44 0 864052..864708 - 218 59713952 - VF_A0769 - agglutination protein 773 38.24 0 864938..866140 - 400 59713953 - VF_A0770 - bicyclomycin resistance protein 774 36.77 0 866219..867091 + 290 59713954 - VF_A0771 - LysR family transcriptional regulator 775 39.94 0 867186..867806 + 206 59713955 - VF_A0772 - homogentisate export protein 776 34.38 0 867839..868030 - 63 59713956 - VF_A0773 - hypothetical protein 777 38.82 0 868162..868908 + 248 59713957 ycdX VF_A0774 - putative hydrolase 778 36.40 0 868966..870138 - 390 59713958 - VF_A0775 - short chain dehydrogenase 779 40.42 0 870135..870755 - 206 59713959 - VF_A0776 - TonB protein 780 40.49 0 870755..871159 - 134 59713960 - VF_A0777 - TonB system transport protein ExbD2 781 41.39 +1 871156..871689 - 177 59713961 - VF_A0778 - TolQ protein 782 38.65 0 871689..873041 - 450 59713962 - VF_A0779 - TolQ protein 783 35.96 0 873043..873804 - 253 59713963 - VF_A0780 - hypothetical protein 784 39.53 0 873877..875892 - 671 59713964 - VF_A0781 - iron-hydroxamate transporter permease subunit 785 36.83 0 875895..876839 - 314 59713965 - VF_A0782 - ferrichrome-binding protein 786 37.50 0 876833..877600 - 255 59713966 - VF_A0783 - ferrichrome transport ATP-binding protein FhuC 787 37.24 0 877714..879912 - 732 59713967 fhuA VF_A0784 - ferrichrome outer membrane transporter 788 35.78 0 880057..880956 - 299 59713968 - VF_A0785 - AraC family transcriptional regulator 789 38.86 0 881096..882706 - 536 59713969 - VF_A0786 - PTS system, glucose-specific II BC component 790 40.27 0 883000..884571 - 523 59713970 ybiT VF_A0787 - ABC transporter ATP-binding protein 791 33.33 -1 884720..885124 - 134 59713971 - VF_A0788 - hypothetical protein 792 38.68 0 885354..885839 - 161 59713972 - VF_A0789 - lactoylglutathione lyase 793 38.51 0 886006..886662 - 218 59713973 - VF_A0790 - chloramphenicol acetyltransferase 794 35.86 0 886752..887660 + 302 59713974 - VF_A0791 - LysR family transcriptional regulator 795 37.59 0 887939..888784 - 281 59713975 - VF_A0792 - proline iminopeptidase 796 37.98 0 888886..889788 + 300 59713976 - VF_A0793 - LysR family transcriptional regulator 797 41.52 +1 889937..891133 - 398 59713977 ackA2 VF_A0794 - acetate kinase 798 33.94 0 891440..892435 + 331 59713978 - VF_A0795 - two component response regulator 799 36.45 0 892435..893397 + 320 59713979 adrA VF_A0796 - GGDEF domain-containing protein 800 40.85 0 893612..894502 - 296 59713980 malG VF_A0797 - maltose transporter permease 801 38.71 0 894571..896115 - 514 59713981 malF VF_A0798 - maltose transporter membrane protein 802 40.84 0 896261..897445 - 394 59713982 malE VF_A0799 - maltose ABC transporter periplasmic protein 803 41.26 +1 897854..898963 + 369 59713983 malK VF_A0800 - maltose/maltodextrin transporter ATP-binding protein 804 38.34 0 899076..901031 + 651 59713984 glgX VF_A0801 - glycogen debranching enzyme 805 37.69 0 901391..902332 - 313 59713985 cheV2 VF_A0802 - CheW/CheY hybrid protein CheV2 806 40.82 0 902525..903766 + 413 59713986 sstT VF_A0803 - serine/threonine transporter SstT 807 36.80 0 903838..904500 - 220 59713987 - VF_A0804 - permease 808 38.07 0 904628..906127 - 499 59713988 glgA VF_A0805 - glycogen synthase 809 37.44 0 906081..907298 - 405 59713989 glgC VF_A0806 - glucose-1-phosphate adenylyltransferase 810 33.64 0 907592..908245 + 217 59713990 - VF_A0807 - hypothetical protein 811 40.13 0 908344..910491 - 715 59713991 glgB VF_A0808 - glycogen branching enzyme 812 41.14 +1 910545..912761 - 738 172087815 malQ VF_A0809 - 4-alpha-glucanotransferase 813 39.85 0 912778..915231 - 817 59713993 malP VF_A0810 - maltodextrin phosphorylase 814 38.40 0 915627..918332 + 901 59713994 