version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2256 49.84 0 2470633..2472462 - 609 147675093 typA VC0395_A2316 - GTP-binding protein TypA 2257 43.48 -1 2472670..2472807 + 45 147673488 - VC0395_A2317 - hypothetical protein 2258 48.58 0 2472950..2474359 + 469 147673922 glnA VC0395_A2318 - glutamine synthetase 2259 48.05 0 2474537..2475127 + 196 147675080 - VC0395_A2319 - hypothetical protein 2260 48.83 0 2475260..2476324 + 354 147674817 glnL VC0395_A2320 - nitrogen regulation protein NR(II) 2261 48.61 0 2476328..2477734 + 468 147674381 ntrC VC0395_A2321 - nitrogen regulation protein NR(I) 2262 45.92 0 2477775..2480324 + 849 147673341 - VC0395_A2322 - GGDEF family protein 2263 49.15 0 2480416..2481420 + 334 147675298 add VC0395_A2323 - adenosine deaminase 2264 44.44 0 2493187..2493645 + 152 147675367 - VC0395_A2340 - RNA-binding protein 2265 47.62 0 2493611..2494408 - 265 147673599 murI VC0395_A2339 - glutamate racemase 2266 46.64 0 2494801..2496408 + 535 147674600 - VC0395_A2341 - alkaline serine protease 2267 43.25 -1 2496481..2498316 - 611 147674843 - VC0395_A2342 - TonB-dependent receptor 2268 37.82 -2 2499213..2499368 + 51 147673903 - VC0395_A2343 - hypothetical protein 2269 33.33 -2 2499840..2499977 + 45 147674060 - VC0395_A2344 - hypothetical protein 2270 36.32 -2 2500208..2500675 + 155 147675643 - VC0395_A2346 - hypothetical protein 2271 43.30 -1 2500632..2501474 - 280 147673499 - VC0395_A2345 - transposase 2272 46.38 0 2501523..2501660 - 45 147673830 - VC0395_A2347 - transposase 2273 40.08 -1 2501733..2502221 + 162 147673891 - VC0395_A2348 - hypothetical protein 2274 45.24 0 2502438..2502647 - 69 147673117 - VC0395_A2349 - hypothetical protein 2275 39.81 -2 2502754..2503293 + 179 147675439 - VC0395_A2350 - hypothetical protein 2276 41.82 -1 2503295..2504602 + 435 147674647 - VC0395_A2351 - protein HipA 2277 39.71 -2 2504664..2504867 + 67 147674905 - VC0395_A2352 - hypothetical protein 2278 42.42 -1 2505023..2505385 + 120 147674920 - VC0395_A2353 - hypothetical protein 2279 40.58 -1 2505523..2507220 + 565 147675720 - VC0395_A2354 - hypothetical protein 2280 40.67 -1 2507217..2508593 + 458 147673584 - VC0395_A2355 - hypothetical protein 2281 40.78 -1 2508852..2510663 - 603 147674505 - VC0395_A2356 - hypothetical protein 2282 38.97 -2 2510667..2511908 - 413 147673307 - VC0395_A2357 - hypothetical protein 2283 38.82 -2 2512289..2514112 - 607 147673629 - VC0395_A2358 - hypothetical protein 2284 44.44 0 2514109..2514981 - 290 147674397 orfB VC0395_A2359 - transposase OrfAB, subunit B 2285 43.19 -1 2514978..2515322 - 114 147674790 orfA VC0395_A2360 - transposase OrfAB, subunit A 2286 38.76 -2 2515329..2516267 - 312 147673405 - VC0395_A2361 - hypothetical protein 2287 43.92 -1 2516604..2517170 - 188 147675219 - VC0395_A2362 - DNA-invertase 2288 39.85 -2 2517353..2517889 - 178 147674449 - VC0395_A2363 - hypothetical protein 2289 39.27 -2 2517893..2520082 - 729 147674376 - VC0395_A2364 - site-specific recombinase, phage integrase family protein 2290 40.57 -1 2520094..2522553 - 