version 1.0
Vibrio fischeri ES114 chromosome II, complete sequence - 1..1330333 1175 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1036 41.93 +1 1165569..1166324 + 251 59714215 sypM VF_A1032 - acetyltransferase 1037 37.91 0 1166314..1167450 + 378 59714216 sypN VF_A1033 - glycosyltransferase 1038 39.80 0 1167447..1168946 + 499 59714217 sypO VF_A1034 - chain length regulator (capsular polysaccharide biosynthesis) 1039 34.71 0 1169102..1170190 + 362 59714218 sypP VF_A1035 - glycosyltransferase 1040 34.93 0 1170187..1171374 + 395 59714219 sypQ VF_A1036 - glycosyltransferase 1041 36.28 0 1171389..1172033 + 214 59714220 sypR VF_A1037 - sugar transferase 1042 35.45 0 1172254..1174146 + 630 59714221 - VF_A1038 - EAL/GGDEF domain-containing protein 1043 38.65 0 1174219..1174782 + 187 59714222 - VF_A1039 - hypothetical protein 1044 38.60 0 1174823..1175050 + 75 59714223 - VF_A1040 - glutaredoxin 1045 31.45 -1 1175153..1175524 - 123 59714224 - VF_A1041 - protein YgiW precursor 1046 41.71 +1 1175872..1178331 - 819 59714225 ybbP VF_A1042 - inner membrane protein 1047 40.27 0 1178333..1179010 - 225 59714226 ybbA VF_A1043 - ABC transporter ATP-binding protein 1048 37.89 0 1179169..1179783 + 204 59714227 tesA VF_A1044 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 1049 38.10 0 1179843..1180241 - 132 59714228 - VF_A1045 - hypothetical protein 1050 40.23 0 1180303..1181172 + 289 59714229 hdfR VF_A1046 - DNA-binding transcriptional regulator 1051 40.89 0 1181533..1182696 + 387 59714230 - VF_A1047 - magnesium transporter MgtE 1052 38.17 0 1182759..1183688 - 309 59714231 - VF_A1048 - LysR family transcriptional regulator 1053 40.64 0 1183833..1184954 + 373 59714232 nemA VF_A1049 - N-ethylmaleimide reductase, FMN-linked 1054 35.61 0 1184951..1185742 + 263 59714233 - VF_A1050 - glycine betaine-binding protein 1055 38.89 0 1185818..1186663 - 281 59714234 - VF_A1051 - universal stress protein 1056 39.72 0 1186674..1188161 - 495 59714235 - VF_A1052 - sulfate transporter 1057 37.36 0 1188622..1189143 + 173 59714236 - VF_A1053 - MerR family transcriptional regulator 1058 35.65 0 1189221..1189652 - 143 59714237 yjaB VF_A1054 - acetyltransferase 1059 38.13 0 1189706..1190581 - 291 59714238 - VF_A1055 - drug/metabolite exporter family protein 1060 41.79 +1 1190825..1191214 + 129 59714239 - VF_A1056 - putative lipoprotein 1061 40.53 0 1191299..1193161 - 620 59714240 - VF_A1057 - phosphatase 1062 32.32 -1 1193404..1193799 + 131 59714241 qsrP VF_A1058 - LuxR-regulated periplasmic protein QsrP 1063 37.51 0 1193854..1195338 - 494 59714242 - VF_A1059 - hypothetical protein 1064 38.16 0 1195357..1196661 - 434 59714243 - VF_A1060 - hypothetical protein 1065 34.21 0 1196803..1197717 + 304 59714244 - VF_A1061 - LysR family transcriptional regulator 1066 37.65 0 1197761..1199035 - 424 59714245 - VF_A1062 - transporter 1067 39.24 0 1199301..1199774 + 157 59714246 - VF_A1063 - MarR family transcriptional regulator 1068 36.50 0 1199875..1200885 + 336 