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Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 684 49.76 0 732389..733021 + 210 147673838 hisI VC0395_A0709 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 685 47.65 0 733222..734094 - 290 147674615 - VC0395_A0710 - pseudouridine synthase family 1 protein 686 49.15 0 734255..736480 + 741 147673535 icd VC0395_A0711 - isocitrate dehydrogenase, NADP-dependent, monomeric type 687 45.89 0 736579..736809 - 76 147674134 cspD VC0395_A0712 - cold shock-like protein CspD 688 42.37 -1 737273..737593 + 106 147674267 clpS VC0395_A0713 - ATP-dependent Clp protease adaptor protein ClpS 689 48.66 0 737632..739902 + 756 147674845 clpA VC0395_A0714 - ATP-dependent Clp protease ATP-binding subunit 690 47.35 0 739971..741647 - 558 147675251 - VC0395_A0715 - hypothetical protein 691 44.09 0 741849..742127 - 92 147673092 grxA VC0395_A0716 - glutaredoxin 1 692 51.69 0 742400..743668 + 422 147673279 - VC0395_A0717 - iron-containing alcohol dehydrogenase 693 46.32 0 743759..744613 - 284 147674605 - VC0395_A0718 - DNA-binding transcriptional regulator HexR 694 48.27 0 744921..746567 - 548 147674182 - VC0395_A0719 - putative glutamate decarboxylase 695 46.04 0 746677..747282 - 201 147673442 - VC0395_A0720 - hypothetical protein 696 48.12 0 747375..748280 - 301 147675758 - VC0395_A0721 - hypothetical protein 697 44.12 0 748301..749236 - 311 147675342 - VC0395_A0722 - hypothetical protein 698 45.81 0 749578..750186 + 202 147674335 - VC0395_A0723 - hypothetical protein 699 50.64 0 750282..750830 - 182 147673750 - VC0395_A0724 - hypothetical protein 700 46.39 0 751021..751518 - 165 147673334 - VC0395_A0725 - response regulator 701 46.57 0 751515..753470 - 651 147674922 - VC0395_A0726 - response regulator 702 47.24 0 753693..754958 + 421 147674618 - VC0395_A0727 - hypothetical protein 703 48.77 0 755035..756174 + 379 147674623 serC VC0395_A0728 - phosphoserine aminotransferase 704 51.11 0 756255..757244 - 329 147674522 - VC0395_A0729 - hypothetical protein 705 49.11 0 757244..758752 - 502 147675098 - VC0395_A0730 - hypothetical protein 706 49.05 0 758761..759498 - 245 147673374 - VC0395_A0731 - putative lipoprotein 707 50.62 0 759618..760589 - 323 147673964 - VC0395_A0732 - hypothetical protein 708 49.80 0 760701..761441 - 246 147675409 - VC0395_A0733 - hypothetical protein 709 51.95 +1 761567..762436 - 289 147673414 - VC0395_A0734 - hypothetical protein 710 50.17 0 762728..764503 + 591 147674215 aspS VC0395_A0735 - aspartyl-tRNA synthetase 711 48.88 0 764600..765178 + 192 147674995 tdk VC0395_A0736 - thymidine kinase 712 49.67 0 765280..766038 - 252 147674816 - VC0395_A0737 - proton/glutamate symporter 713 43.15 -1 766076..766615 - 179 147675613 - VC0395_A0738 - hypothetical protein 714 47.30 0 766615..767853 - 412 147673426 - VC0395_A0739 - hypothetical protein 715 49.15 0 767853..768440 - 195 147674029 - VC0395_A0740 - hypothetical protein 716 53.56 +1 768425..769492 - 355 147674642 - VC0395_A0741 - hypothetical protein 717 50.67 0 769482..769931 - 149 147675244 - VC0395_A0742 - phage protein GP46 718 47.64 0 769934..770548 - 204 147673123 - VC0395_A0743 - bacteriophage Mu Gp45 protein 719 52.00 +1 770545..771621 - 358 147675009 - VC0395_A0744 - bacteriophage Mu P protein 720 52.95 +1 771614..772933 - 439 147673639 - VC0395_A0745 - DNA circulation protein 721 51.77 +1 772945..774696 - 583 147675502 - VC0395_A0746 - phage tail tape measure family protein 722 53.33 +1 774822..775166 - 114 147674829 - VC0395_A0747 - hypothetical protein 723 51.41 0 775166..775519 - 117 147673515 - VC0395_A0748 - tail tube protein 724 53.00 +1 775534..777018 - 494 147674078 - VC0395_A0749 - bacteriophage Mu tail sheath protein (GpL) 725 51.24 0 777021..777221 - 66 147673463 - VC0395_A0750 - hypothetical protein 726 52.50 +1 777235..777834 - 199 147675697 - VC0395_A0751 - hypothetical protein 727 50.64 0 777831..778373 - 180 147675053 - VC0395_A0752 - phage virion morphogenesis protein 728 50.80 0 778373..778807 - 144 147673774 - VC0395_A0753 - hypothetical protein 729 51.56 0 778813..779388 - 191 147673185 - VC0395_A0754 - hypothetical protein 730 50.33 0 779455..780354 - 299 147673447 - VC0395_A0755 - major head subunit 731 49.15 0 780357..780824 - 155 147674740 - VC0395_A0756 - I protein 732 49.48 0 780896..781279 - 127 147673649 - VC0395_A0757 - I protein 733 41.05 -1 781645..781929 - 94 147674234 - VC0395_A0758 - hypothetical protein 