819 147675616 - VC0395_A2365 - hypothetical protein 2291 40.71 -1 2522558..2523967 - 469 147674930 - VC0395_A2366 - MutL protein 2292 47.84 0 2524317..2525426 + 369 147674711 trmA VC0395_A2367 - tRNA (uracil-5-)-methyltransferase 2293 48.12 0 2525463..2525834 - 123 147673456 - VC0395_A2368 - hypothetical protein 2294 51.87 +1 2525874..2526515 - 213 147675303 - VC0395_A2369 - DNA-binding transcriptional repressor FabR 2295 49.39 0 2526823..2528223 + 466 147674666 - VC0395_A2370 - soluble pyridine nucleotide transhydrogenase 2296 49.94 0 2528425..2529285 - 286 147674371 rpoH VC0395_A2371 - RNA polymerase factor sigma-32 2297 48.74 0 2529455..2530447 - 330 147675580 ftsX VC0395_A2372 - cell division protein FtsX 2298 50.85 0 2530437..2531138 - 233 147675112 ftsE VC0395_A2373 - cell division ATP-binding protein FtsE 2299 49.83 0 2531160..2532323 - 387 147673157 ftsY VC0395_A2374 - signal recognition particle-docking protein FtsY 2300 49.83 0 2532527..2533126 + 199 147674236 - VC0395_A2375 - hypothetical protein 2301 44.57 0 2533123..2533389 + 88 147674467 - VC0395_A2376 - hypothetical protein 2302 48.41 0 2533438..2534067 - 209 147675359 - VC0395_A2377 - hypothetical protein 2303 27.01 -2 2534184..2534357 - 57 147673177 - VC0395_A2378 - hypothetical protein 2304 43.09 -1 2534945..2535313 - 122 147673461 - VC0395_A2379 - hypothetical protein 2305 45.45 0 2535518..2535847 + 109 147674059 - VC0395_A2380 - hypothetical protein 2306 46.28 0 2536017..2536487 + 156 147674470 - VC0395_A2381 - DPS family protein 2307 54.17 +1 2536540..2536659 + 39 147673473 - VC0395_A2382 - hypothetical protein 2308 48.49 0 2536667..2537893 - 408 147674101 - VC0395_A2383 - hypothetical protein 2309 47.90 0 2537913..2538530 - 205 147675050 rhtB VC0395_A2384 - homoserine/homoserine lactone efflux protein 2310 47.00 0 2538605..2539621 + 338 147675702 lypA VC0395_A2385 - lysophospholipase L2 2311 47.95 0 2539736..2540563 + 275 147675232 - VC0395_A2386 - hypothetical protein 2312 52.43 +1 2540847..2542391 + 514 147673319 - VC0395_A2387 - putative lipoprotein 2313 54.77 +1 2542388..2542984 + 198 147673895 - VC0395_A2388 - hypothetical protein 2314 52.01 +1 2543017..2545506 - 829 147674826 - VC0395_A2389 - GGDEF family protein 2315 52.08 +1 2545616..2546335 - 239 147675542 - VC0395_A2390 - hypothetical protein 2316 51.82 +1 2546338..2547273 - 311 147673673 xerC VC0395_A2391 - site-specific tyrosine recombinase XerC 2317 52.50 +1 2547242..2547940 - 232 147673737 - VC0395_A2392 - hypothetical protein 2318 52.23 +1 2547954..2548784 - 276 147673333 dapF VC0395_A2393 - diaminopimelate epimerase 2319 50.40 0 2548796..2550049 - 417 147674363 lysA VC0395_A2394 - diaminopimelate decarboxylase 2320 41.67 -1 2550082..2550297 - 71 147673485 lppL VC0395_A2395 - lipopeptide 2321 48.57 0 2550274..2550588 + 104 147674100 cyaY VC0395_A2396 - frataxin-like protein 2322 48.82 0 2550694..2553225 - 843 147673490 cyaA VC0395_A2397 - adenylate cyclase 2323 54.19 +1 2553564..2554517 + 317 147675270 hemC VC0395_A2398 - porphobilinogen deaminase 