version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 903 47.34 0 955479..956942 + 487 147674466 - VC0395_A0932 - putative transporter 904 49.78 0 956952..958301 + 449 147675282 - VC0395_A0933 - sensor histidine kinase 905 49.06 0 958270..958746 + 158 147673496 - VC0395_A0934 - putative chemotaxis protein CheY 906 48.86 0 958774..959694 - 306 147674095 - VC0395_A0935 - hypothetical protein 907 46.90 0 959792..960565 - 257 147673427 ompV VC0395_A0936 - outer membrane protein OmpV 908 46.71 0 960778..962100 - 440 147674098 - VC0395_A0937 - sensor histidine kinase 909 47.09 0 962126..962830 - 234 147673787 - VC0395_A0938 - DNA-binding response regulator 910 48.54 0 963206..966277 + 1023 147675631 - VC0395_A0939 - hypothetical protein 911 45.83 0 966358..966573 - 71 147675333 - VC0395_A0940 - hypothetical protein 912 47.00 0 966552..967034 - 160 147673175 - VC0395_A0941 - hypothetical protein 913 50.15 0 967533..968507 + 324 147673180 mglB VC0395_A0942 - D-galactose/D-glucose ABC transporter, periplasmic D-galactose/D-glucose-binding protein 914 39.10 -2 968575..968730 - 51 147674284 - VC0395_A0943 - hypothetical protein 915 46.59 0 968713..970221 + 502 147674566 mglA VC0395_A0944 - galactose/methyl galaxtoside transporter ATP-binding protein 916 47.63 0 970226..971239 + 337 147675406 mglC VC0395_A0945 - beta-methylgalactoside transporter inner membrane component 917 38.03 -2 971649..972287 + 212 147674716 - VC0395_A0946 - hypothetical protein 918 37.56 -2 972608..973435 + 275 147675326 - VC0395_A0947 - putative lipoprotein 919 51.63 0 973586..975115 - 509 147673243 - VC0395_A0948 - hypothetical protein 920 48.19 0 975125..975622 - 165 147674013 - VC0395_A0949 - hypothetical protein 921 52.26 +1 975873..976844 - 323 147673864 - VC0395_A0950 - hypothetical protein 922 50.42 0 977474..978181 + 235 147674607 - VC0395_A0951 - GntR family transcriptional regulator 923 52.51 +1 978192..979088 + 298 147673607 prpB VC0395_A0952 - 2-methylisocitrate lyase 924 52.73 +1 979265..980398 + 377 147673201 prpC VC0395_A0953 - methylcitrate synthase 925 54.70 +1 980508..983114 + 868 147674815 acnA VC0395_A0954 - aconitate hydratase 926 54.36 +1 983123..984325 + 400 147674246 - VC0395_A0955 - putative AcnD-accessory protein PrpF 927 53.03 +1 984309..986207 + 632 147675302 prpE VC0395_A0956 - propionate--CoA ligase 928 46.33 0 986381..986857 + 158 147674694 - VC0395_A0957 - putative acetyltransferase 929 48.28 0 986938..988335 + 465 147673762 - VC0395_A0958 - MutT/nudix family protein 930 48.96 0 988401..989507 - 368 147673074 - VC0395_A0959 - M20A family peptidase 931 48.02 0 989932..991041 + 369 147673060 hppD VC0395_A0960 - 4-hydroxyphenylpyruvate dioxygenase 932 51.89 +1 991034..992170 + 378 147675063 - VC0395_A0961 - putative oxidoreductase 933 51.96 +1 992177..993196 + 339 147674993 - VC0395_A0962 - hypothetical protein 934 47.99 0 993193..993840 + 215 147675141 maiA VC0395_A0964 - maleylacetoacetate isomerase 935 45.85 0 993822..995147 - 441 147674364 - VC0395_A0963 - response regulator 936 46.55 0 995083..999078 + 1331 