version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 451 39.79 0 520710..521762 - 350 59713635 hutG VF_A0452 - formimidoylglutamase 452 40.51 0 521737..522963 - 408 59713636 hutI VF_A0453 - imidazolonepropionase 453 34.90 0 523147..523848 - 233 59713637 hutC VF_A0454 - histidine utilization repressor 454 35.05 0 523991..524629 + 212 59713638 - VF_A0455 - hypothetical protein 455 39.45 0 524697..525170 - 157 59713639 - VF_A0456 - peptidyl-prolyl cis-trans isomerase 456 38.21 0 525195..525830 - 211 59713640 - VF_A0457 - putative lipoprotein 457 38.05 0 525937..526827 - 296 59713641 - VF_A0458 - hypothetical protein 458 41.55 +1 526917..530372 - 1151 172087806 mfd VF_A0460 - transcription-repair coupling factor 459 38.07 0 530388..530957 - 189 59713644 - VF_A0461 - hypothetical protein 460 40.86 0 531125..532333 + 402 59713645 lolC VF_A0462 - outer membrane-specific lipoprotein transporter subunit 461 41.98 +1 532326..533042 + 238 59713646 lolD VF_A0463 - outer membrane-specific lipoprotein transporter subunit 462 41.12 +1 533042..534286 + 414 59713647 lolE VF_A0464 - outer membrane-specific lipoprotein transporter subunit LolE 463 34.52 0 534451..535800 + 449 59713648 - VF_A0465 - hypothetical protein 464 35.91 0 537118..538164 + 348 59713650 - VF_A0467 - permease 465 38.19 0 538302..539804 + 500 59713651 zwf VF_A0468 - glucose-6-phosphate 1-dehydrogenase 466 37.76 0 539801..540523 + 240 59713652 - VF_A0469 - 6-phosphogluconolactonase 467 38.99 0 540560..542008 + 482 59713653 gnd VF_A0470 - 6-phosphogluconate dehydrogenase 468 37.39 0 542082..542747 - 221 59713654 yqjA VF_A0471 - inner membrane protein 469 34.13 0 543371..543994 + 207 59713655 - VF_A0472 - transporter 470 27.45 -2 544305..544916 + 203 59713656 tcpP VF_A0473 - transcriptional regulatory protein TcpP 471 25.64 -2 544913..545302 + 129 59713657 tcpH VF_A0474 - TcpH protein 472 29.79 -1 545355..547046 + 563 59713658 - VF_A0475 - GGDEF domain-containing protein 473 27.92 -2 547097..548389 + 430 59713659 - VF_A0476 - GGDEF domain-containing protein 474 36.36 0 548510..549862 + 450 59713660 - VF_A0477 - hypothetical protein 475 34.86 0 549862..551175 + 437 59713661 - VF_A0478 - N-acetylglucosaminyltransferase 476 32.85 -1 551181..552224 + 347 59713662 - VF_A0479 - hypothetical protein 477 23.29 -2 552293..552541 + 82 59713663 - VF_A0480 - hypothetical protein 478 32.06 -1 552592..554235 + 547 59713664 - VF_A0481 - methyl-accepting chemotaxis protein 479 36.93 0 554294..555517 - 407 59713665 - VF_A0482 - sodium/glutamate symporter 480 41.89 +1 555673..556770 - 365 59713666 - VF_A0483 - rod shape-determining protein RodA 481 38.76 0 556957..558687 - 576 59713667 - VF_A0484 - ribosomal large subunit pseudouridine synthase A 482 39.21 0 558668..560368 - 566 59713668 - VF_A0485 - ribosomal large subunit pseudouridine synthase A 483 34.60 0 560503..560739 - 78 59713669 - VF_A0486 - hypothetical protein 484 38.64 0 560885..561808 - 307 59713670 ompU2 VF_A0487 - outer membrane protein U paralog, OmpU2 485 37.21 0 561982..562857 - 291 59713671 - VF_A0488 - hypothetical protein 486 35.48 0 563023..563955 - 310 59713672 - VF_A0489 - LysR family transcriptional regulator 487 35.54 0 564064..565059 + 331 59713673 - VF_A0490 - soluble lytic murein transglycosylase 488 34.93 0 565069..566073 + 334 59713674 - VF_A0491 - soluble lytic murein transglycosylase 489 40.94 0 566145..567248 - 367 59713675 anmK VF_A0492 - anhydro-N-acetylmuramic acid kinase 490 41.47 +1 567421..568416 + 331 59713676 nagZ VF_A0493 - beta-hexosaminidase 491 43.85 +1 568497..569942 - 481 59713677 pykA VF_A0494 - pyruvate kinase II 492 39.79 0 570044..570724 - 226 59713678 ygcF VF_A0495 - hypothetical protein 493 39.75 0 570908..572122 + 404 59713679 dgsA VF_A0496 - DNA-binding transcriptional repressor 494 40.60 0 572200..573204 - 334 59713680 - VF_A0497 - L-allo-threonine aldolase 495 38.00 0 573487..575136 + 549 59713681 ravA VF_A0498 - MoxR-like ATPase, regulatory ATPase variant A, RavA 496 37.82 0 575155..576603 + 482 59713682 viaA VF_A0499 - hypothetical protein 497 40.74 0 576604..576846 - 80 59713683 - VF_A0500 - hypothetical protein 498 38.58 0 576890..577327 - 145 59713684 - VF_A0501 - hypothetical protein 499 37.80 0 577536..578162 + 208 59713685 - VF_A0502 - outer membrane protein 500 