version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 498 38.58 0 576890..577327 - 145 59713684 - VF_A0501 - hypothetical protein 499 37.80 0 577536..578162 + 208 59713685 - VF_A0502 - outer membrane protein 500 35.48 0 578216..578728 - 170 59713686 creA VF_A0503 - CreA family protein 501 34.52 0 579102..579524 + 140 59713687 - VF_A0504 - hypothetical protein 502 35.80 0 579566..580051 + 161 59713688 - VF_A0505 - hypothetical protein 503 35.57 0 580074..581819 + 581 59713689 - VF_A0506 - two component response regulator 504 37.09 0 581905..583128 - 407 59713690 gltS VF_A0507 - glutamate transporter 505 37.75 0 583349..584344 - 331 59713691 - VF_A0508 - hypothetical protein 506 38.70 0 584521..586347 - 608 59713692 - VF_A0509 - multidrug resistance ABC transporter ATP-binding and permease protein 507 37.25 0 586538..587506 + 322 59713693 - VF_A0510 - low-affinity zinc transport protein 508 40.32 0 587574..588518 - 314 59713694 - VF_A0511 - ribosomal biogenesis GTPase 509 39.54 0 588898..589203 + 101 59713695 - VF_A0512 - Phage integrase family protein 510 40.44 0 589236..589418 + 60 59713696 - VF_A0513 - DNA integration/recombination/invertion protein 511 24.00 -2 589544..590497 - 317 59713697 - VF_A0514 - hypothetical protein 512 30.28 -1 590932..591585 + 217 59713698 yagK VF_A0515 - prophage protein 513 36.18 0 591629..593068 - 479 59713699 - VF_A0516 - putative lipoprotein 514 32.94 -1 593087..593851 - 254 59713700 - VF_A0517 - hypothetical protein 515 37.50 0 594094..594429 - 111 59713701 - VF_A0518 - hypothetical protein 516 41.11 +1 594900..595799 - 299 59713702 - VF_A0519 - hypothetical protein 517 39.74 0 595895..596362 - 155 59713703 - VF_A0520 - hypothetical protein 518 41.44 +1 596427..596870 - 147 59713704 - VF_A0521 - hypothetical protein 519 41.77 +1 596870..597343 - 157 59713705 - VF_A0522 - DNA repair protein RadC 520 41.15 +1 597490..597681 + 63 59713706 - VF_A0523 - DNA-binding protein 521 42.73 +1 597774..598220 + 148 59713707 - VF_A0524 - ribonuclease H 522 26.95 -2 598645..599412 + 255 59713708 - VF_A0525 - AraC family transcriptional regulator 523 24.14 -2 599443..600312 + 289 59713709 - VF_A0526 - GGDEF domain-containing protein 524 26.38 -2 600595..602205 + 536 59713710 - VF_A0527 - methyl-accepting chemotaxis protein 525 30.47 -1 602634..604277 + 547 59713711 - VF_A0528 - methyl-accepting chemotaxis protein 526 36.60 0 604839..605573 + 244 59713712 pnuC VF_A0529 - nicotinamide mononucleotide transporter 527 40.00 0 605570..606304 + 244 59713713 - VF_A0530 - uridine phosphorylase 528 35.53 0 606435..607118 + 227 59713714 - VF_A0531 - hypothetical protein 529 40.28 0 607308..607451 + 47 59713715 - VF_A0532 - hypothetical protein 530 35.44 0 607543..609771 + 742 59713716 - VF_A0533 - hypothetical protein 531 36.84 0 610063..610233 + 56 59713717 - VF_A0534 - hypothetical protein 532 40.89 0 610230..611711 + 493 59713718 hsdM VF_A0535 - DNA methylase M 533 40.44 0 611708..613579 + 623 59713719 - VF_A0536 - hypothetical protein 534 40.49 0 613576..615042 + 488 59713720 - VF_A0537 - type I restriction-modification system methylation subunit 535 34.56 0 615042..616262 + 406 59713721 - VF_A0538 - type I restriction-modification system specificity subunit 536 41.18 +1 616265..619258 + 997 59713722 - VF_A0539 - type I restriction-modification system restriction subunit 537 37.71 0 619283..620608 + 441 59713723 - VF_A0540 - hypothetical protein 538 37.70 0 621001..622650 + 549 59713724 - VF_A0541 - hypothetical protein 539 40.71 0 622655..626719 + 1354 59713725 - VF_A0542 - superfamily I DNA helicase 540 37.30 0 626716..627219 + 167 59713726 - VF_A0543 - hypothetical protein 541 38.58 0 627213..627479 + 88 59713727 - VF_A0544 - hypothetical protein 542 39.89 0 627490..628893 + 467 59713728 - VF_A0545 - putative cytoplasmic protein 543 39.26 0 628883..629860 + 325 59713729 - VF_A0546 - hypothetical protein 544 36.55 0 629853..630443 + 196 59713730 - VF_A0547 - hypothetical protein 545 38.50 0 630681..631880 - 399 59713731 intA VF_A0548 - phage family integrase 546 39.78 0 632237..632686 - 149 59713732 - VF_A0549 - putative lipoprotein 547 40.58 0 632699..634810 - 703 59713733 - VF_A0550 - putative cytoplasmic