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Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1642 46.76 0 1806253..1807548 + 431 147673936 gltA VC0395_A1678 - type II citrate synthase 1643 45.65 0 1807600..1808370 - 256 147674477 - VC0395_A1679 - hypothetical protein 1644 44.06 0 1808423..1809196 + 257 147673486 - VC0395_A1680 - hypothetical protein 1645 48.94 0 1809246..1810892 - 548 147674240 pgm VC0395_A1681 - phosphoglucomutase 1646 46.63 0 1811001..1811534 - 177 147674637 seqA VC0395_A1682 - replication initiation regulator SeqA 1647 47.67 0 1811627..1812400 + 257 147675456 - VC0395_A1683 - hydrolase 1648 45.50 0 1812496..1812717 + 73 147674606 - VC0395_A1684 - hypothetical protein 1649 46.40 0 1812766..1813293 + 175 147675417 fldA VC0395_A1685 - flavodoxin FldA 1650 50.29 0 1813367..1814056 - 229 147673045 - VC0395_A1686 - hypothetical protein 1651 48.30 0 1814062..1814502 - 146 147673796 - VC0395_A1687 - hypothetical protein 1652 50.51 0 1814618..1815496 + 292 147673570 - VC0395_A1688 - LysR family transcriptional regulator 1653 47.11 0 1815500..1816000 - 166 147673832 - VC0395_A1689 - hypothetical protein 1654 43.71 -1 1816366..1816818 + 150 147674743 fur VC0395_A1690 - ferric uptake regulator 1655 48.87 0 1816900..1817916 - 338 147675308 - VC0395_A1691 - aspartate-semialdehyde dehydrogenase 1656 49.91 0 1817897..1819060 - 387 147673968 pdxB VC0395_A1692 - erythronate-4-phosphate dehydrogenase 1657 49.92 0 1819246..1820457 - 403 147674185 fabB VC0395_A1693 - 3-oxoacyl-(acyl-carrier-protein) synthase I 1658 51.65 0 1820575..1822599 + 674 147674806 mnmC VC0395_A1694 - 5-methylaminomethyl-2-thiouridine methyltransferase 1659 50.00 0 1822677..1823204 - 175 147675722 - VC0395_A1695 - hypothetical protein 1660 51.89 +1 1823412..1823675 - 87 147675483 - VC0395_A1696 - hypothetical protein 1661 47.46 0 1823714..1824244 - 176 147673720 - VC0395_A1697 - hypothetical protein 1662 52.24 +1 1824608..1825231 + 207 147673621 - VC0395_A1698 - hypothetical protein 1663 51.01 0 1825313..1826398 - 361 147675123 aroC VC0395_A1699 - chorismate synthase 1664 49.31 0 1826628..1827572 - 314 147673603 - VC0395_A1700 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1665 50.09 0 1827627..1828187 + 186 147673917 - VC0395_A1701 - hypothetical protein 1666 50.49 0 1828195..1829325 - 376 147674451 flhB VC0395_A1702 - flagellar biosynthesis protein FlhB 1667 49.81 0 1829335..1830117 - 260 147673452 fliR VC0395_A1703 - flagellar biosynthesis protein FliR 1668 45.19 0 1830126..1830395 - 89 147674176 fliQ VC0395_A1704 - flagellar biosynthesis protein FliQ 1669 48.00 0 1830408..1831307 - 299 147674933 fliP VC0395_A1705 - flagellar biosynthesis protein FliP 1670 46.34 0 1831174..1831296 + 40 147674950 - VC0395_A1707 - hypothetical protein 1671 50.51 0 1831285..1831674 - 129 147675753 fliO VC0395_A1706 - flagellar protein FliO 1672 50.36 0 1831678..1832094 - 138 147674715 fliN VC0395_A1708 - flagellar motor switch protein 1673 49.05 0 1832159..1833208 - 349 147675314 fliM VC0395_A1709 - flagellar motor switch protein FliM 1674 51.39 0 1833216..1833719 - 167 147673204 fliL VC0395_A1710 - flagellar basal body-associated