59714247 - VF_A1064 - transporter 1069 37.05 0 1201057..1202025 - 322 59714248 - VF_A1065 - hypothetical protein 1070 37.44 0 1202264..1203163 - 299 59714249 - VF_A1066 - LysR family transcriptional regulator 1071 39.41 0 1203292..1203966 + 224 59714250 - VF_A1067 - hypothetical protein 1072 38.21 0 1204028..1204765 - 245 59714251 pepE VF_A1068 - peptidase E 1073 29.26 -2 1205151..1206746 - 531 59714252 - VF_A1069 - methyl-accepting chemotaxis protein 1074 27.98 -2 1206786..1207028 - 80 59714253 - VF_A1070 - hypothetical protein 1075 29.41 -2 1207108..1208637 - 509 59714254 - VF_A1071 - methyl-accepting chemotaxis protein, putative aerotaxis receptor 1076 36.00 0 1208933..1210507 + 524 59714255 - VF_A1072 - methyl-accepting chemotaxis protein 1077 24.59 -2 1210837..1212438 + 533 59714256 - VF_A1073 - methyl-accepting chemotaxis protein 1078 29.50 -2 1212467..1213222 + 251 59714257 acfC VF_A1074 - accessory colonization factor AcfC 1079 33.98 0 1213688..1214767 - 359 59714258 - VF_A1075 - heptosyltransferase 1080 26.19 -2 1214785..1215498 - 237 59714259 - VF_A1076 - EAL domain-containing protein 1081 41.14 +1 1216449..1217306 + 285 59714260 - VF_A1077 - RIO1 protein 1082 37.21 0 1217338..1217982 - 214 59714261 - VF_A1078 - acetyltransferase/hydrolase family protein 1083 39.03 0 1218104..1219192 - 362 59714262 ydiK VF_A1079 - inner membrane protein 1084 37.84 0 1219279..1220166 - 295 59714263 - VF_A1080 - hypothetical protein 1085 19.05 -2 1220604..1221212 - 202 59714264 - VF_A1081 - hypothetical protein 1086 21.48 -2 1221421..1222230 + 269 59714265 - VF_A1082 - AraC family transcriptional regulator 1087 23.01 -2 1222827..1223417 + 196 59714266 - VF_A1083 - hypothetical protein 1088 27.36 -2 1223893..1225767 + 624 59714267 - VF_A1084 - methyl-accepting chemotaxis protein 1089 40.94 0 1225797..1225967 - 56 59714268 - VF_A1085 - hypothetical protein 1090 36.81 0 1226101..1226991 + 296 59714269 - VF_A1086 - LysR family transcriptional regulator 1091 39.08 0 1227036..1227122 - 28 172087823 - VF_A1195 - hypothetical protein 1092 40.17 0 1227451..1228503 + 350 59714270 - VF_A1087 - ABC transporter substrate-binding protein 1093 39.83 0 1228513..1229328 + 271 59714271 - VF_A1088 - hypothetical protein 1094 38.63 0 1229325..1230212 + 295 59714272 - VF_A1089 - ABC transporter permease protein 1095 37.79 0 1230199..1230984 + 261 59714273 - VF_A1090 - ABC transporter permease protein 1096 37.65 0 1230984..1232003 + 339 59714274 afuC VF_A1091 - CP4-6 prophage; ferric transporter subunit 1097 35.14 0 1232006..1232671 + 221 59714275 - VF_A1092 - hypothetical protein 1098 28.24 -2 1232706..1232960 - 84 59714276 - VF_A1093 - hypothetical protein 1099 41.43 +1 1233192..1233401 - 69 59714277 cspG VF_A1094 - DNA-binding transcriptional regulator 1100 34.99 0 1233751..1234653 - 300 59714278 hvnA VF_A1095 - halovibrin HvnA 1101 39.79 0 1234669..1236789 - 706 59714279 - VF_A1096 - hypothetical protein 1102 37.84 0 1236884..1238701 - 605 59714280 - VF_A1097 - hypothetical protein 1103 36.16 0 1238792..1239994 - 400 59714281 - VF_A1098 - hypothetical protein 1104 39.03 0 1240134..1242011 - 625 59714282 - VF_A1099 - putative lipoprotein 1105 40.51 0 1242013..1242987 - 324 59714283 ompA VF_A1100 - outer membrane protein A 1106 28.37 -2 1243121..1243402 - 93 59714284 - VF_A1101 - hypothetical protein 1107 35.20 0 1243849..1244652 - 267 59714285 - VF_A1102 - phage integrase family site specific recombinase 1108 40.06 0 1244918..1245928 + 336 59714286 - VF_A1103 - multidrug resistance protein A 1109 37.69 0 1245925..1247394 + 489 59714287 - VF_A1104 - multidrug resistance protein B 1110 38.34 0 1247564..1248442 + 292 59714288 hvnC VF_A1105 - halovibrin HvnC 1111 34.26 0 1248597..1248812 + 71 59714289 - VF_A1106 - hypothetical protein 1112 36.70 0 1248864..1250468 - 534 59714290 - VF_A1107 - mechanosensitive ion channel 1113 39.08 0 1250705..1251226 - 173 59714291 - VF_A1108 - hypothetical protein 1114 29.41 -2 1251339..1251440 - 33 59714293 - VF_A1110 - hypothetical protein 1115 39.31 0 1251403..1252305 + 300 59714292 - VF_A1109 - LysR family transcriptional regulator 1116 38.69 0 1252312..1253151 - 279 59714294 - VF_A1111 - hypothetical protein 1117 38.95 0 1253243..1253830 - 195 59714295 - VF_A1112 - amino acid transporter LysE 1118 38.51 0 1253939..1254382 + 147 59714296 - VF_A1113 - AsnC family transcriptional regulator 1119 36.70 0 1254379..1255062 - 227 59714297 - VF_A1114 - cobalt-zinc-cadmium resistance protein CzcD 1120 40.79 0 1255201..1256085 + 294 59714298 - VF_A1115 - LysR family transcriptional regulator 1121 41.28 +1 1256168..1256809 + 213 59714299 - VF_A1116 - homoserine/homoserine lactone efflux protein 1122 41.03 0 1256903..1257877 - 324 59714300 - VF_A1117 - hypothetical protein 1123 40.84 0 1257892..1258584 - 230 59714301 - VF_A1118 - hypothetical protein 1124 37.27 0 1258955..1259386 - 143 59714302 - VF_A1119 - hypothetical protein 1125 36.78 0 1259521..1260159 + 212 59714303 - VF_A1120 - hydrogenase cytochrome B-type subunit 1126 38.03 0 1260165..1260590 + 141 59714304 - VF_A1121 - MarR family transcriptional regulator 1127 40.50 0 1260854..1261411 + 185 59714305 ectA VF_A1122 - L-2,4-diaminobutyric acid acetyltransferase 1128 41.47 +1 1261432..1262697 + 421 59714306 ectB VF_A1123 - diaminobutyrate--2-oxoglutarate aminotransferase 1129 40.57 0 1262712..1263098 + 128 59714307 ectC VF_A1124 - L-ectoine synthase 1130 39.71 0 1263187..1264614 + 475 59714308 - VF_A1125 - aspartate kinase 1131 25.25 -2 1265068..1265958 + 296 59714309 - VF_A1126 - AraC family transcription regulator 1132 34.09 0 1265997..1266260 + 87 59714310 - VF_A1127 - hypothetical protein 1133 34.07 0 1266273..1266545 + 90 59714311 - VF_A1128 - hypothetical protein 1134 35.86 0 1266631..1266828 + 65 172087824 - VF_A1196 - hypothetical protein 1135 39.38 0 1267088..1278502 - 3804 59714312 - VF_A1129 - hypothetical protein 37.27 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0