version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1067 39.24 0 1199301..1199774 + 157 59714246 - VF_A1063 - MarR family transcriptional regulator 1068 36.50 0 1199875..1200885 + 336 59714247 - VF_A1064 - transporter 1069 37.05 0 1201057..1202025 - 322 59714248 - VF_A1065 - hypothetical protein 1070 37.44 0 1202264..1203163 - 299 59714249 - VF_A1066 - LysR family transcriptional regulator 1071 39.41 0 1203292..1203966 + 224 59714250 - VF_A1067 - hypothetical protein 1072 38.21 0 1204028..1204765 - 245 59714251 pepE VF_A1068 - peptidase E 1073 29.26 -2 1205151..1206746 - 531 59714252 - VF_A1069 - methyl-accepting chemotaxis protein 1074 27.98 -2 1206786..1207028 - 80 59714253 - VF_A1070 - hypothetical protein 1075 29.41 -2 1207108..1208637 - 509 59714254 - VF_A1071 - methyl-accepting chemotaxis protein, putative aerotaxis receptor 1076 36.00 0 1208933..1210507 + 524 59714255 - VF_A1072 - methyl-accepting chemotaxis protein 1077 24.59 -2 1210837..1212438 + 533 59714256 - VF_A1073 - methyl-accepting chemotaxis protein 1078 29.50 -2 1212467..1213222 + 251 59714257 acfC VF_A1074 - accessory colonization factor AcfC 1079 33.98 0 1213688..1214767 - 359 59714258 - VF_A1075 - heptosyltransferase 1080 26.19 -2 1214785..1215498 - 237 59714259 - VF_A1076 - EAL domain-containing protein 1081 41.14 +1 1216449..1217306 + 285 59714260 - VF_A1077 - RIO1 protein 1082 37.21 0 1217338..1217982 - 214 59714261 - VF_A1078 - acetyltransferase/hydrolase family protein 1083 39.03 0 1218104..1219192 - 362 59714262 ydiK VF_A1079 - inner membrane protein 1084 37.84 0 1219279..1220166 - 295 59714263 - VF_A1080 - hypothetical protein 1085 19.05 -2 1220604..1221212 - 202 59714264 - VF_A1081 - hypothetical protein 1086 21.48 -2 1221421..1222230 + 269 59714265 - VF_A1082 - AraC family transcriptional regulator 1087 23.01 -2 1222827..1223417 + 196 59714266 - VF_A1083 - hypothetical protein 1088 27.36 -2 1223893..1225767 + 624 59714267 - VF_A1084 - methyl-accepting chemotaxis protein 1089 40.94 0 1225797..1225967 - 56 59714268 - VF_A1085 - hypothetical protein 1090 36.81 0 1226101..1226991 + 296 59714269 - VF_A1086 - LysR family transcriptional regulator 1091 39.08 0 1227036..1227122 - 28 172087823 - VF_A1195 - hypothetical protein 1092 40.17 0 1227451..1228503 + 350 59714270 - VF_A1087 - ABC transporter substrate-binding protein 1093 39.83 0 1228513..1229328 + 271 59714271 - VF_A1088 - hypothetical protein 1094 38.63 0 1229325..1230212 + 295 59714272 - VF_A1089 - ABC transporter permease protein 1095 37.79 0 1230199..1230984 + 261 59714273 - VF_A1090 - ABC transporter permease protein 1096 37.65 0 1230984..1232003 + 339 59714274 afuC VF_A1091 - CP4-6 prophage; ferric transporter subunit 1097 35.14 0 1232006..1232671 + 221 59714275 - VF_A1092 - hypothetical protein 1098 28.24 -2 1232706..1232960 - 84 59714276 - VF_A1093 - hypothetical protein 1099 41.43 +1 1233192..1233401 - 69 59714277 cspG VF_A1094 - DNA-binding transcriptional regulator 1100 34.99 0 1233751..1234653 - 300 59714278 hvnA VF_A1095 - halovibrin HvnA 1101 39.79 0 1234669..1236789 - 706 59714279 - VF_A1096 - hypothetical protein 1102 37.84 0 1236884..1238701 - 605 59714280 - VF_A1097 - hypothetical protein 1103 36.16 0 1238792..1239994 - 400 59714281 - VF_A1098 - hypothetical protein 1104 39.03 0 1240134..1242011 - 625 59714282 - VF_A1099 - putative lipoprotein 1105 40.51 0 1242013..1242987 - 324 59714283 ompA VF_A1100 - outer membrane protein A 1106 28.37 -2 1243121..1243402 - 93 59714284 - VF_A1101 - hypothetical protein 1107 35.20 0 1243849..1244652 - 267 59714285 - VF_A1102 - phage integrase family site specific recombinase 1108 40.06 0 1244918..1245928 + 336 59714286 - VF_A1103 - multidrug resistance protein A 1109 37.69 0 1245925..1247394 + 489 59714287 - VF_A1104 - multidrug resistance protein B 1110 38.34 0 1247564..1248442 + 292 59714288 hvnC VF_A1105 - halovibrin HvnC 1111 34.26 0 1248597..1248812 + 71 59714289 - VF_A1106 - hypothetical protein 1112 36.70 0 1248864..1250468 - 534 59714290 - VF_A1107 - mechanosensitive ion channel 1113 39.08 0 1250705..1251226 - 173 59714291 - VF_A1108 - hypothetical protein 1114 29.41 -2 1251339..1251440 - 33 59714293 - VF_A1110 - hypothetical protein 1115 39.31 0 1251403..1252305 + 300 59714292 - VF_A1109 - LysR family transcriptional regulator 1116 38.69 0 1252312..1253151 - 279 59714294 - VF_A1111 - hypothetical protein 1117 38.95 0 1253243..1253830 - 195 59714295 - VF_A1112 - amino acid transporter LysE 1118 38.51 0 1253939..1254382 + 147 59714296 - VF_A1113 - AsnC family transcriptional regulator 1119 36.70 0 1254379..1255062 - 227 59714297 - VF_A1114 - cobalt-zinc-cadmium resistance protein CzcD 1120 40.79 0 1255201..1256085 + 294 59714298 - VF_A1115 - LysR family transcriptional regulator 1121 41.28 +1 1256168..1256809 + 213 59714299 - VF_A1116 - homoserine/homoserine lactone efflux protein 1122 41.03 0 1256903..1257877 - 324 59714300 - VF_A1117 - hypothetical protein 1123 40.84 0 1257892..1258584 - 230 59714301 - VF_A1118 - hypothetical protein 1124 37.27 0 1258955..1259386 - 143 59714302 - VF_A1119 - hypothetical protein 1125 36.78 0 1259521..1260159 + 212 59714303 - VF_A1120 - hydrogenase cytochrome B-type subunit 1126 38.03 0 1260165..1260590 + 141 59714304 - VF_A1121 - MarR family transcriptional regulator 1127 40.50 0 1260854..1261411 + 185 59714305 ectA VF_A1122 - L-2,4-diaminobutyric acid acetyltransferase 1128 41.47 +1 1261432..1262697 + 421 59714306 ectB VF_A1123 - diaminobutyrate--2-oxoglutarate aminotransferase 1129 40.57 0 1262712..1263098 + 128 59714307 ectC VF_A1124 - L-ectoine synthase 1130 39.71 0 1263187..1264614 + 475 59714308 - VF_A1125 - aspartate kinase 1131 25.25 -2 1265068..1265958 + 296 59714309 - VF_A1126 - AraC family transcription regulator 1132 34.09 0 1265997..1266260 + 87 59714310 - VF_A1127 - hypothetical protein 1133 34.07 0 1266273..1266545 + 90 59714311 - VF_A1128 - hypothetical protein 1134 35.86 0 1266631..1266828 + 65 172087824 - VF_A1196 - hypothetical protein 1135 39.38 0 1267088..1278502 - 3804 59714312 - VF_A1129 - hypothetical protein 1136 36.63 0 1278903..1279721 - 272 59714313 - VF_A1130 - hypothetical protein 1137 25.51 -2 1279749..1280489 - 246 59714314 - VF_A1131 - hypothetical protein 1138 40.50 0 1280721..1280999 - 92 59714315 - VF_A1132 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 1139 44.34 +1 1281031..1281339 - 102 59714316 - VF_A1133 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 1140 44.98 +2 1281379..1281687 - 102 59714317 - VF_A1134 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 1141 44.09 +1 1281726..1282004 - 92 59714318 - VF_A1135 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 1142 43.51 +1 1282037..1282321 - 94 59714319 - VF_A1136 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 1143 41.94 +1 1282357..1282635 - 92 59714320 - VF_A1137 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 1144 24.31 -2 1282721..1283296 - 191 59714321 - VF_A1138 - structural protein P5 1145 31.17 -1 1283457..1284104 - 215 59714322 - VF_A1139 - hypothetical protein 1146 37.99 0 1284336..1284614 + 92 59714323 - VF_A1140 - hypothetical protein 1147 32.97 -1 1284646..1284921 + 91 59714324 - VF_A1141 - hypothetical protein 1148 41.55 +1 1285199..1286086 - 295 59714325 - VF_A1142 - LysR family transcriptional regulator 1149 37.37 0 1286223..1286693 + 156 59714326 - VF_A1143 - hypothetical protein 1150 43.07 +1 1286763..1287101 - 112 59714327 - VF_A1144 - putative cytoplasmic protein 1151 38.33 0 1287309..1287788 - 159 59714328 - VF_A1145 - hypothetical protein 1152 39.63 0 1288237..1289220 + 327 59714329 ybcF VF_A1146 - carbamate kinase 1153 37.84 0 1289296..1290093 - 265 59714330 ybiV VF_A1147 - hydrolase 1154 40.39 0 1290190..1291152 - 320 59714331 ycjZ VF_A1148 - LysR family transcriptional regulator 1155 43.61 +1 1291345..1294497 - 1050 59714332 acrF VF_A1149 - multidrug efflux system protein 1156 42.63 +1 1294499..1295617 - 372 172087825 acrA VF_A1152 - multidrug efflux system 1157 37.81 0 1295795..1296754 - 319 59714336 ybiN VF_A1153 - putative SAM-dependent methyltransferase 1158 38.10 0 1296867..1297223 - 118 59714337 yibL VF_A1154 - hypothetical protein 1159 41.55 +1 1297310..1297723 + 137 59714338 yaeJ VF_A1155 - hypothetical protein 1160 37.56 0 1297723..1299639 + 638 172087826 - VF_A1156 - ATP-dependent DNA helicase RecQ 1161 38.82 0 1299749..1301389 + 546 59714341 - VF_A1158 - putative cytoplasmic protein 1162 38.27 0 1301467..1302660 - 397 59714342 ydhC VF_A1159 - inner membrane transport protein YdhC 1163 40.92 0 1302791..1303699 + 302 59714343 ydhB VF_A1160 - putative DNA-binding transcriptional regulator 1164 40.41 0 1303770..1304405 - 211 59714344 pdxH VF_A1161 - pyridoxamine 5'-phosphate oxidase 1165 41.53 +1 1304524..1316325 - 3933 59714345 rtxA2 VF_A1162 - RTX repeat-containing calcium-binding cytotoxin RtxA2 1166 37.43 0 1316865..1318181 + 438 59714346 - VF_A1163 - outer membrane protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.