147674561 - VC0395_A0965 - sensory box sensor histidine kinase/response regulator 937 46.62 0 999184..999657 - 157 147674520 - VC0395_A0966 - putative antioxidant 938 47.94 0 1000308..1003238 + 976 147673928 - VC0395_A0967 - GGDEF family protein 939 46.30 0 1003280..1004536 - 418 147673309 - VC0395_A0968 - hypothetical protein 940 43.86 -1 1004710..1004994 + 94 147675537 - VC0395_A0969 - acylphosphatase 941 45.15 0 1005060..1005389 - 109 147674753 - VC0395_A0970 - sulfite reductase, gamma subunit 942 44.49 0 1005503..1006174 - 223 147674004 - VC0395_A0971 - hypothetical protein 943 44.97 0 1006419..1007174 - 251 147674878 - VC0395_A0972 - amino acid ABC transporter, ATP-binding protein 944 47.91 0 1007197..1008294 - 365 147674160 - VC0395_A0973 - amino acid ABC transporter, permease protein 945 46.77 0 1008297..1009502 - 401 147675096 - VC0395_A0974 - amino acid ABC transporter, permease protein 946 47.72 0 1009628..1010656 - 342 147674492 - VC0395_A0975 - amino acid ABC transporter, periplasmic amino acid-binding protein 947 45.79 0 1011111..1012049 + 312 147673528 - VC0395_A0976 - siroheme synthase component enzyme 948 47.81 0 1012115..1012936 - 273 147675343 - VC0395_A0977 - hypothetical protein 949 48.10 0 1013212..1013949 + 245 147675014 - VC0395_A0978 - hypothetical protein 950 48.71 0 1013962..1014657 + 231 147673208 exsB VC0395_A0980 - queuosine biosynthesis protein QueC 951 45.41 0 1014629..1016632 - 667 147674102 - VC0395_A0979 - GGDEF family protein 952 41.37 -1 1016803..1017051 + 82 147673712 - VC0395_A0981 - hypothetical protein 953 45.82 0 1017208..1018224 + 338 147675498 - VC0395_A0982 - hypothetical protein 954 44.29 0 1018221..1019552 + 443 147675423 - VC0395_A0983 - GGDEF family protein 955 44.64 0 1019603..1020283 - 226 147674690 - VC0395_A0984 - hypothetical protein 956 43.77 -1 1020657..1021835 + 392 147673521 - VC0395_A0985 - GGDEF family protein 957 51.53 0 1021947..1024793 - 948 147675195 - VC0395_A0986 - hypothetical protein 958 53.05 +1 1024835..1026376 - 513 147674259 - VC0395_A0987 - hypothetical protein 959 50.63 0 1026413..1026730 - 105 147674035 - VC0395_A0988 - heat shock protein 70 960 52.38 +1 1026730..1027149 - 139 147673096 - VC0395_A0989 - hypothetical protein 961 44.34 0 1027053..1027361 - 102 147675597 - VC0395_A0990 - hypothetical protein 962 45.58 0 1027898..1029481 + 527 147674636 - VC0395_A0991 - GGDEF family protein 963 47.83 0 1029499..1030029 + 176 147675170 - VC0395_A0992 - hypothetical protein 964 42.62 -1 1030031..1030213 + 60 147673784 - VC0395_A0993 - hypothetical protein 965 50.32 0 1030315..1030779 - 154 147673194 - VC0395_A0994 - hypothetical protein 966 50.14 0 1030826..1031176 - 116 147675320 - VC0395_A0995 - hypothetical protein 967 48.10 0 1031211..1031420 - 69 147674705 - VC0395_A0996 - hypothetical protein 968 50.41 0 1031378..1035307 + 1309 147674840 hrpA VC0395_A0997 - ATP-dependent RNA helicase HrpA 969 48.45 0 1035447..1035929 + 160 147675259 - VC0395_A0998 - hypothetical protein 970 52.77 +1 1036146..1037498 + 450 147673298 - VC0395_A0999 - putative