version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 810 47.31 0 851569..852126 + 185 147673568 pgsA VC0395_A0835 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 811 47.54 0 853019..854137 + 372 147674755 - VC0395_A0841 - GGDEF family protein 812 50.62 0 854134..854619 - 161 147675571 - VC0395_A0840 - hypothetical protein 813 45.30 0 854762..854878 + 38 147675174 - VC0395_A0842 - hypothetical protein 814 50.20 0 854910..855893 + 327 147673076 pheS VC0395_A0843 - phenylalanyl-tRNA synthetase subunit alpha 815 52.01 +1 855920..858307 + 795 147673806 pheT VC0395_A0844 - phenylalanyl-tRNA synthetase subunit beta 816 40.00 -2 858590..858724 + 44 147674752 - VC0395_A0845 - hypothetical protein 817 47.14 0 858746..859042 + 98 147673436 ihfA VC0395_A0846 - integration host factor subunit alpha 818 47.82 0 859171..859950 - 259 147674214 - VC0395_A0847 - hypothetical protein 819 36.30 -2 860017..860151 - 44 147675016 - VC0395_A0848 - hypothetical protein 820 49.01 0 860419..861075 + 218 147675652 - VC0395_A0849 - thiopurine S-methyltransferase 821 52.03 +1 861168..862349 - 393 147673455 purT VC0395_A0850 - phosphoribosylglycinamide formyltransferase 2 822 49.43 0 862497..863372 - 291 147674190 - VC0395_A0851 - hypothetical protein 823 50.23 0 863531..864418 - 295 147675337 cdd VC0395_A0852 - cytidine deaminase 824 51.26 0 864588..865262 - 224 147675623 - VC0395_A0853 - hypothetical protein 825 47.44 0 865253..865642 - 129 147675019 - VC0395_A0854 - hypothetical protein 826 50.88 0 865659..867083 - 474 147674379 sbcB VC0395_A0855 - exonuclease I 827 50.42 0 867229..868644 - 471 147673589 - VC0395_A0856 - sodium/dicarboxylate symporter 828 49.44 0 868948..869394 + 148 147675201 - VC0395_A0857 - PilB-related protein 829 41.23 -1 869608..869721 + 37 147674708 - VC0395_A0858 - hypothetical protein 830 52.43 +1 869921..871030 + 369 147673919 cobT VC0395_A0859 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 831 50.00 0 871030..871815 + 261 147674142 cobS VC0395_A0860 - cobalamin synthase 832 52.22 +1 871824..872363 + 179 147673396 cobU VC0395_A0861 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 833 52.24 +1 872370..872972 + 200 147674014 - VC0395_A0862 - putative alpha-ribazole-5`-phosphate phosphatase CobC 834 49.95 0 873288..874316 + 342 147673220 astE VC0395_A0863 - succinylglutamate desuccinylase 835 52.88 +1 874385..875392 + 335 147675213 - VC0395_A0864 - vtamin B12-transporter permease 836 51.06 0 875379..876134 + 251 147674550 - VC0395_A0865 - vitamin B12-transporter ATPase 837 44.62 0 876519..877094 - 191 147674394 - VC0395_A0866 - hypothetical protein 838 42.17 -1 877273..877668 - 131 147673625 - VC0395_A0867 - hypothetical protein 839 50.22 0 877716..879326 - 536 147675614 - VC0395_A0868 - methyl-accepting chemotaxis protein 840 47.17 0 879557..880069 - 170 147674868 - VC0395_A0869 - hypothetical protein 841 46.00 0 880335..881234 - 299 147674372 - VC0395_A0870 - putative lipoprotein 842 48.96 0 881398..882645 + 415 147673608 - VC0395_A0871 - CinA family protein 843 45.49 0 882895..883149 + 84 147675472 - VC0395_A0872 - hypothetical protein 844 45.16 0 883347..883625 - 92 147675378 - VC0395_A0873 - putative iron-sulfur cluster-binding protein 845 46.24 0 883625..884794 - 389 147674333 nrdB VC0395_A0874 - ribonucleotide-diphosphate reductase subunit beta 846 48.82 0 884854..887139 - 761 147674951 nrdA VC0395_A0875 - ribonucleotide-diphosphate reductase subunit alpha 847 48.78 0 887588..888325 - 245 147675156 ubiG VC0395_A0876 - 3-demethylubiquinone-9 3-methyltransferase 848 51.17 0 888677..891361 + 894 147673690 gyrA VC0395_A0877 - DNA gyrase, subunit A 849 49.55 0 891574..892572 + 332 147673988 - VC0395_A0878 - hypothetical protein 850 47.11 0 892599..893498 - 299 147674578 - VC0395_A0879 - AraC/XylS family transcriptional regulator 851 48.64 0 893749..894963 + 404 147673481 - VC0395_A0880 - hypothetical protein 852 46.89 0 895146..895322 + 58 147674094 - VC0395_A0881 - hypothetical protein 853 45.47 0 895493..896143 + 216 147673139 ribA VC0395_A0882 - GTP cyclohydrolase II 854 50.00 0 896278..897585 + 435 147673863 - VC0395_A0883 - putative iron-regulated protein A 855 52.31 +1 897792..899177 + 461 147674942 - VC0395_A0884 - hypothetical protein 856 52.58 +1 899187..900194 + 335 147675735 - VC0395_A0885 - putative lipoprotein 857 53.00 +1 900175..901257 + 360 147675454 - VC0395_A0886 - hypothetical protein 858 48.00 0 901504..903078 + 524 147674156 - VC0395_A0887 - hypothetical protein 859 48.09 0 903224..903772 + 182 147673878 - VC0395_A0888 - putative