protein 548 35.96 0 635125..635925 - 266 59713734 - VF_A0551 - EAL domain-containing protein 549 39.61 0 636076..636903 - 275 59713735 - VF_A0552 - putative cytoplasmic protein 550 38.83 0 637049..638431 + 460 59713736 - VF_A0553 - ATP-dependent RNA helicase 551 35.46 0 638577..638858 - 93 59713737 - VF_A0554 - putative cytoplasmic protein 552 36.90 0 638920..639732 - 270 59713738 - VF_A0555 - phosphate-binding protein 553 36.45 0 639795..640595 - 266 59713739 - VF_A0556 - hypothetical protein 554 36.08 0 640722..642434 + 570 59713740 sgrR VF_A0557 - DNA-binding transcriptional regulator 555 36.85 0 642482..643447 - 321 59713741 - VF_A0558 - coproporphyrinogen III oxidase 556 35.96 0 643535..643801 + 88 59713742 - VF_A0559 - hypothetical protein 557 37.00 0 643933..645378 + 481 59713743 - VF_A0560 - two component sensor histidine kinase 558 39.12 0 645353..646009 + 218 59713744 - VF_A0561 - two component response regulator 559 34.76 0 646014..646922 + 302 59713745 - VF_A0562 - hypothetical protein 560 37.04 0 646922..647083 + 53 59713746 - VF_A0563 - hypothetical protein 561 39.75 0 647250..648449 + 399 59713747 - VF_A0564 - TraF protein 562 37.99 0 648528..649064 + 178 59713748 mog VF_A0565 - molybdenum cofactor biosynthesis protein 563 32.44 -1 649096..649320 - 74 59713749 - VF_A0566 - hypothetical protein 564 34.50 0 649637..651601 + 654 59713750 ydaM VF_A0567 - GGDEF domain-containing protein 565 30.86 -1 651702..651782 + 26 172087807 - VF_A1183 - hypothetical protein 566 39.60 0 651891..654569 - 892 59713751 yfiQ VF_A0568 - fused acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit 567 39.04 0 654794..655354 + 186 59713752 - VF_A0569 - hypothetical protein 568 37.66 0 655406..656398 + 330 59713753 ddlA VF_A0570 - D-alanyl-alanine synthetase A 569 35.08 0 656429..657343 - 304 59713754 - VF_A0571 - DNA integration/recombination/invertion protein 570 34.47 0 657487..657837 + 116 59713755 - VF_A0572 - minor tail protein 571 40.38 0 657877..658188 + 103 59713756 yciH VF_A0573 - translation initiation factor Sui1 572 40.74 0 658717..658824 - 35 59713757 - VF_A0574 - hypothetical protein 573 40.74 0 659275..659382 - 35 59713758 - VF_A0575 - hypothetical protein 574 39.66 0 659901..661085 - 394 59713759 zot VF_A0576 - zona occludens toxin 575 29.12 -2 661082..661366 - 94 59713760 ace VF_A0577 - enterotoxin 576 35.24 0 661373..662578 - 401 59713761 orfU VF_A0578 - OrfU 577 41.46 +1 662694..662939 - 81 172087808 cep VF_A1184 - Cep 578 31.50 -1 663082..663408 - 108 59713763 rstB VF_A0580 - RstB2 protein 579 37.49 0 663411..664565 - 384 59713764 rstA VF_A0581 - RstA2 protein 580 30.06 -1 664687..665022 + 111 59713765 rstR VF_A0582 - transcriptional repressor rstR 581 36.20 0 666012..666290 + 92 172087809 - VF_A1185 - hypothetical protein 582 35.33 0 666343..666492 - 49 172087810 - VF_A1186 - hypothetical protein 583 39.68 0 666784..667350 + 188 59713766 - VF_A0583 - hypothetical protein 584 36.79 0 667426..668004 - 192 59713767 - VF_A0584 - hypothetical protein 585 43.36 +1 668217..669593 - 458 59713768 pntB VF_A0585 - pyridine nucleotide transhydrogenase 586 43.10 +1 669605..671161 - 518 59713769 pntA VF_A0586 - NAD(P) transhydrogenase subunit alpha 587 38.41 0 671420..671695 - 91 59713770 - VF_A0587 - transcriptional activator HlyU 588 37.48 0 671775..672329 - 184 59713771 - VF_A0588 - OmpA family domain-containing protein 589 37.24 0 672439..673563 - 374 59713772 - VF_A0589 - integral membrane protein 590 36.71 0 673567..674691 - 374 59713773 - VF_A0590 - daunorubicin resistance transmembrane protein 591 39.33 0 674711..675694 - 327 59713774 - VF_A0591 - multidrug resistance protein A 592 38.26 0 675699..677057 - 452 59713775 - VF_A0592 - type I secretion outer membrane protein 593 38.10 0 677153..677614 - 153 59713776 luxT VF_A0593 - LuxT transcriptional regulator 594 35.02 0 678072..678368 + 98 59713777 - VF_A0594 - hypothetical protein 595 40.10 0 678438..678644 - 68 59713778 - VF_A0595 - cold shock protein 596 34.31 0 678842..679456 + 204 59713779 - VF_A0596 - hypothetical protein 597 38.35 0 679484..680419 + 311 59713780 - VF_A0597 - LysR family transcriptional regulator 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0