protein FliL 1675 53.04 +1 1833754..1835778 - 674 147675428 - VC0395_A1711 - putative flagellar hook-length control protein FliK 1676 47.97 0 1835799..1835921 + 40 147673118 - VC0395_A1712 - hypothetical protein 1677 45.95 0 1835942..1836385 - 147 147673876 fliJ VC0395_A1713 - flagellar biosynthesis chaperone 1678 52.65 +1 1836400..1837719 - 439 147675718 fliI VC0395_A1714 - flagellum-specific ATP synthase 1679 52.28 +1 1837723..1838535 - 270 147673698 fliH VC0395_A1715 - flagellar assembly protein H 1680 49.46 0 1838616..1839632 - 338 147674147 fliG VC0395_A1716 - flagellar motor switch protein G 1681 50.37 0 1839655..1841397 - 580 147674591 fliF VC0395_A1717 - flagellar MS-ring protein 1682 45.45 0 1841413..1841742 - 109 147675704 fliE VC0395_A1718 - flagellar hook-basal body protein FliE 1683 50.28 0 1841800..1843239 - 479 147673544 flrC VC0395_A1719 - flagellar regulatory protein C 1684 50.85 0 1843236..1844291 - 351 147675650 flrB VC0395_A1720 - flagellar regulatory protein B 1685 49.90 0 1844403..1845869 - 488 147675013 flrA VC0395_A1721 - flagellar regulatory protein A 1686 46.23 0 1846101..1846511 - 136 147673727 fliS VC0395_A1722 - flagellar protein FliS 1687 41.90 -1 1846522..1846836 - 104 147673154 - VC0395_A1723 - putative flagellar rod protein FlaI 1688 51.52 0 1846829..1848829 - 666 147675440 fliD VC0395_A1724 - flagellar capping protein 1689 48.27 0 1848851..1849312 - 153 147675482 flaG VC0395_A1725 - flagellar protein FlaG 1690 50.40 0 1849386..1850516 - 376 147674837 flaB VC0395_A1726 - flagellin 1691 48.68 0 1850752..1851885 - 377 147675484 flaD VC0395_A1727 - flagellin 1692 49.52 0 1852175..1853311 - 378 147675318 flaE VC0395_A1728 - flagellin 1693 48.95 0 1853435..1854343 - 302 147674932 - VC0395_A1729 - tyrA protein 1694 48.39 0 1854409..1854873 - 154 147673816 - VC0395_A1730 - hypothetical protein 1695 45.10 0 1855017..1855373 + 118 147673419 - VC0395_A1731 - hypothetical protein 1696 49.31 0 1855440..1855727 - 95 147675761 - VC0395_A1732 - hypothetical protein 1697 45.45 0 1855930..1856325 + 131 147673991 - VC0395_A1733 - hypothetical protein 1698 51.68 0 1856356..1857489 + 377 147674209 dapE VC0395_A1734 - succinyl-diaminopimelate desuccinylase 1699 49.04 0 1857492..1858166 + 224 147675325 - VC0395_A1735 - VanY family protein 1700 46.22 0 1858156..1858380 + 74 147674432 - VC0395_A1736 - hypothetical protein 1701 49.31 0 1858473..1859492 - 339 147674077 nlpB VC0395_A1737 - lipoprotein 1702 48.92 0 1859550..1860428 - 292 147673601 dapA VC0395_A1738 - dihydrodipicolinate synthase 1703 45.86 0 1860706..1861248 + 180 147675107 - VC0395_A1739 - putative glycine cleavage system transcriptional repressor 1704 45.94 0 1861263..1861730 + 155 147674356 bcp VC0395_A1740 - thioredoxin-dependent thiol peroxidase 1705 48.45 0 1861832..1863703 - 623 147673902 - VC0395_A1741 - methyl-accepting chemotaxis protein 1706 47.70 0 1863894..1864958 - 354 147673150 - VC0395_A1742 - putative permease PerM 1707 48.52 0 1864951..1865187 - 78 147675026 - VC0395_A1743 - hypothetical protein 1708 50.03 0 1865371..1866825 + 484 147674253 - VC0395_A1744 - hypothetical protein 1709 47.58 0 1866848..1867198 + 116 147673287 