734 44.50 0 781929..782564 - 211 147675209 - VC0395_A0759 - hypothetical protein 735 49.71 0 782561..783073 - 170 147673069 - VC0395_A0760 - hypothetical protein 736 49.80 0 783070..783318 - 82 147673363 - VC0395_A0761 - hypothetical protein 737 51.68 0 783330..784103 - 257 147673987 - VC0395_A0762 - F protein 738 54.62 +1 784096..785655 - 519 147674836 - VC0395_A0763 - hypothetical protein 739 53.26 +1 785652..787217 - 521 147675466 - VC0395_A0764 - portal protein 740 52.58 +1 787218..787799 - 193 147674512 - VC0395_A0765 - protein gp27 741 51.20 0 787811..788101 - 96 147675434 - VC0395_A0766 - hypothetical protein 742 45.33 0 788110..788409 - 99 147673065 - VC0395_A0767 - hypothetical protein 743 48.92 0 788409..788639 - 76 147674186 - VC0395_A0768 - hypothetical protein 744 54.94 +1 788636..789232 - 198 147673971 - VC0395_A0769 - hypothetical protein 745 50.86 0 789208..789498 - 96 147675474 - VC0395_A0770 - hypothetical protein 746 53.01 +1 789498..790046 - 182 147675152 - VC0395_A0771 - hypothetical protein 747 45.80 0 790131..790547 - 138 147673198 - VC0395_A0772 - positive regulator of late transcription 748 40.96 -1 790626..790874 - 82 147674987 - VC0395_A0773 - hypothetical protein 749 48.19 0 790861..791439 - 192 147675749 - VC0395_A0774 - protein gp16 750 52.99 +1 791653..791886 - 77 147673400 - VC0395_A0775 - hypothetical protein 751 55.74 +2 791966..792496 - 176 147674194 - VC0395_A0776 - hypothetical protein 752 44.80 0 792493..792963 - 156 147673916 - VC0395_A0777 - hypothetical protein 753 53.03 +1 792960..793157 - 65 147673871 - VC0395_A0778 - hypothetical protein 754 47.33 0 793141..793383 - 80 147673101 - VC0395_A0779 - hypothetical protein 755 52.38 +1 793376..793648 - 90 147673598 - VC0395_A0780 - hypothetical protein 756 51.22 0 793658..794272 - 204 147674863 - VC0395_A0781 - hypothetical protein 757 45.13 0 794259..794453 - 64 147674083 - VC0395_A0782 - hypothetical protein 758 49.18 0 794428..794793 - 121 147673326 - VC0395_A0783 - hypothetical protein 759 47.17 0 794803..795243 - 146 147675301 - VC0395_A0784 - hypothetical protein 760 49.78 0 795253..795477 - 74 147673940 - VC0395_A0785 - hypothetical protein 761 54.60 +1 795485..796429 - 314 147673212 - VC0395_A0786 - DNA transposition protein 762 52.74 +1 796456..798459 - 667 147675169 - VC0395_A0787 - transposase 763 46.22 0 798471..798695 - 74 147674276 - VC0395_A0788 - hypothetical protein 764 45.66 0 798848..799585 + 245 147673724 - VC0395_A0789 - prophage MuSo2, Cro/CI family transcriptional regulator 765 48.34 0 799830..800402 - 190 147674225 - VC0395_A0790 - proton/glutamate symporter 766 51.55 0 800718..801524 - 268 147673648 trpA VC0395_A0791 - tryptophan synthase subunit alpha 767 50.46 0 801524..802714 - 396 147675541 trpB VC0395_A0792 - tryptophan synthase subunit beta 768 49.86 0 802755..804164 - 469 147674842 trpC/F VC0395_A0793 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 769 52.15 +1 804170..805168 - 332 147674592 trpD VC0395_A0794 - anthranilate phosphoribosyltransferase 770 52.78 +1 805189..805800 - 203 147673994 trpG VC0395_A0795 - anthranilate synthase component II 771 51.34 0 805797..807368 - 523 147673289 trpE VC0395_A0796 - anthranilate synthase component I 772 45.05 0 807502..807612 - 36 147675241 - VC0395_A0797 - putative trp operon leader peptide 773 49.60 0 807704..808576 + 290 147674944 - VC0395_A0798 - hypothetical protein 774 50.24 0 808579..809199 + 206 147674311 - VC0395_A0799 - hypothetical protein 775 51.76 +1 809332..810297 + 321 147673214 - VC0395_A0800 - pseudouridine synthase family 1 protein 776 51.86 +1 810465..812186 - 573 147675396 cydC VC0395_A0801 - cysteine/glutathione ABC transporter membrane/ATP-binding component 777 50.62 0 812179..813966 - 595 147675398 cydD VC0395_A0802 - cysteine/glutathione ABC transporter membrane/ATP-binding component 778 50.26 0 814086..815042 - 318 147674572 trxB VC0395_A0803 - thioredoxin reductase 779 48.33 0 815517..816176 + 219 147673493 - VC0395_A0804 - hypothetical protein 780 51.40 0 816151..817401 + 416 147675526 - VC0395_A0805 - aminotransferase, class V 781 48.72 0 817659..818990 + 443 147674355 - VC0395_A0806 - GGDEF family protein 782 48.35 0 819091..819756 - 221 147673100 sanA VC0395_A0807 - sanA protein 783 47.97 0 819828..820196 - 122 147675734 - VC0395_A0808 - hypothetical protein 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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