version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 74 34.08 0 74370..74903 + 177 59713254 hnoX VF_A0071 - heme nitric oxide and/or oxygen binding protein HNOX 75 35.71 0 74922..76649 + 575 59713255 - VF_A0072 - hybrid two component sensor histidine kinase 76 39.43 0 76715..78190 - 491 59713256 - VF_A0073 - di-/tripeptide transporter 77 42.24 +1 78455..79375 - 306 59713257 - VF_A0074 - hypothetical protein 78 38.79 0 79398..83792 - 1464 59713258 mshQ2 VF_A0075 - MshQ protein 79 40.69 0 83785..84219 - 144 59713259 mshP2 VF_A0076 - MshP protein 80 42.64 +1 84191..84985 - 264 59713260 mshO2 VF_A0077 - MshO protein 81 38.74 0 84985..85539 - 184 59713261 mshD2 VF_A0078 - MshD protein 82 36.19 0 85529..86053 - 174 59713262 mshC2 VF_A0079 - MSHA pilin protein MshC 83 38.30 0 86425..87270 - 281 59713263 dmsC VF_A0080 - dimethyl sulfoxide reductase, anaerobic, subunit C 84 39.35 0 87272..87886 - 204 59713264 ynfG VF_A0081 - oxidoreductase, Fe-S subunit 85 41.86 +1 87897..90335 - 812 59713265 dmsA VF_A0082 - dimethyl sulfoxide reductase, anaerobic, subunit A 86 32.48 -1 90671..91255 + 194 59713266 dmsD VF_A0083 - twin-argninine leader-binding protein for DmsA and TorA 87 39.43 0 91255..91812 + 185 59713267 - VF_A0084 - ferredoxin-type protein NapF 88 40.73 0 91891..92985 - 364 59713268 - VF_A0085 - transporter 89 41.71 +1 93153..94907 - 584 59713269 ggt VF_A0086 - gamma-glutamyltranspeptidase 90 38.76 0 95069..96136 - 355 59713270 - VF_A0087 - outer membrane protein RomA 91 37.56 0 96371..96985 + 204 59713271 - VF_A0088 - transcriptional regulator 92 37.86 0 97108..98079 + 323 59713272 - VF_A0089 - hydrolase/lipase 93 29.89 -1 98085..99218 - 377 59713273 - VF_A0090 - astacin-like metalloendopeptidase 94 40.15 0 100117..101964 - 615 59713274 - VF_A0091 - M3 family peptidase 95 37.57 0 102112..103668 - 518 59713275 - VF_A0092 - methyl-accepting chemotaxis protein, putative aerotaxis receptor 96 41.36 +1 104153..105523 + 456 59713276 ygfQ VF_A0093 - transporter 97 39.90 0 105602..106210 - 202 59713277 ynjF VF_A0094 - phosphatidyl transferase, inner membrane protein 98 40.59 0 106203..106850 - 215 59713278 ynjD VF_A0095 - ABC transporter ATP-binding protein 99 42.18 +1 106864..108525 - 553 59713279 - VF_A0096 - ABC transporter permease protein 100 41.19 +1 108543..109688 - 381 59713280 ynjB VF_A0097 - hypothetical protein 101 39.09 0 109929..110606 - 225 59713281 ydjX VF_A0098 - inner membrane protein 102 43.02 +1 110622..111395 - 257 59713282 - VF_A0099 - glutamate synthase 103 43.46 +1 111392..113188 - 598 59713283 yeiT VF_A0100 - oxidoreductase 104 42.99 +1 113218..114201 - 327 59713284 - VF_A0101 - thiosulfate sulfurtransferase 105 38.34 0 114614..116311 + 565 59713285 - VF_A0102 - two component sensor histidine kinase 106 40.13 0 116320..116937 + 205 59713286 - VF_A0103 - two component response regulator 107 38.52 0 117031..117705 + 224 59713287 yraR VF_A0104 - nucleoside-diphosphate-sugar epimerase 108 38.78 0 117784..118719 + 311 59713288 - VF_A0105 - transcriptional regulator 109 39.48 0 118786..121194 - 802 59713289 - VF_A0106 - beta-mannosidase 110 38.66 0 121704..123524 + 606 59713290 - VF_A0107 - methyl-accepting chemotaxis protein 111 33.33 -1 123777..124061 + 94 59713291 - VF_A0108 - hypothetical protein 112 36.21 0 124143..124628 - 161 59713292 - VF_A0109 - hypothetical protein 113 42.06 +1 124820..125770 + 316 59713293 ybhG VF_A0110 - membrane fusion protein (MFP) component of efflux pump, membrane anchor 114 40.78 0 125775..126701 + 308 59713294 ybhF VF_A0111 - ABC transporter ATP-binding protein 115 38.87 0 126698..127798 + 366 59713295 ybhS VF_A0112 - ABC transporter membrane protein 116 34.15 0 128249..128371 + 40 172087794 - VF_A1177 - hypothetical protein 117 38.33 0 128447..129106 - 219 59713296 - VF_A0113 - NAD(P)H-dependent flavin reductase 118 38.46 0 129325..130494 + 389 59713297 - VF_A0114 - methyltransferase 119 34.64 0 130570..131106 + 178 59713298 - VF_A0115 - acetyltransferase 120 41.40 +1 131303..132232 + 309 59713299 yceM VF_A0116 - oxidoreductase 121 38.33 0 132236..133135 - 299 59713300 - VF_A0117 - drug/metabolite exporter family protein 122 43.03 +1 133199..134302 - 367 59713301 - VF_A0118 - morphinone reductase 123 40.32 0 134323..134694 - 123 59713302 - VF_A0119 - lactoylglutathione lyase 124 39.81 0 135014..137158 + 714 59713303 - VF_A0120 - putative cytoplasmic protein 125 37.34 0 137170..137643 + 157 59713304 - VF_A0121 - hypothetical protein 126 39.65 0 137700..138776 - 358 59713305 - VF_A0122 - hypothetical protein 127 39.74 0 139144..140610 + 488 59713306 ybgH VF_A0123 - transporter 128 40.88 0 140955..142439 + 494 59713307 tppB VF_A0124 - putative tripeptide transporter permease 129 43.02 +1 142625..142975 + 116 59713308 - VF_A0125 - rhodanese-related sulfurtransferase 130 41.67 +1 142985..143692 - 235 59713309 - VF_A0126 - DNA-3-methyladenine glycosylase 131 37.24 0 143883..144368 + 161 59713310 - VF_A0127 - hypothetical protein 132 36.67 0 144659..144928 + 89 59713311 - VF_A0128 - PTS system, IIB component 133 40.18 0 144944..146200 + 418 59713312 ulaA VF_A0129 - ascorbate-specific PTS system enzyme IIC 134 35.93 0 146185..146646 + 153 59713313 - VF_A0130 - PTS system, 3-keto-L-gulonate specific IIA component 135 41.18 +1 146805..147632 + 275 59713314 - VF_A0131 - CAAX amino protease 136 37.55 0 147797..148033 + 78 59713315 - VF_A0132 - hypothetical protein 137 38.57 0 148094..148513 - 139 59713316 - VF_A0133 - hypothetical protein 138 43.14 +1 148617..148718 - 33 59713317 - VF_A0134 - hypothetical protein 139 34.08 0 148687..150549 - 620 59713318 - VF_A0135 - DNA helicase II 140 32.80 -1 150820..151947 + 375 59713319 - VF_A0136 - hypothetical protein 141 32.66 -1 151930..152520 - 196 59713320 - VF_A0137 - Type II restriction-modification system methylation subunit 142 32.41 -1 152687..153226 - 179 59713321 - VF_A0138 - hypothetical protein 143 41.64 +1 153410..154444 - 344 59713322 - VF_A0139 - hypothetical protein 144 39.45 0 155000..155947 + 315 59713323 - VF_A0140 - hypothetical protein 145 41.51 +1 157776..160073 - 765 59713325 - VF_A0142 - formate acetyltransferase 146 41.24 +1 160600..162078 + 492 59713326 gbpA VF_A0143 - N-acetylglucosamine-binding protein A 147 39.62 0 162194..163132 - 312 59713327 hvnB VF_A0144 - halovibrin HvnB 148 36.79 0 163454..163945 + 163 59713328 ygjP VF_A0145 - metal dependent hydrolase 149 41.89 +1 163976..164197 - 73 59713329 - VF_A0146 - hypothetical protein 150 40.00 0 164594..164788 + 64 59713330 - VF_A0147 - hypothetical protein 151 36.69 0 164855..165241 - 128 59713331 pilA2 VF_A0148 - PilA-like type-IV pilus protein 152 35.82 0 165617..165817 + 66 59713332 - VF_A0149 - hypothetical protein 153 42.05 +1 165913..166635 + 240 59713333 yeeN VF_A0150 - hypothetical protein 154 40.79 0 166790..168292 + 500 59713334 rhlE VF_A0151 - RNA helicase 155 34.37 0 168529..169980 + 483 59713335 - VF_A0152 - GGDEF domain-containing protein 156 42.81 +1 170231..171433 + 400 59713336 emrD VF_A0153 - multidrug resistance protein D 157 40.39 0 171540..172928 - 462 59713337 dbpA VF_A0154 - ATP-dependent RNA helicase DbpA 158 33.82 0 173231..174679 + 482 59713338 - VF_A0155 - GGDEF domain-containing protein 159 37.02 0 174758..175489 + 243 59713339 - VF_A0156 - hypothetical protein 160 39.72 0 175505..176710 - 401 59713340 - VF_A0157 - permease 161 39.09 0 176797..177612 + 271 59713341 fhuC VF_A0158 - iron-hydroxamate transporter subunit 162 41.16 +1 177651..178544 + 297 59713342 fhuD VF_A0159 - iron-hydroxamate transporter subunit 163 39.97 0 178557..180560 + 667 59713343 fhuB VF_A0160 - iron-hydroxamate transporter permease subunit 164 37.73 0 180709..182484 + 591 59713344 iucA VF_A0161 - aerobactin siderophore biosynthesis protein IucA 165 38.05 0 182477..183388 + 303 59713345 iucB VF_A0162 - aerobactin siderophore synthesis protein IucB 166 38.33 0 183388..185148 + 586 59713346 iucC VF_A0163 - aerobactin siderophore biosynthesis protein IucC 167 38.72 0 185177..186475 + 432 59713347 iucD VF_A0164 - aerobactin siderophore biosynthesis protein IucD 168 37.93 0 186579..188753 + 724 59713348 iutA VF_A0165 - ferric aerobactin receptor precursor IutA 169 40.80 0 188936..189859 + 307 59713349 qmcA VF_A0166 - protease, membrane anchored 170 39.29 0 189869..190321 + 150 59713350 - VF_A0167 - hypothetical protein 171 34.13 0 190558..191808 + 416 59713351 - VF_A0168 - methyl-accepting chemotaxis protein 172 38.79 0 192233..193864 + 543 59713352 - VF_A0169 - methyl-accepting chemotaxis protein 173 39.73 0 194325..195950 + 541 59713353 - VF_A0170 - methyl-accepting chemotaxis protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0