35.48 0 578216..578728 - 170 59713686 creA VF_A0503 - CreA family protein 501 34.52 0 579102..579524 + 140 59713687 - VF_A0504 - hypothetical protein 502 35.80 0 579566..580051 + 161 59713688 - VF_A0505 - hypothetical protein 503 35.57 0 580074..581819 + 581 59713689 - VF_A0506 - two component response regulator 504 37.09 0 581905..583128 - 407 59713690 gltS VF_A0507 - glutamate transporter 505 37.75 0 583349..584344 - 331 59713691 - VF_A0508 - hypothetical protein 506 38.70 0 584521..586347 - 608 59713692 - VF_A0509 - multidrug resistance ABC transporter ATP-binding and permease protein 507 37.25 0 586538..587506 + 322 59713693 - VF_A0510 - low-affinity zinc transport protein 508 40.32 0 587574..588518 - 314 59713694 - VF_A0511 - ribosomal biogenesis GTPase 509 39.54 0 588898..589203 + 101 59713695 - VF_A0512 - Phage integrase family protein 510 40.44 0 589236..589418 + 60 59713696 - VF_A0513 - DNA integration/recombination/invertion protein 511 24.00 -2 589544..590497 - 317 59713697 - VF_A0514 - hypothetical protein 512 30.28 -1 590932..591585 + 217 59713698 yagK VF_A0515 - prophage protein 513 36.18 0 591629..593068 - 479 59713699 - VF_A0516 - putative lipoprotein 514 32.94 -1 593087..593851 - 254 59713700 - VF_A0517 - hypothetical protein 515 37.50 0 594094..594429 - 111 59713701 - VF_A0518 - hypothetical protein 516 41.11 +1 594900..595799 - 299 59713702 - VF_A0519 - hypothetical protein 517 39.74 0 595895..596362 - 155 59713703 - VF_A0520 - hypothetical protein 518 41.44 +1 596427..596870 - 147 59713704 - VF_A0521 - hypothetical protein 519 41.77 +1 596870..597343 - 157 59713705 - VF_A0522 - DNA repair protein RadC 520 41.15 +1 597490..597681 + 63 59713706 - VF_A0523 - DNA-binding protein 521 42.73 +1 597774..598220 + 148 59713707 - VF_A0524 - ribonuclease H 522 26.95 -2 598645..599412 + 255 59713708 - VF_A0525 - AraC family transcriptional regulator 523 24.14 -2 599443..600312 + 289 59713709 - VF_A0526 - GGDEF domain-containing protein 524 26.38 -2 600595..602205 + 536 59713710 - VF_A0527 - methyl-accepting chemotaxis protein 525 30.47 -1 602634..604277 + 547 59713711 - VF_A0528 - methyl-accepting chemotaxis protein 526 36.60 0 604839..605573 + 244 59713712 pnuC VF_A0529 - nicotinamide mononucleotide transporter 527 40.00 0 605570..606304 + 244 59713713 - VF_A0530 - uridine phosphorylase 528 35.53 0 606435..607118 + 227 59713714 - VF_A0531 - hypothetical protein 529 40.28 0 607308..607451 + 47 59713715 - VF_A0532 - hypothetical protein 530 35.44 0 607543..609771 + 742 59713716 - VF_A0533 - hypothetical protein 531 36.84 0 610063..610233 + 56 59713717 - VF_A0534 - hypothetical protein 532 40.89 0 610230..611711 + 493 59713718 hsdM VF_A0535 - DNA methylase M 533 40.44 0 611708..613579 + 623 59713719 - VF_A0536 - hypothetical protein 534 40.49 0 613576..615042 + 488 59713720 - VF_A0537 - type I restriction-modification system methylation subunit 535 34.56 0 615042..616262 + 406 59713721 - VF_A0538 - type I restriction-modification system specificity subunit 536 41.18 +1 616265..619258 + 997 59713722 - VF_A0539 - type I restriction-modification system restriction subunit 537 37.71 0 619283..620608 + 441 59713723 - VF_A0540 - hypothetical protein 538 37.70 0 621001..622650 + 549 59713724 - VF_A0541 - hypothetical protein 539 40.71 0 622655..626719 + 1354 59713725 - VF_A0542 - superfamily I DNA helicase 540 37.30 0 626716..627219 + 167 59713726 - VF_A0543 - hypothetical protein 541 38.58 0 627213..627479 + 88 59713727 - VF_A0544 - hypothetical protein 542 39.89 0 627490..628893 + 467 59713728 - VF_A0545 - putative cytoplasmic protein 543 39.26 0 628883..629860 + 325 59713729 - VF_A0546 - hypothetical protein 544 36.55 0 629853..630443 + 196 59713730 - VF_A0547 - hypothetical protein 545 38.50 0 630681..631880 - 399 59713731 intA VF_A0548 - phage family integrase 546 39.78 0 632237..632686 - 149 59713732 - VF_A0549 - putative lipoprotein 547 40.58 0 632699..634810 - 703 59713733 - VF_A0550 - putative cytoplasmic protein 548 35.96 0 635125..635925 - 266 59713734 - VF_A0551 - EAL domain-containing protein 549 39.61 0 636076..636903 - 275 59713735 - VF_A0552 - putative cytoplasmic protein 550 38.83 0 637049..638431 + 460 59713736 - VF_A0553 - ATP-dependent RNA helicase 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0