version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 135 41.18 +1 146805..147632 + 275 59713314 - VF_A0131 - CAAX amino protease 136 37.55 0 147797..148033 + 78 59713315 - VF_A0132 - hypothetical protein 137 38.57 0 148094..148513 - 139 59713316 - VF_A0133 - hypothetical protein 138 43.14 +1 148617..148718 - 33 59713317 - VF_A0134 - hypothetical protein 139 34.08 0 148687..150549 - 620 59713318 - VF_A0135 - DNA helicase II 140 32.80 -1 150820..151947 + 375 59713319 - VF_A0136 - hypothetical protein 141 32.66 -1 151930..152520 - 196 59713320 - VF_A0137 - Type II restriction-modification system methylation subunit 142 32.41 -1 152687..153226 - 179 59713321 - VF_A0138 - hypothetical protein 143 41.64 +1 153410..154444 - 344 59713322 - VF_A0139 - hypothetical protein 144 39.45 0 155000..155947 + 315 59713323 - VF_A0140 - hypothetical protein 145 41.51 +1 157776..160073 - 765 59713325 - VF_A0142 - formate acetyltransferase 146 41.24 +1 160600..162078 + 492 59713326 gbpA VF_A0143 - N-acetylglucosamine-binding protein A 147 39.62 0 162194..163132 - 312 59713327 hvnB VF_A0144 - halovibrin HvnB 148 36.79 0 163454..163945 + 163 59713328 ygjP VF_A0145 - metal dependent hydrolase 149 41.89 +1 163976..164197 - 73 59713329 - VF_A0146 - hypothetical protein 150 40.00 0 164594..164788 + 64 59713330 - VF_A0147 - hypothetical protein 151 36.69 0 164855..165241 - 128 59713331 pilA2 VF_A0148 - PilA-like type-IV pilus protein 152 35.82 0 165617..165817 + 66 59713332 - VF_A0149 - hypothetical protein 153 42.05 +1 165913..166635 + 240 59713333 yeeN VF_A0150 - hypothetical protein 154 40.79 0 166790..168292 + 500 59713334 rhlE VF_A0151 - RNA helicase 155 34.37 0 168529..169980 + 483 59713335 - VF_A0152 - GGDEF domain-containing protein 156 42.81 +1 170231..171433 + 400 59713336 emrD VF_A0153 - multidrug resistance protein D 157 40.39 0 171540..172928 - 462 59713337 dbpA VF_A0154 - ATP-dependent RNA helicase DbpA 158 33.82 0 173231..174679 + 482 59713338 - VF_A0155 - GGDEF domain-containing protein 159 37.02 0 174758..175489 + 243 59713339 - VF_A0156 - hypothetical protein 160 39.72 0 175505..176710 - 401 59713340 - VF_A0157 - permease 161 39.09 0 176797..177612 + 271 59713341 fhuC VF_A0158 - iron-hydroxamate transporter subunit 162 41.16 +1 177651..178544 + 297 59713342 fhuD VF_A0159 - iron-hydroxamate transporter subunit 163 39.97 0 178557..180560 + 667 59713343 fhuB VF_A0160 - iron-hydroxamate transporter permease subunit 164 37.73 0 180709..182484 + 591 59713344 iucA VF_A0161 - aerobactin siderophore biosynthesis protein IucA 165 38.05 0 182477..183388 + 303 59713345 iucB VF_A0162 - aerobactin siderophore synthesis protein IucB 166 38.33 0 183388..185148 + 586 59713346 iucC VF_A0163 - aerobactin siderophore biosynthesis protein IucC 167 38.72 0 185177..186475 + 432 59713347 iucD VF_A0164 - aerobactin siderophore biosynthesis protein IucD 168 37.93 0 186579..188753 + 724 59713348 iutA VF_A0165 - ferric aerobactin receptor precursor IutA 169 40.80 0 188936..189859 + 307 59713349 qmcA VF_A0166 - protease, membrane anchored 170 39.29 0 189869..190321 + 150 59713350 - VF_A0167 - hypothetical protein 171 34.13 0 190558..191808 + 416 59713351 - VF_A0168 - methyl-accepting chemotaxis protein 172 38.79 0 192233..193864 + 543 59713352 - VF_A0169 - methyl-accepting chemotaxis protein 173 39.73 0 194325..195950 + 541 59713353 - VF_A0170 - methyl-accepting chemotaxis protein 174 34.31 0 196139..196240 - 33 59713354 - VF_A0171 - hypothetical protein 175 29.41 -2 196299..196553 + 84 59713355 - VF_A0172 - hypothetical protein 176 42.06 +1 196618..197499 - 293 59713356 - VF_A0173 - 3-hydroxyisobutyrate dehydrogenase 177 31.43 -1 197650..198174 - 174 59713357 - VF_A0174 - hypothetical protein 178 38.55 0 198391..199311 - 306 59713358 - VF_A0175 - hypothetical protein 179 38.14 0 199419..199730 + 103 59713359 - VF_A0176 - ArsR family transcriptional regulator 180 38.82 0 199754..200227 + 157 59713360 ogt VF_A0177 - O-6-alkylguanine-DNA:cysteine-protein methyltransferase 181 34.97 0 200245..201585 - 446 59713361 cusS VF_A0178 - sensory histidine kinase in two-component regulatory system with CusR, senses copper ions 182 36.71 0 201590..202270 - 226 59713362 cusR VF_A0179 - DNA-binding response regulator in two-component regulatory system with CusS 183 33.57 0 202374..202799 - 141 59713363 - VF_A0180 - hypothetical protein 184 39.34 0 202949..203614 + 221 59713364 - VF_A0181 - transcriptional regulator SyrB 185 37.51 0 203620..205008 + 462 59713365 - VF_A0182 - two component sensor histidine kinase 186 34.40 0 205244..206275 + 343 59713366 - VF_A0183 - hypothetical protein 187 35.17 0 206285..206827 + 180 59713367 - VF_A0184 - hypothetical protein 188 36.95 0 206812..208551 + 579 59713368 - VF_A0185 - hypothetical protein 189 34.74 0 208548..209330 + 260 59713369 motA2 VF_A0186 - flagellar motor protein MotA2 190 38.94 0 209331..209972 + 213 59713370 motB2 VF_A0187 - flagellar motor protein MotB2 191 42.50 +1 210078..212531 - 817 59713371 torZ VF_A0188 - TMAO reductase III (TorYZ), TorZ subunit 192 41.48 +1 212544..213635 - 363 59713372 torY VF_A0189 - TMAO reductase III (TorYZ), cytochrome c-type subunit 193 23.96 -2 213769..213864 - 31 59713373 - VF_A0190 - hypothetical protein 194 40.42 0 214002..216104 + 700 59713374 - VF_A0191 - FhuE receptor precursor 195 38.54 0 216215..216982 + 255 59713375 - VF_A0192 - hypothetical protein 196 40.12 0 216984..218339 + 451 59713376 - VF_A0193 - TolQ protein 197 42.16 +1 218339..218848 + 169 59713377 - VF_A0194 - TolQ protein 198 40.49 0 218845..219249 + 134 59713378 - VF_A0195 - TolR protein 199 44.77 +1 219249..219869 + 206 59713379 - VF_A0196 - TonB protein 200 38.16 0 219866..221047 + 393 59713380 - VF_A0197 - TPR domain-containing protein 201 36.04 0 221111..221590 - 159 59713381 - VF_A0198 - transcriptional repressor 202 37.41 0 221590..222522 - 310 59713382 - VF_A0199 - chitooligosaccharide transport ATP-binding protein oppD 203 38.87 0 222519..223385 - 288 59713383 - VF_A0200 - chitooligosaccharide transport ATP-binding protein oppF 204 39.67 0 223683..224819 + 378 59713384 - VF_A0201 - hypothetical protein 205 37.09 0 224872..225270 - 132 59713385 - VF_A0202 - hypothetical protein 206 30.72 -1 225569..225721 + 50 59713386 - VF_A0203 - hypothetical protein 207 37.56 0 225772..226410 - 212 59713387 - VF_A0204 - hypothetical protein 208 38.96 0 226529..227506 - 325 59713388 yeiH VF_A0205 - inner membrane protein 209 38.29 0 227737..228987 + 416 59713389 ydeE VF_A0206 - transporter 210 38.28 0 229014..229964 - 316 59713390 - VF_A0207 - hypothetical protein 211 36.16 0 230046..231212 - 388 59713391 - VF_A0208 - arylsulfatase regulator (Fe-S oxidoreductase) 212 38.33 0 231374..232774 + 466 59713392 - VF_A0209 - phosphatidylserine decarboxylase 213 35.24 0 232903..234531 + 542 59713393 eptA VF_A0210 - metal dependent hydrolase 214 35.23 0 234631..235317 + 228 59713394 - VF_A0211 - transcriptional regulator 215 33.19 -1 235305..236729 + 474 59713395 - VF_A0212 - two component sensor histidine kinase 216 40.48 0 236799..238337 - 512 59713396 - VF_A0213 - sulfatase family protein 217 34.62 0 238234..238623 - 129 172087795 - VF_A1178 - hypothetical protein 218 35.64 0 238736..239644 - 302 59713397 - VF_A0214 - transcriptional regulator SyrB 219 25.25 -2 240121..241011 + 296 59713398 - VF_A0215 - hypothetical protein 220 29.59 -2 241001..242149 + 382 59713399 - VF_A0216 - two component response regulator 221 32.09 -1 242118..242438 + 106 59713400 - VF_A0217 - hypothetical protein 222 35.16 0 242789..243007 + 72 59713401 flp2 VF_A0218 - fimbrial protein precursor Flp1 223 29.89 -1 243017..243451 + 144 172087796 - VF_A1179 - hypothetical protein 224 33.72 0 243460..244245 + 261 59713402 - VF_A0219 - tungstate-binding protein precursor 225 35.00 0 244256..245578 + 440 59713403 - VF_A0220 - general secretion pathway protein D 226 35.01 0 245575..246111 + 178 59713404 - VF_A0221 - putative lipoprotein 227 33.83 0 246113..247330 + 405 59713405 - VF_A0222 - ATPase involved in chromosome partitioning 228 39.08 0 247333..248619 + 428 59713406 tadA2 VF_A0223 - putative type IV secretion NTPase 229 33.98 0 248616..249539 + 307 59713407 tadB2 VF_A0224 - TadB-like protein involved in pilus formation and/or protein secretion 230 33.00 -1 249509..250420 + 303 59713408 tadC2 VF_A0225 - bipartite nuclear localization signal containing protein 231 30.78 -1 250410..251153 + 247 59713409 tadD2 VF_A0226 - TPR repeat-containing protein 232 35.17 0 251158..251646 + 162 59713410 tadE2 VF_A0227 - TadE-like protein 233 35.93 0 251630..252169 + 179 59713411 tadF2 VF_A0228 - ATP/GTP-binding motif-containing protein 234 38.76 0 252171..253442 + 423 59713412 tadG2 VF_A0229 - TadG-like protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0