chaperone 971 50.93 0 1037623..1038639 + 338 147673744 lplA VC0395_A1000 - lipoate-protein ligase A 972 47.78 0 1038875..1039054 + 59 147674263 - VC0395_A1002 - hypothetical protein 973 52.79 +1 1039032..1039982 - 316 147673870 - VC0395_A1001 - LysR family transcriptional regulator 974 52.45 +1 1040069..1041475 + 468 147674152 - VC0395_A1003 - putative multidrug transporter 975 53.14 +1 1041631..1043145 + 504 147673506 cry2 VC0395_A1004 - cryptochrome Cry2 976 48.89 0 1043291..1043605 + 104 147674676 sugE VC0395_A1005 - sugE protein 977 42.72 -1 1043660..1044895 - 411 147673930 - VC0395_A1006 - methyl-accepting chemotaxis protein 978 42.52 -1 1044903..1045283 - 126 147673810 cheY-1 VC0395_A1007 - chemotaxis protein CheY 979 43.04 -1 1045276..1045512 - 78 147673237 - VC0395_A1008 - hypothetical protein 980 46.02 0 1045526..1047811 - 761 147675706 cheA-1 VC0395_A1009 - chemotaxis protein CheA 981 44.27 0 1047808..1048182 - 124 147674402 cheY-2 VC0395_A1010 - chemotaxis protein CheY 982 40.66 -1 1048179..1049024 - 281 147674925 cheR-1 VC0395_A1011 - chemotaxis protein methyltransferase CheR 983 45.21 0 1049035..1049691 - 218 147675588 - VC0395_A1012 - hypothetical protein 984 48.38 0 1049678..1050754 - 358 147675091 cheB-1 VC0395_A1013 - protein-glutamate methylesterase CheB 985 45.04 0 1050775..1052337 - 520 147674323 - VC0395_A1014 - putative purine-binding chemotaxis protein CheW 986 44.86 0 1052350..1054275 - 641 147673937 - VC0395_A1015 - methyl-accepting chemotaxis protein 987 44.92 0 1054867..1056558 + 563 147673332 - VC0395_A1016 - methyl-accepting chemotaxis protein 988 44.50 0 1056637..1057953 + 438 147675551 - VC0395_A1017 - methyl-accepting chemotaxis protein 989 48.99 0 1058135..1059328 + 397 147674915 rhlE-1 VC0395_A1018 - ATP-dependent RNA helicase RhlE 990 43.95 -1 1059387..1059989 - 200 147674524 - VC0395_A1019 - TetR family transcriptional regulator 991 48.87 0 1060096..1061550 + 484 147673563 - VC0395_A1020 - putative multidrug resistance protein 992 50.42 0 1061564..1062751 + 395 147673357 vceA VC0395_A1021 - multidrug resistance protein VceA 993 47.01 0 1062761..1064296 + 511 147673125 vceB VC0395_A1022 - multidrug resistance protein VceB 994 44.67 0 1064371..1066107 - 578 147675234 - VC0395_A1023 - methyl-accepting chemotaxis protein 995 48.19 0 1066329..1067903 - 524 147674997 - VC0395_A1024 - thermostable carboxypeptidase 1 996 49.71 0 1068101..1068619 + 172 147674396 hcp-2 VC0395_A1025 - hcp protein 997 49.85 0 1068747..1072034 + 1095 147673444 vgrG-1 VC0395_A1026 - vgrG protein 998 42.86 -1 1072169..1073029 + 286 147674556 - VC0395_A1027 - hypothetical protein 999 39.30 -2 1073032..1074957 + 641 147673623 - VC0395_A1028 - hypothetical protein 1000 34.68 -2 1074954..1075697 + 247 147673058 - VC0395_A1029 - hypothetical protein 1001 40.11 -1 1075842..1076579 + 245 147675173 - VC0395_A1030 - hypothetical protein 1002 44.76 0 1076667..1077305 + 212 147674879 - VC0395_A1031 - hypothetical protein 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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