version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 683 39.57 0 752988..754895 + 635 59713865 - VF_A0682 - transporter 684 38.17 0 754889..756562 + 557 59713866 - VF_A0683 - hypothetical protein 685 37.37 0 756610..756708 - 32 59713867 - VF_A0684 - hypothetical protein 686 43.74 +1 756912..757862 + 316 59713868 talB VF_A0685 - transaldolase B 687 45.33 +2 758176..760167 + 663 59713869 tktB VF_A0686 - transketolase 688 38.25 0 760252..761187 - 311 59713870 htrB1 VF_A0687 - lipid A biosynthesis lauroyl acyltransferase 689 28.48 -2 761408..762190 - 260 59713871 - VF_A0688 - hypothetical protein 690 39.82 0 762407..763300 + 297 59713872 - VF_A0689 - hypothetical protein 691 39.49 0 763333..767424 + 1363 59713873 - VF_A0690 - hypothetical protein 692 36.23 0 767485..768141 - 218 59713874 nfsB VF_A0691 - dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive 693 33.56 0 768231..769550 - 439 59713875 - VF_A0692 - GGDEF domain-containing protein 694 38.38 0 769866..770063 + 65 59713876 - VF_A0693 - hypothetical protein 695 35.30 0 770256..770966 + 236 59713877 - VF_A0694 - hexapeptide repeat-containing transferase 696 43.01 +1 771042..772085 - 347 59713878 guaC VF_A0695 - guanosine 5'-monophosphate oxidoreductase 697 38.93 0 772546..773850 + 434 59713879 - VF_A0696 - inosine-guanosine kinase 698 38.35 0 773927..774205 - 92 59713880 ppiC VF_A0697 - peptidyl-prolyl cis-trans isomerase C (rotamase C) 699 37.79 0 774346..775242 + 298 59713881 cheV3 VF_A0698 - CheW/CheY hybrid protein CheV3 700 40.79 0 775364..776047 - 227 59713882 - VF_A0699 - nodulation protein N 701 41.29 +1 776488..777606 - 372 59713883 gcvT VF_A0700 - aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 702 39.42 0 777672..778328 - 218 59713884 - VF_A0701 - transcriptional regulator 703 41.73 +1 778596..778976 + 126 59713885 gcvH VF_A0702 - glycine cleavage system protein H 704 42.71 +1 779000..781867 + 955 59713886 gcvP VF_A0703 - glycine dehydrogenase 705 36.12 0 782181..782789 - 202 59713887 - VF_A0704 - hypothetical protein 706 40.56 0 782758..789201 - 2147 59713888 - VF_A0705 - hypothetical protein 707 36.87 0 790265..792298 + 677 59713889 - VF_A0706 - EAL domain-containing protein 708 39.63 0 792386..793258 - 290 59713890 - VF_A0707 - drug/metabolite exporter family protein 709 39.63 0 793340..794197 - 285 59713891 yijO VF_A0708 - DNA-binding transcriptional regulator 710 26.14 -2 794188..794340 - 50 172087812 - VF_A1188 - hypothetical protein 711 41.75 +1 794498..796399 + 633 59713892 - VF_A0709 - PTS system, mannose-specific IIAB component 712 38.51 0 796471..797667 + 398 59713893 manA VF_A0710 - mannose-6-phosphate isomerase 713 39.06 0 797847..798632 - 261 59713894 - VF_A0711 - PTS system, IIA component 714 36.33 0 798632..798931 - 99 59713895 - VF_A0712 - hypothetical protein 715 42.51 +1 799136..801031 + 631 59713896 frwC VF_A0713 - enzyme IIC component of PTS 716 38.98 0 801099..803417 - 772 59713897 - VF_A0714 - serine protease 717 41.98 +1 804162..807479 + 1105 59713898 - VF_A0715 - chitodextrinase precursor 718 36.05 0 808046..808192 - 48 59713899 - VF_A0716 - hypothetical protein 719 38.32 0 808534..809736 - 400 59713900 - VF_A0717 - putative lipoprotein 720 38.88 0 809736..810962 - 408 59713901 - VF_A0718 - hypothetical protein 721 37.11 0 811053..815894 - 1613 59713902 - VF_A0719 - hypothetical protein 722 39.10 0 815894..816985 - 363 59713903 - VF_A0720 - putative lipoprotein 723 36.17 0 816990..818684 - 564 59713904 - VF_A0721 - hypothetical protein 724 40.21 0 818936..820477 - 513 59713905 - VF_A0722 - sodium/proton antiporter 725 32.48 -1 820810..821280 + 156 59713906 - VF_A0723 - hypothetical protein 726 37.66 0 821281..822204 - 307 59713907 - VF_A0724 - LysR family transcriptional regulator 727 38.90 0 822303..823343 + 346 59713908 - VF_A0725 - choloylglycine hydrolase family protein 728 38.75 0 823420..824397 - 325 59713909 - VF_A0726 - NAD-dependent oxidoreductase 729 36.78 0 824428..824775 - 115 59713910 - VF_A0727 - putative cytoplasmic protein 730 37.28 0 824852..825130 - 92 59713911 - VF_A0728 - acetyltransferase 731 39.61 0 825171..826349 - 392 59713912 - VF_A0729 - major facilitator transporter 732 36.26 0 826434..827321 - 295 59713913 abgR VF_A0730 - DNA-binding transcriptional regulator 733 41.61 +1 827466..829097 + 543 59713914 treC VF_A0731 - trehalose-6-P hydrolase 734 37.06 0 829167..829970 - 267 59713915 - VF_A0732 - transcriptional regulator 735 38.18 0 829967..831019 - 350 59713916 - VF_A0733 - two component sensor histidine kinase 736 42.24 +1 831096..832274 - 392 59713917 - VF_A0734 - hypothetical protein 737 40.73 0 832277..833074 - 265 59713918 - VF_A0735 - hypothetical protein 738 41.77 +1 833067..834335 - 422 59713919 - VF_A0736 - ABC transporter permease protein 739 43.42 +1 834323..835006 - 227 59713920 - VF_A0737 - ABC transporter ATP-binding protein 740 43.15 +1 835016..835657 - 213 59713921 - VF_A0738 - hypothetical protein 741 41.62 +1 835843..836337 + 164 59713922 yhhY VF_A0739 - acetyltransferase 742 40.74 0 836414..836683 - 89 59713923 ybiI VF_A0740 - hypothetical protein 743 40.90 0 836867..837871 - 334 59713924 - VF_A0741 - hypothetical protein 744 38.30 0 837994..839019 - 341 59713925 - VF_A0742 - hypothetical protein 745 39.51 0 839032..840099 - 355 59713926 - VF_A0743 - multidrug resistance protein A 746 34.46 0 840214..841101 + 295 59713927 - VF_A0744 - LysR family transcriptional regulator 747 39.06 0 841432..842112 - 226 59713928 bioD VF_A0745 - dithiobiotin synthetase 748 38.93 0 842105..842926 - 273 59713929 bioC VF_A0746 - biotin biosynthesis protein BioC 749 42.19 +1 842933..844084 - 383 172087813 bioF VF_A0747 - 8-amino-7-oxononanoate synthase 750 41.79 +1 844068..845120 - 350 172087814 bioB VF_A1189 - biotin synthase 751 43.48 +1 845249..846529 + 426 59713931 bioA VF_A0748 - adenosylmethionine--8-amino-7-oxononanoate transaminase 752 33.33 -1 846605..846814 - 69 59713932 - VF_A0749 - hypothetical protein 753 38.53 0 846958..847515 - 185 59713933 rimJ VF_A0750 - ribosomal-protein-S5-alanine N-acetyltransferase 754 37.86 0 847527..849074 - 515 59713934 tyrR VF_A0751 - DNA-binding transcriptional regulator, tyrosine-binding 755 37.67 0 849209..850153 + 314 59713935 ybgA VF_A0752 - hypothetical protein 756 37.64 0 850143..851582 + 479 59713936 phr VF_A0753 - deoxyribodipyrimidine photolyase Phr, FAD-binding 757 37.65 0 851633..853486 + 617 59713937 - VF_A0754 - peptide-methionine (S)-S-oxide reductase 758 34.78 0 853512..853649 - 45 59713938 - VF_A0755 - hypothetical protein 759 38.71 0 853842..854789 + 315 59713939 - VF_A0756 - putative lipoprotein 760 38.15 0 854860..855378 - 172 59713940 - VF_A0757 - hypothetical protein 761 37.70 0 855378..855881 - 167 59713941 - VF_A0758 - hypothetical protein 762 38.25 0 855829..856398 - 189 59713942 - VF_A0759 - hypothetical protein 763 38.42 0 856484..857740 - 418 59713943 cfa VF_A0760 - cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) 764 36.65 0 857749..858501 - 250 59713944 - VF_A0761 - plasmid partition ParA protein 765 36.57 0 858498..859796 - 432 59713945 - VF_A0762 - putative dehydrogenase 766 37.25 0 859754..860494 - 246 59713946 - VF_A0763 - short chain dehydrogenase 767 33.55 0 860491..860958 - 155 59713947 - VF_A0764 - transcriptional regulator 768 38.01 0 861034..861717 - 227 59713948 chrR VF_A0765 - zinc-binding anti-sigmaE4 factor ChrR 769 37.42 0 861710..862321 - 203 59713949 rpoE4 VF_A0766 - RNA polymerase sigma factor 770 33.94 0 862543..862869 + 108 59713950 - VF_A0767 - cytochrome c-554(548) 771 38.52 0 862836..864068 - 410 59713951 - VF_A0768 - cysteine desulfhydrase 772 37.44 0 864052..864708 - 218 59713952 - VF_A0769 - agglutination protein 773 38.24 0 864938..866140 - 400 59713953 - VF_A0770 - bicyclomycin resistance protein 774 36.77 0 866219..867091 + 290 59713954 - VF_A0771 - LysR family transcriptional regulator 775 39.94 0 867186..867806 + 206 59713955 - VF_A0772 - homogentisate export protein 776 34.38 0 867839..868030 - 63 59713956 - VF_A0773 - hypothetical protein 777 38.82 0 868162..868908 + 248 59713957 ycdX VF_A0774 - putative hydrolase 778 36.40 0 868966..870138 - 390 59713958 - VF_A0775 - short chain dehydrogenase 779 40.42 0 870135..870755 - 206 59713959 - VF_A0776 - TonB protein 780 40.49 0 870755..871159 - 134 59713960 - VF_A0777 - TonB system transport protein ExbD2 781 41.39 +1 871156..871689 - 177 59713961 - VF_A0778 - TolQ protein 782 38.65 0 871689..873041 - 450 59713962 - VF_A0779 - TolQ protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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