version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 227 33.83 0 246113..247330 + 405 59713405 - VF_A0222 - ATPase involved in chromosome partitioning 228 39.08 0 247333..248619 + 428 59713406 tadA2 VF_A0223 - putative type IV secretion NTPase 229 33.98 0 248616..249539 + 307 59713407 tadB2 VF_A0224 - TadB-like protein involved in pilus formation and/or protein secretion 230 33.00 -1 249509..250420 + 303 59713408 tadC2 VF_A0225 - bipartite nuclear localization signal containing protein 231 30.78 -1 250410..251153 + 247 59713409 tadD2 VF_A0226 - TPR repeat-containing protein 232 35.17 0 251158..251646 + 162 59713410 tadE2 VF_A0227 - TadE-like protein 233 35.93 0 251630..252169 + 179 59713411 tadF2 VF_A0228 - ATP/GTP-binding motif-containing protein 234 38.76 0 252171..253442 + 423 59713412 tadG2 VF_A0229 - TadG-like protein 235 32.94 -1 253482..254243 + 253 59713413 - VF_A0230 - outer membrane protein 236 26.10 -2 254364..254999 + 211 59713414 - VF_A0231 - hypothetical protein 237 24.24 -2 254953..255414 + 153 59713415 - VF_A0232 - hypothetical protein 238 28.54 -2 255417..257627 - 736 59713416 - VF_A0233 - hypothetical protein 239 28.28 -2 257646..258041 - 131 59713417 - VF_A0234 - hypothetical protein 240 41.40 +1 258428..259282 + 284 59713418 glpF VF_A0235 - glycerol uptake facilitator protein GlpF 241 41.98 +1 259348..260862 + 504 59713419 glpK VF_A0236 - glycerol kinase 242 31.72 -1 260932..263715 - 927 59713420 rscS VF_A0237 - hybrid sensor kinase RscS 243 35.42 0 264297..265064 + 255 59713421 glpR VF_A0238 - glycerol-3-phosphate regulon repressor protein GlpR 244 37.66 0 265242..266789 + 515 59713422 glpD VF_A0239 - glycerol-3-phosphate dehydrogenase 245 27.09 -2 266819..267940 - 373 59713423 - VF_A0240 - SUA5 protein 246 37.37 0 268451..269539 + 362 59713424 - VF_A0241 - choloylglycine hydrolase 247 31.40 -1 269561..271267 - 568 172087797 - VF_A0244 - GGDEF/EAL domain-containing protein 248 29.24 -2 271588..271758 + 56 59713428 - VF_A0245 - hypothetical protein 249 35.85 0 271886..273751 + 621 59713429 - VF_A0246 - methyl-accepting chemotaxis protein 250 30.67 -1 273794..274957 - 387 59713430 - VF_A0247 - SUA5 protein 251 37.34 0 275235..276506 - 423 59713431 glpC VF_A0248 - sn-glycerol-3-phosphate dehydrogenase subunit C 252 39.77 0 276503..277870 - 455 59713432 glpB VF_A0249 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 253 42.23 +1 277867..279519 - 550 59713433 glpA VF_A0250 - sn-glycerol-3-phosphate dehydrogenase subunit A 254 42.58 +1 279815..283978 + 1387 172087798 fdhF VF_A0251 - formate dehydrogenase-H 255 40.73 0 284061..285290 - 409 59713436 pepT VF_A0253 - peptidase T 256 36.48 0 285425..285805 - 126 59713437 - VF_A0254 - putative lipoprotein 257 37.52 0 286358..287146 + 262 59713438 yeaM VF_A0255 - DNA-binding transcriptional regulator 258 34.40 0 287408..287782 + 124 59713439 - VF_A0256 - hypothetical protein 259 35.78 0 287878..288489 - 203 59713440 - VF_A0257 - malate synthase 260 39.45 0 288598..290100 + 500 59713441 - VF_A0258 - MerR family transcriptional regulator 261 28.88 -2 290138..291238 - 366 59713442 - VF_A0259 - transcriptional regulator 262 39.80 0 291668..293584 - 638 59713443 - VF_A0260 - glutathione-regulated potassium-efflux system protein KefC 263 36.73 0 293592..294209 - 205 59713444 - VF_A0261 - modulator of glutathione-dependent potassium efflux system 264 37.58 0 294325..294654 - 109 59713445 - VF_A0262 - quaternary ammonium compound-resistance protein 265 38.48 0 294813..295220 - 135 59713446 - VF_A0263 - hypothetical protein 266 38.45 0 295353..296564 - 403 59713447 ycbX VF_A0264 - 2Fe-2S cluster-containing protein 267 36.12 0 296576..297832 - 418 59713448 - VF_A0265 - two component sensor histidine kinase 268 36.64 0 297807..298472 - 221 59713449 - VF_A0266 - transcriptional regulator 269 35.25 0 298554..299438 + 294 59713450 - VF_A0267 - hypothetical protein 270 37.40 0 299582..300490 + 302 59713451 yedI VF_A0268 - inner membrane protein 271 40.27 0 300493..300867 - 124 59713452 - VF_A0269 - putative lipoprotein 272 36.50 0 302049..303059 - 336 59713455 - VF_A0272 - integral membrane protein 273 39.48 0 303302..304261 + 319 59713456 - VF_A0273 - elastase 2 precursor 274 35.55 0 304321..305448 - 375 59713457 - VF_A0274 - acyl-CoA desaturase 275 36.29 0 305581..305817 + 78 59713458 - VF_A0275 - hypothetical protein 276 36.49 0 305827..307062 - 411 59713459 - VF_A0276 - GGDEF domain-containing protein 277 35.54 0 307799..308296 - 165 59713460 - VF_A0277 - hypothetical protein 278 35.95 0 308442..309398 - 318 59713461 