arsC VC0395_A1745 - arsenate reductase 1710 51.87 +1 1867195..1867755 + 186 147675625 wrbA VC0395_A1746 - Trp repressor-binding protein 1711 48.86 0 1867758..1868195 + 145 147674419 - VC0395_A1747 - hypothetical protein 1712 49.96 0 1868402..1869550 - 382 147673837 - VC0395_A1748 - hypothetical protein 1713 52.23 +1 1869771..1871024 + 417 147674252 uraA VC0395_A1749 - uracil permease 1714 47.20 0 1871095..1871577 - 160 147675041 - VC0395_A1750 - hypothetical protein 1715 48.26 0 1871711..1873372 - 553 147673600 ushA VC0395_A1751 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 1716 50.00 0 1873784..1874635 - 283 147674359 kdsA VC0395_A1752 - 2-dehydro-3-deoxyphosphooctonate aldolase 1717 47.60 0 1874655..1875467 - 270 147674484 - VC0395_A1753 - hypothetical protein 1718 45.83 0 1875483..1875866 - 127 147675215 - VC0395_A1754 - hypothetical protein 1719 52.03 +1 1875866..1876726 - 286 147674049 hemK VC0395_A1755 - hemK protein 1720 50.32 0 1876730..1877818 - 362 147674456 prfA VC0395_A1756 - peptide chain release factor 1 1721 50.08 0 1877848..1879107 - 419 147674777 hemA VC0395_A1757 - glutamyl-tRNA reductase 1722 46.23 0 1879248..1879883 + 211 147675171 lolB VC0395_A1758 - outer membrane lipoprotein LolB 1723 50.74 0 1879880..1880752 + 290 147673745 - VC0395_A1759 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1724 49.84 0 1880783..1881727 + 314 147673671 prsA VC0395_A1760 - ribose-phosphate pyrophosphokinase 1725 48.22 0 1881896..1882486 + 196 147675550 pth VC0395_A1761 - peptidyl-tRNA hydrolase 1726 48.63 0 1882497..1883588 + 363 147674921 - VC0395_A1762 - translation-associated GTPase 1727 38.81 -2 1885708..1886145 - 145 147673504 tnpA VC0395_A1777 - IS1004 transposase 1728 48.25 0 1886189..1886302 - 37 147673266 - VC0395_A1778 - hypothetical protein 1729 48.41 0 1886309..1887442 - 377 147675419 flaC VC0395_A1779 - flagellin 1730 48.77 0 1887997..1889136 - 379 147674518 flaA VC0395_A1780 - flagellin 1731 41.11 -1 1889285..1889464 - 59 147673159 - VC0395_A1781 - hypothetical protein 1732 47.40 0 1889544..1890737 - 397 147674282 flgL VC0395_A1782 - flagellar hook-associated protein FlgL 1733 47.95 0 1890750..1892624 - 624 147675062 flgK VC0395_A1783 - flagellar hook-associated protein FlgK 1734 48.78 0 1892804..1893742 - 312 147673638 flgJ VC0395_A1784 - peptidoglycan hydrolase 1735 50.46 0 1893753..1894838 - 361 147674065 flgI VC0395_A1785 - flagellar basal body P-ring protein 1736 49.11 0 1894929..1895714 - 261 147674828 flgH VC0395_A1786 - flagellar basal body L-ring protein 1737 48.92 0 1895729..1896517 - 262 147674573 flgG VC0395_A1787 - flagellar basal body rod protein FlgG 1738 51.60 0 1896537..1897286 - 249 147673274 flgF VC0395_A1788 - flagellar basal body rod protein FlgF 1739 47.43 0 1897469..1898773 - 434 147674037 flgE VC0395_A1789 - flagellar hook protein FlgE 1740 48.16 0 1898802..1899509 - 235 147674438 flgD VC0395_A1790 - flagellar basal body rod modification protein 1741 46.28 0 1899527..1899943 - 138 147675208 flgC VC0395_A1791 - flagellar basal body rod protein FlgC 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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