malT VF_A0811 - transcriptional regulator MalT 815 38.83 0 918423..919349 + 308 59713995 - VF_A0812 - integral membrane protein 816 39.10 0 919440..920288 - 282 59713996 focA VF_A0813 - formate transporter 817 33.33 -1 920457..920642 - 61 59713997 - VF_A0814 - hypothetical protein 818 33.33 -1 920693..921262 - 189 59713998 tag VF_A0815 - 3-methyl-adenine DNA glycosylase I, constitutive 819 34.91 0 921314..921820 + 168 59713999 - VF_A0816 - hypothetical protein 820 36.36 0 921817..922377 + 186 59714000 - VF_A0817 - Sco1-related protein 821 36.99 0 922358..922849 + 163 59714001 - VF_A0818 - hypothetical protein 822 40.53 0 923014..923847 + 277 59714002 - VF_A0819 - drug/metabolite exporter family protein 823 32.23 -1 923921..924466 - 181 59714003 rpoE3 VF_A0820 - RNA polymerase sigma factor SigZ 824 38.40 0 924577..925287 - 236 59714004 - VF_A0821 - glutathione S-transferase 825 33.33 -1 925424..925681 - 85 59714005 - VF_A0822 - hypothetical protein 826 43.27 +1 925784..926578 - 264 59714006 - VF_A0823 - vulnibactin utilization protein ViuB 827 37.53 0 926590..927351 - 253 59714007 vctC VF_A0824 - ferric anguibactin transport ATP-binding protein 828 34.81 0 927360..928310 - 316 59714008 - VF_A0825 - ferric anguibactin transport system permease protein FatC 829 36.33 0 928361..929194 - 277 59714009 vctD VF_A0826 - ferric anguibactin transport system permease protein FatD 830 35.76 0 929268..930173 - 301 59714010 vctP VF_A0827 - ferric anguibactin-binding protein 831 37.18 0 930385..930618 - 77 172087816 - VF_A1190 - hypothetical protein 832 37.47 0 930886..931248 - 120 59714011 - VF_A0828 - glutaredoxin 2 833 40.15 0 931434..932930 - 498 59714012 putP VF_A0829 - proline:sodium symporter 834 40.82 0 933040..933747 - 235 59714013 - VF_A0830 - delta-1-pyrroline-5-carboxylate dehydrogenase 835 41.11 +1 933762..936938 - 1058 172087817 putA VF_A0832 - proline dehydrogenase 836 32.44 -1 937098..937880 - 260 59714016 - VF_A0833 - AraC family transcriptional regulator 837 39.73 0 938314..940188 + 624 59714017 - VF_A0834 - NirV precursor 838 37.90 0 940344..941132 + 262 59714018 ybbM VF_A0835 - inner membrane protein 839 41.41 +1 941168..942220 + 350 59714019 tas VF_A0836 - oxidoreductase, NADP(H)-dependent aldo-keto reductase 840 37.66 0 942485..945538 - 1017 59714020 - VF_A0837 - putative ATPase involved in pili biogenesis 841 38.30 0 945861..946766 + 301 59714021 - VF_A0838 - hypothetical protein 842 41.32 +1 946838..947764 - 308 59714022 speB VF_A0839 - agmatinase 843 40.50 0 947764..949674 - 636 59714023 speA VF_A0840 - arginine decarboxylase 844 45.16 +2 949957..951216 + 419 59714024 - VF_A0841 - 3-hydroxy-3-methylglutaryl-coenzyme A reductase 845 35.40 0 951297..951827 - 176 59714025 blc VF_A0842 - outer membrane lipoprotein (lipocalin) 846 21.67 -2 951912..952031 - 39 59714026 - VF_A0843 - hypothetical protein 847 40.71 0 952063..953214 + 383 59714027 - VF_A0844 - outer membrane protein P1 precursor 848 38.54 0 953272..954078 - 268 59714028 - VF_A0845 - hypothetical protein 849 36.27 0 954299..955489 + 396 59714029 - VF_A0846 - hypothetical protein 850 39.63 0 955610..956944 - 444 59714030 astB VF_A0847 - succinylarginine dihydrolase 851 38.72 0 957269..958456 + 395 59714031 - VF_A0848 - hypothetical protein 852 40.42 0 958565..959425 - 286 59714032 yghU VF_A0849 - putative glutathione S-transferase YghU 853 36.38 0 959580..960431 + 283 59714033 - VF_A0850 - chloramphenicol-sensitive protein RarD 854 38.62 0 960418..961287 - 289 59714034 - VF_A0851 - transcriptional regulatory protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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