lipoprotein 860 51.29 0 903836..904492 + 218 147675111 - VC0395_A0890 - glyoxylase II family protein 861 49.09 0 904486..905202 - 238 147674674 - VC0395_A0889 - hypothetical protein 862 51.93 +1 905306..905719 + 137 147673685 - VC0395_A0891 - hypothetical protein 863 48.67 0 905994..907199 + 401 147675043 - VC0395_A0892 - extracellular solute-binding protein 864 46.25 0 907301..907834 + 177 147674036 - VC0395_A0893 - hypothetical protein 865 49.84 0 907844..909127 + 427 147673498 - VC0395_A0894 - hypothetical protein 866 46.90 0 909234..910589 + 451 147675218 - VC0395_A0895 - sensor histidine kinase 867 47.47 0 910570..911220 + 216 147674446 - VC0395_A0896 - LuxR family transcriptional regulator 868 49.79 0 911222..911701 - 159 147673978 - VC0395_A0897 - MarR family transcriptional regulator 869 47.94 0 912058..913680 + 540 147673331 - VC0395_A0898 - BCCT family transporter 870 44.75 0 913846..915141 - 431 147675102 - VC0395_A0899 - hypothetical protein 871 41.18 -1 915384..915689 + 101 147674511 celA VC0395_A0900 - PTS system, cellobiose-specific IIB component 872 45.79 0 915768..917108 + 446 147674956 celB VC0395_A0901 - PTS system, cellobiose-specific IIC component 873 42.86 -1 917155..917490 + 111 147675200 celC VC0395_A0902 - PTS system, cellobiose-specific IIA component 874 46.18 0 917472..918794 + 440 147674231 celF VC0395_A0903 - 6-phospho-beta-glucosidase 875 44.53 0 918817..919575 + 252 147673646 - VC0395_A0904 - hypothetical protein 876 49.27 0 919676..920698 + 340 147674834 - VC0395_A0905 - LacI family transcription regulator 877 51.06 0 920845..923010 - 721 147675546 mdoH VC0395_A0906 - glucosyltransferase MdoH 878 48.41 0 923029..924666 - 545 147675383 mdoG VC0395_A0907 - glucan biosynthesis protein G 879 48.84 0 925059..926960 + 633 147673234 - VC0395_A0908 - methyl-accepting chemotaxis protein 880 50.35 0 927092..927802 - 236 147673833 - VC0395_A0909 - DNA polymerase III subunit epsilon 881 47.65 0 927799..929712 - 637 147674424 - VC0395_A0910 - hypothetical protein 882 48.22 0 929993..931228 - 411 147675573 aspC VC0395_A0911 - aromatic amino acid aminotransferase 883 39.25 -2 931389..931574 - 61 147674157 - VC0395_A0912 - hypothetical protein 884 48.41 0 931546..933024 - 492 147674798 - VC0395_A0913 - hypothetical protein 885 49.00 0 933533..934381 + 282 147675443 thiD VC0395_A0914 - phosphomethylpyrimidine kinase 886 48.69 0 934447..935892 - 481 147673141 asnC VC0395_A0915 - asparaginyl-tRNA synthetase 887 46.14 0 935994..937625 - 543 147673794 - VC0395_A0916 - methyl-accepting chemotaxis protein 888 44.44 0 938023..938391 + 122 147674632 - VC0395_A0917 - putative 6-pyruvoyl tetrahydrobiopterin synthase 889 49.63 0 938480..939841 - 453 147675128 sdaA-1 VC0395_A0918 - L-serine dehydratase 1 890 47.05 0 939934..941187 - 417 147673147 sdaC-1 VC0395_A0919 - serine transporter 891 46.18 0 941486..942100 - 204 147673578 - VC0395_A0920 - MutT/nudix family protein 892 48.87 0 942297..943673 - 458 147674330 pabB VC0395_A0921 - para-aminobenzoate synthase, component I 893 51.12 0 943849..945366 + 505 147673955 - VC0395_A0922 - putative fumarate hydratase, class I 894 39.25 -2 945515..945700 + 61 147674531 - VC0395_A0923 - hypothetical protein 895 51.46 0 945925..947298 + 457 147675160 - VC0395_A0924 - hypothetical protein 896 50.88 0 947295..948314 + 339 147673702 - VC0395_A0925 - hypothetical protein 897 48.83 0 948428..949969 + 513 147674299 tyrR VC0395_A0926 - transcriptional regulator TyrR 898 45.31 0 949969..950544 + 191 147674891 rimJ VC0395_A0927 - ribosomal-protein-alanine acetyltransferase 899 50.84 0 950639..951112 + 157 147675547 - VC0395_A0928 - hypothetical protein 900 50.97 0 951180..952058 - 292 147673345 - VC0395_A0929 - hypothetical protein 901 49.49 0 952179..953465 - 428 147673980 - VC0395_A0930 - alanine racemase 902 48.65 0 953514..955145 - 543 147674508 - VC0395_A0931 - methyl-accepting chemotaxis protein 903 47.34 0 955479..956942 + 487 147674466 - VC0395_A0932 - putative transporter 904 49.78 0 956952..958301 + 449 147675282 - VC0395_A0933 - sensor histidine kinase 905 49.06 0 958270..958746 + 158 147673496 - VC0395_A0934 - putative chemotaxis protein CheY 906 48.86 0 958774..959694 - 306 147674095 - VC0395_A0935 - hypothetical protein 907 46.90 0 959792..960565 - 257 147673427 ompV VC0395_A0936 - outer membrane protein OmpV 908 46.71 0 960778..962100 - 440 147674098 - VC0395_A0937 - sensor histidine kinase 909 47.09 0 962126..962830 - 234 147673787 - VC0395_A0938 - DNA-binding response regulator 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.