2324 50.32 0 2554563..2555345 + 260 147674713 hemD VC0395_A2399 - uroporphyrinogen-III synthase 2325 52.00 +1 2555329..2556528 + 399 147673752 - VC0395_A2400 - putative uroporphyrin-III C-methyltransferase 2326 50.79 0 2556525..2557721 + 398 147673163 hemY VC0395_A2401 - hemY protein 2327 48.02 0 2557785..2559227 - 480 147675179 hemN VC0395_A2402 - coproporphyrinogen III oxidase 2328 50.00 0 2559312..2559803 - 163 147674399 - VC0395_A2403 - hypothetical protein 2329 51.18 0 2559810..2560358 - 182 147673620 - VC0395_A2404 - hypothetical protein 2330 46.94 0 2560358..2561026 - 222 147675609 - VC0395_A2405 - methyltransferase-related protein 2331 48.66 0 2561198..2561869 - 223 147674795 cycA VC0395_A2406 - cytochrome c4 2332 47.51 0 2561967..2562629 + 220 147674030 - VC0395_A2407 - GTPase EngB 2333 44.44 0 2562979..2563113 - 44 147673278 - VC0395_A2408 - hypothetical protein 2334 54.39 +1 2563310..2563423 + 37 147673233 - VC0395_A2410 - hypothetical protein 2335 50.16 0 2563376..2566180 - 934 147675220 polI VC0395_A2409 - DNA polymerase I 2336 35.51 -2 2566233..2566370 + 45 147675240 - VC0395_A2411 - hypothetical protein 2337 43.06 -1 2566889..2567320 - 143 147673349 - VC0395_A2412 - hypothetical protein 2338 49.62 0 2567424..2568467 - 347 147673839 hemB VC0395_A2413 - delta-aminolevulinic acid dehydratase 2339 47.41 0 2568454..2568588 + 44 147674917 - VC0395_A2414 - hypothetical protein 2340 45.96 0 2568644..2569411 + 255 147675353 - VC0395_A2415 - hypothetical protein 2341 46.11 0 2570172..2570492 + 106 147674304 glpE VC0395_A2416 - thiosulfate sulfurtransferase 2342 48.32 0 2570499..2571332 + 277 147675060 glpG VC0395_A2417 - glpG protein 2343 51.67 0 2571707..2573686 + 659 147673102 - VC0395_A2418 - methyl-accepting chemotaxis protein 2344 45.74 0 2573806..2574216 - 136 147673890 - VC0395_A2419 - flagellar basal body-associated protein FliL-like protein 2345 46.74 0 2574408..2574959 + 183 147674053 ubiC VC0395_A2420 - chorismate--pyruvate lyase 2346 49.59 0 2574960..2575814 + 284 147674415 ubiA VC0395_A2421 - 4-hydroxybenzoate octaprenyltransferase 2347 51.60 0 2575890..2578325 - 811 147675490 plsB VC0395_A2422 - glycerol-3-phosphate acyltransferase 2348 52.06 +1 2578636..2579265 + 209 147674841 lexA VC0395_A2423 - LexA repressor 2349 50.69 0 2579293..2580162 + 289 147674292 - VC0395_A2424 - hypothetical protein 2350 51.21 0 2580233..2581597 + 454 147673709 dinF VC0395_A2425 - DNA-damage-inducible protein F 2351 47.70 0 2581703..2582704 - 333 147673083 yhjA VC0395_A2426 - cytochrome c551 peroxidase 2352 48.47 0 2583016..2583768 - 250 147675120 - VC0395_A2427 - hypothetical protein 2353 52.99 +1 2583857..2584258 - 133 147674846 - VC0395_A2428 - sec-independent translocase 2354 44.58 0 2584262..2584510 - 82 147673969 tatA VC0395_A2429 - twin argininte translocase protein A 2355 49.11 0 2584570..2586204 - 544 147675207 ubiB VC0395_A2430 - putative ubiquinone biosynthesis protein UbiB 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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