version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 410 38.36 0 464061..464975 + 304 59713594 ydhF VF_A0411 - oxidoreductase 411 40.04 0 465059..466087 - 342 59713595 pyrC VF_A0412 - dihydroorotase 412 36.87 0 466371..466568 + 65 59713596 - VF_A0413 - hypothetical protein 413 37.49 0 466959..469289 + 776 59713597 - VF_A0414 - ATP-dependent protease (Lon-like) 414 34.15 0 469485..470714 + 409 59713598 - VF_A0415 - hypothetical protein 415 34.50 0 470789..471130 - 113 59713599 - VF_A0416 - DOPA 4,5-dioxygenase 416 42.05 +1 471213..472244 - 343 59713600 tdh VF_A0417 - L-threonine 3-dehydrogenase 417 41.52 +1 472244..473440 - 398 59713601 kbl VF_A0418 - 2-amino-3-ketobutyrate coenzyme A ligase 418 36.22 0 473563..474498 + 311 59713602 - VF_A0419 - LysR family transcriptional regulator 419 35.98 0 474485..474862 + 125 59713603 - VF_A0420 - hypothetical protein 420 37.46 0 481259..482179 + 306 59713604 - VF_A0421 - putative manganese-dependent inorganic pyrophosphatase 421 35.95 0 482242..482394 - 50 172087804 - VF_A1181 - hypothetical protein 422 41.14 +1 482650..483174 - 174 59713605 - VF_A0422 - hypothetical protein 423 34.03 0 483181..485484 + 767 59713606 ycaI VF_A0423 - putative recombination protein 424 38.77 0 485519..487267 + 582 59713607 msbA VF_A0424 - lipid transporter ATP-binding/permease protein 425 39.01 0 487267..488253 + 328 59713608 lpxK VF_A0425 - tetraacyldisaccharide 4'-kinase 426 38.89 0 488255..488452 + 65 59713609 - VF_A0426 - cytosolic protein 427 43.20 +1 488434..489183 + 249 59713610 kdsB VF_A0427 - 3-deoxy-manno-octulosonate cytidylyltransferase 428 38.66 0 489252..490115 - 287 59713611 ycbC VF_A0428 - inner membrane protein 429 38.46 0 490251..491030 + 259 59713612 smtA VF_A0429 - putative metallothionein SmtA 430 41.26 +1 491056..492393 + 445 59713613 mukF VF_A0430 - condesin subunit F 431 39.84 0 492374..493111 + 245 59713614 mukE VF_A0431 - condesin subunit E 432 41.73 +1 493114..497580 + 1488 172087805 mukB VF_A0432 - fused chromosome partitioning protein: nucleotide hydrolase 433 35.92 0 497694..498311 + 205 59713617 - VF_A0434 - DnaJ-related protein 434 37.93 0 498318..499667 - 449 59713618 - VF_A0435 - two component sensor histidine kinase 435 36.14 0 499648..500325 - 225 59713619 - VF_A0436 - putative transcriptional regulatory protein 436 36.07 0 500566..500967 + 133 59713620 - VF_A0437 - hypothetical protein 437 40.67 0 501042..502499 - 485 59713621 nagE2 VF_A0438 - fused N-acetyl glucosamine specific PTS enzyme: IIC and IIB components 438 40.34 0 502654..503838 - 394 59713622 nnrS VF_A0439 - nitrite and/or nitric oxide reductase 439 39.06 0 504037..504891 + 284 59713623 - VF_A0440 - esterase/lipase 440 36.32 0 504985..506022 - 345 59713624 - VF_A0441 - hypothetical protein 441 36.36 0 506224..506619 + 131 59713625 - VF_A0442 - hypothetical protein 442 37.30 0 506795..508129 + 444 59713626 cusC VF_A0443 - copper/silver resistance outer membrane protein 443 39.46 0 508140..509609 + 489 59713627 cusB VF_A0444 - copper/silver efflux system, membrane fusion protein 444 41.12 +1 509606..512725 + 1039 59713628 cusA VF_A0445 - copper/silver efflux system, membrane component 445 39.45 0 512823..513329 + 168 59713629 cusF VF_A0446 - copper-binding protein 446 37.75 0 513408..515036 - 542 59713630 - VF_A0447 - methyl-accepting chemotaxis protein 447 37.81 0 515255..516883 - 542 59713631 - VF_A0448 - methyl-accepting chemotaxis protein 448 33.74 0 517067..517312 - 81 59713632 - VF_A0449 - hypothetical protein 449 42.40 +1 517423..518955 - 510 59713633 hutH VF_A0450 - histidine ammonia-lyase 450 43.89 +1 518997..520691 - 564 59713634 hutU VF_A0451 - urocanate hydratase 451 39.79 0 520710..521762 - 350 59713635 hutG VF_A0452 - formimidoylglutamase 452 40.51 0 521737..522963 - 408 59713636 hutI VF_A0453 - imidazolonepropionase 453 34.90 0 523147..523848 - 233 59713637 hutC VF_A0454 - histidine utilization repressor 454 35.05 0 523991..524629 + 212 59713638 - VF_A0455 - hypothetical protein 455 39.45 0 524697..525170 - 157 59713639 - VF_A0456 - peptidyl-prolyl cis-trans isomerase 456 38.21 0 525195..525830 - 211 59713640 - VF_A0457 - putative lipoprotein 457 38.05 0 525937..526827 - 296 59713641 - VF_A0458 - hypothetical protein 458 41.55 +1 526917..530372 - 1151 172087806 mfd VF_A0460 - transcription-repair coupling factor 459 38.07 0 530388..530957 - 189 59713644 - VF_A0461 - hypothetical protein 460 40.86 0 531125..532333 + 402 59713645 lolC VF_A0462 - outer membrane-specific lipoprotein transporter subunit 461 41.98 +1 532326..533042 + 238 59713646 lolD VF_A0463 - outer membrane-specific lipoprotein transporter subunit 462 41.12 +1 533042..534286 + 414 59713647 lolE VF_A0464 - outer membrane-specific lipoprotein transporter subunit LolE 463 34.52 0 534451..535800 + 449 59713648 - VF_A0465 - hypothetical protein 464 35.91 0 537118..538164 + 348 59713650 - VF_A0467 - permease 465 38.19 0 538302..539804 + 500 59713651 zwf VF_A0468 - glucose-6-phosphate 1-dehydrogenase 466 37.76 0 539801..540523 + 240 59713652 - VF_A0469 - 6-phosphogluconolactonase 467 38.99 0 540560..542008 + 482 59713653 gnd VF_A0470 - 6-phosphogluconate dehydrogenase 468 37.39 0 542082..542747 - 221 59713654 yqjA VF_A0471 - inner membrane protein 469 34.13 0 543371..543994 + 207 59713655 - VF_A0472 - transporter 470 27.45 -2 544305..544916 + 203 59713656 tcpP VF_A0473 - transcriptional regulatory protein TcpP 471 25.64 -2 544913..545302 + 129 59713657 tcpH VF_A0474 - TcpH protein 472 29.79 -1 545355..547046 + 563 59713658 - VF_A0475 - GGDEF domain-containing protein 473 27.92 -2 547097..548389 + 430 59713659 - VF_A0476 - GGDEF domain-containing protein 474 36.36 0 548510..549862 + 450 59713660 - VF_A0477 - hypothetical protein 475 34.86 0 549862..551175 + 437 59713661 - VF_A0478 - N-acetylglucosaminyltransferase 476 32.85 -1 551181..552224 + 347 59713662 - VF_A0479 - hypothetical protein 477 23.29 -2 552293..552541 + 82 59713663 - VF_A0480 - hypothetical protein 478 32.06 -1 552592..554235 + 547 59713664 - VF_A0481 - methyl-accepting chemotaxis protein 479 36.93 0 554294..555517 - 407 59713665 - VF_A0482 - sodium/glutamate symporter 480 41.89 +1 555673..556770 - 365 59713666 - VF_A0483 - rod shape-determining protein RodA 481 38.76 0 556957..558687 - 576 59713667 - VF_A0484 - ribosomal large subunit pseudouridine synthase A 482 39.21 0 558668..560368 - 566 59713668 - VF_A0485 - ribosomal large subunit pseudouridine synthase A 483 34.60 0 560503..560739 - 78 59713669 - VF_A0486 - hypothetical protein 484 38.64 0 560885..561808 - 307 59713670 ompU2 VF_A0487 - outer membrane protein U paralog, OmpU2 485 37.21 0 561982..562857 - 291 59713671 - VF_A0488 - hypothetical protein 486 35.48 0 563023..563955 - 310 59713672 - VF_A0489 - LysR family transcriptional regulator 487 35.54 0 564064..565059 + 331 59713673 - VF_A0490 - soluble lytic murein transglycosylase 488 34.93 0 565069..566073 + 334 59713674 - VF_A0491 - soluble lytic murein transglycosylase 489 40.94 0 566145..567248 - 367 59713675 anmK VF_A0492 - anhydro-N-acetylmuramic acid kinase 490 41.47 +1 567421..568416 + 331 59713676 nagZ VF_A0493 - beta-hexosaminidase 491 43.85 +1 568497..569942 - 481 59713677 pykA VF_A0494 - pyruvate kinase II 492 39.79 0 570044..570724 - 226 59713678 ygcF VF_A0495 - hypothetical protein 493 39.75 0 570908..572122 + 404 59713679 dgsA VF_A0496 - DNA-binding transcriptional repressor 494 40.60 0 572200..573204 - 334 59713680 - VF_A0497 - L-allo-threonine aldolase 495 38.00 0 573487..575136 + 549 59713681 ravA VF_A0498 - MoxR-like ATPase, regulatory ATPase variant A, RavA 496 37.82 0 575155..576603 + 482 59713682 viaA VF_A0499 - hypothetical protein 497 40.74 0 576604..576846 - 80 59713683 - VF_A0500 - hypothetical protein 498 38.58 0 576890..577327 - 145 59713684 - VF_A0501 - hypothetical protein 499 37.80 0 577536..578162 + 208 59713685 - VF_A0502 - outer membrane protein 500 35.48 0 578216..578728 - 170 59713686 creA VF_A0503 - CreA family protein 501 34.52 0 579102..579524 + 140 59713687 - VF_A0504 - hypothetical protein 502 35.80 0 579566..580051 + 161 59713688 - VF_A0505 - hypothetical protein 503 35.57 0 580074..581819 + 581 59713689 - VF_A0506 - two component response regulator 504 37.09 0 581905..583128 - 407 59713690 gltS VF_A0507 - glutamate transporter 505 37.75 0 583349..584344 - 331 59713691 - VF_A0508 - hypothetical protein 506 38.70 0 584521..586347 - 608 59713692 - VF_A0509 - multidrug resistance ABC transporter ATP-binding and permease protein 507 37.25 0 586538..587506 + 322 59713693 - VF_A0510 - low-affinity zinc transport protein 508 40.32 0 587574..588518 - 314 59713694 - VF_A0511 - ribosomal biogenesis GTPase 509 39.54 0 588898..589203 + 101 59713695 - VF_A0512 - Phage integrase family protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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