alx VF_A0278 - putative membrane-bound redox modulator that IS induced by high pH 279 39.32 0 309787..310956 + 389 59713462 - VF_A0279 - hypothetical protein 280 34.36 0 311017..311988 - 323 59713463 - VF_A0280 - hypothetical protein 281 38.85 0 312151..314271 + 706 59713464 nrdD VF_A0281 - anaerobic ribonucleoside triphosphate reductase 282 37.15 0 314271..314741 + 156 59713465 nrdG VF_A0282 - anaerobic ribonucleotide reductase-activating protein 283 40.66 0 314832..316019 + 395 59713466 - VF_A0283 - aromatic amino acid aminotransferase 284 38.47 0 316084..316725 + 213 59713467 - VF_A0284 - ATP-dependent Zn protease 285 36.50 0 316802..318220 - 472 59713468 - VF_A0285 - amino-acid ABC transporter binding protein 286 33.89 0 318311..319744 - 477 59713469 - VF_A0286 - amino-acid ABC transporter binding protein 287 37.96 0 320009..320548 - 179 59713470 - VF_A0287 - hypothetical protein 288 37.01 0 320632..321012 - 126 59713471 - VF_A0288 - protein YgiW precursor 289 39.44 0 321185..322690 + 501 59713472 cobQ VF_A0289 - cobyric acid synthase 290 36.72 0 322702..323439 + 245 59713473 modA VF_A0290 - molybdate ABC transporter, periplasmic molybdate-binding protein 291 40.87 0 323436..324125 + 229 59713474 modB VF_A0291 - molybdate ABC transporter permease protein 292 38.63 0 324129..325223 + 364 59713475 modC VF_A0292 - molybdate transporter ATP-binding protein 293 37.30 0 325234..325914 + 226 59713476 yjjG VF_A0293 - nucleotidase 294 35.59 0 325995..326171 - 58 59713477 - VF_A0294 - hypothetical protein 295 38.34 0 326176..326694 - 172 59713478 yaiL VF_A0295 - nucleoprotein/polynucleotide-associated enzyme 296 41.38 +1 326739..327086 + 115 59713479 - VF_A0296 - hypothetical protein 297 40.68 0 327418..327594 + 58 59713480 - VF_A0297 - TorE protein 298 40.88 0 327652..328830 + 392 59713481 torC VF_A0298 - trimethylamine N-oxide reductase, cytochrome c-type subunit 299 42.85 +1 328854..331712 + 952 59713482 torA VF_A0299 - trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 300 34.89 0 331950..333935 + 661 59713483 - VF_A0300 - methyl-accepting chemotaxis protein 301 38.39 0 334332..336071 + 579 59713484 - VF_A0301 - alpha-galactosidase 302 32.58 -1 336291..338270 + 659 59713485 - VF_A0302 - methyl-accepting chemotaxis protein 303 30.61 -1 338260..338406 + 48 59713486 - VF_A0303 - hypothetical protein 304 28.37 -2 338455..339582 - 375 172087799 - VF_A0304 - hypothetical protein 305 38.91 0 339592..340416 - 274 59713488 sapF VF_A0305 - peptide transport system ATP-binding protein SapF 306 42.01 +1 340400..341413 - 337 59713489 sapD VF_A0306 - peptide transport system ATP-binding protein SapD 307 40.20 0 341413..342300 - 295 59713490 sapC VF_A0307 - peptide transport system permease protein SapC 308 37.45 0 342287..343234 - 315 59713491 sapB VF_A0308 - peptide transport system permease protein SapB 309 38.13 0 343234..344859 - 541 59713492 sapA VF_A0309 - peptide transport protein SapA 310 37.84 0 344937..345956 - 339 59713493 pspF VF_A0310 - DNA-binding transcriptional activator 311 35.89 0 346132..346797 + 221 59713494 pspA VF_A0311 - regulatory protein for phage-shock-protein operon 312 38.67 0 346861..347085 + 74 59713495 pspB VF_A0312 - phage shock protein B 313 40.57 0 347085..347471 + 128 59713496 pspC VF_A0313 - PspC transcriptional regulator, toxin of PspCB toxin-antitoxin pair 314 38.98 0 347567..348964 + 465 59713497 ycjX VF_A0314 - hypothetical protein 315 38.30 0 348961..349986 + 341 59713498 ycjF VF_A0315 - hypothetical protein 316 38.68 0 350247..351125 + 292 59713499 thiD VF_A0316 - phosphomethylpyrimidine kinase 317 40.56 0 351118..351864 + 248 59713500 - VF_A0317 - hydroxymethylpyrimidine transport ATP-binding protein 318 40.42 0 351857..352675 + 272 59713501 tauC VF_A0318 - taurine transporter permease subunit 319 39.14 0 352703..353650 + 315 59713502 - VF_A0319 - hydroxymethylpyrimidine-binding protein 320 39.37 0 353669..354331 + 220 59713503 - VF_A0320 - transcriptional activator TenA 321 41.67 +1 354364..355167 + 267 59713504 thiM VF_A0321 - hydroxyethylthiazole kinase 322 39.75 0 355178..355816 + 212 59713505 - VF_A0322 - thiamine-phosphate pyrophosphorylase 323 31.24 -1 355822..356634 - 270 59713506 - VF_A0323 - GGDEF domain-containing protein 324 36.13 0 356822..358108 - 428 59713507 - VF_A0324 - thiol:disulfide interchange protein DsbD 325 38.61 0 358786..360471 + 561 59713508 - VF_A0325 - methyl-accepting chemotaxis protein 326 36.19 0 360529..361227 - 232 59713509 - VF_A0326 - hypothetical protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0