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Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1600 47.32 0 1758546..1759310 - 254 147674073 vacJ VC0395_A1636 - vacJ lipoprotein 1601 47.16 0 1759363..1760577 - 404 147675723 ccmH VC0395_A1637 - cytochrome c-type biogenesis protein CcmH 1602 46.33 0 1760580..1761056 - 158 147675051 - VC0395_A1638 - cytochrome c-type biogenesis protein CcmH 1603 45.05 0 1761053..1761607 - 184 147675010 dsbE VC0395_A1639 - thiol:disulfide interchange protein DsbE 1604 49.85 0 1761608..1763563 - 651 147674378 ccmF VC0395_A1640 - cytochrome c-type biogenesis protein CcmF 1605 47.83 0 1763560..1764042 - 160 147673770 ccmE VC0395_A1641 - cytochrome c-type biogenesis protein CcmE 1606 46.38 0 1764039..1764245 - 68 147673210 ccmD VC0395_A1642 - heme exporter protein D 1607 50.46 0 1764245..1764997 - 250 147674659 ccmC VC0395_A1643 - heme exporter protein C 1608 49.48 0 1765088..1765756 - 222 147673754 ccmB VC0395_A1644 - heme exporter protein B 1609 47.28 0 1765753..1766376 - 207 147673545 ccmA VC0395_A1645 - cytochrome c biogenesis protein CcmA 1610 47.42 0 1766750..1767253 - 167 147675281 - VC0395_A1646 - hypothetical protein 1611 45.90 0 1767229..1767753 - 174 147674307 cheW-1 VC0395_A1647 - purine-binding chemotaxis protein CheW 1612 46.80 0 1767762..1768778 - 338 147674008 - VC0395_A1648 - hypothetical protein 1613 46.20 0 1768771..1769547 - 258 147675595 - VC0395_A1649 - ParA family protein 1614 48.85 0 1769557..1770690 - 377 147674819 cheB-2 VC0395_A1650 - chemotaxis-specific methylesterase 1615 48.85 0 1770717..1773074 - 785 147674329 cheA-2 VC0395_A1651 - chemotaxis protein CheA 1616 45.28 0 1773084..1773803 - 239 147673688 cheZ VC0395_A1652 - chemotaxis protein CheZ 1617 42.24 -1 1773859..1774251 - 130 147675594 cheY-3 VC0395_A1653 - chemotaxis protein CheY 1618 45.44 0 1774273..1775007 - 244 147674794 fliA VC0395_A1654 - flagellar biosynthesis sigma factor 1619 47.77 0 1775000..1775941 - 313 147674338 - VC0395_A1655 - ParA family protein 1620 50.27 0 1775901..1777388 - 495 147673602 flhF VC0395_A1656 - flagellar biosynthesis regulator FlhF 1621 49.95 0 1777423..1779516 - 697 147675206 flhA VC0395_A1657 - flagellar biosynthesis protein FlhA 1622 49.37 0 1779848..1780321 - 157 147674345 sixA VC0395_A1658 - phosphohistidine phosphatase 1623 47.59 0 1780465..1783284 + 939 147675351 - VC0395_A1660 - peptidase insulinase family protein 1624 49.41 0 1783281..1783877 - 198 147673572 - VC0395_A1659 - hypothetical protein 1625 48.61 0 1784011..1785810 + 599 147673730 argS VC0395_A1661 - arginyl-tRNA synthetase 1626 49.32 0 1785901..1786344 + 147 147673143 - VC0395_A1662 - histidine triad family protein 1627 48.48 0 1786606..1786836 - 76 147673946 - VC0395_A1663 - hypothetical protein 1628 46.90 0 1786833..1789109 - 758 147673265 feoB VC0395_A1664 - ferrous iron transport protein B 1629 48.05 0 1789106..1789336 - 76 147675518 feoA VC0395_A1665 - ferrous iron transport protein A 1630 44.15 0 1790108..1793473 - 1121 147674890 - VC0395_A1666 - AraC/XylS family transcriptional regulator 1631 46.98 0 1793655..1794548 - 297 147674268 znuA VC0395_A1667 - zinc ABC transporter, periplasmic zinc-binding protein 1632 46.26 0 1794623..1795411 + 262 147675307 znuC VC0395_A1668 - zinc ABC transporter, ATP-binding protein 1633 49.81 0 1795404..1796186 + 260 147675495 znuB VC0395_A1669 - zinc ABC transporter, permease protein 1634 48.45 0 1796293..1797165 - 290 147673983 sucD VC0395_A1670 - succinyl-CoA synthetase subunit alpha 1635 47.47 0 1797165..1798331 - 388 147673132 sucC VC0395_A1671 - succinyl-CoA synthetase subunit beta 1636 49.22 0 1798499..1799713 - 404 147675118 sucB VC0395_A1672 - dihydrolipoamide acetyltransferase 1637 50.23 0 1799742..1802552 - 936 147675042 kgd VC0395_A1673 - alpha-ketoglutarate decarboxylase 1638 44.30 0 1802641..1803351 - 236 147674178 sdhB VC0395_A1674 - succinate dehydrogenase iron-sulfur subunit 1639 49.41 0 1803366..1805132 - 588 147673431 sdhA VC0395_A1675 - succinate dehydrogenase flavoprotein subunit 1640 43.48 -1 1805133..1805477 - 114 147674183 sdhD VC0395_A1676 - succinate dehydrogenase, hydrophobic membrane anchor protein 1641 48.09 0 1805471..1805863 - 130 147673409 sdhC VC0395_A1677 - succinate dehydrogenase cytochrome b556 large membrane subunit 1642 46.76 0 1806253..1807548 + 431 147673936 gltA VC0395_A1678 - type II citrate synthase 1643 45.65 0 1807600..1808370 - 256 147674477 - VC0395_A1679 - hypothetical protein 1644 44.06 0 1808423..1809196 + 257 147673486 - VC0395_A1680 - hypothetical protein 1645 48.94 0 1809246..1810892 - 548 147674240 pgm VC0395_A1681 - phosphoglucomutase 1646 46.63 0 1811001..1811534 - 177 147674637 seqA VC0395_A1682 - replication initiation regulator SeqA 1647 47.67 0 1811627..1812400 + 257 147675456 - VC0395_A1683 - hydrolase 1648 45.50 0 1812496..1812717 + 73 147674606 - VC0395_A1684 - hypothetical protein 1649 46.40 0 1812766..1813293 + 175 147675417 fldA VC0395_A1685 - flavodoxin FldA 1650 50.29 0 1813367..1814056 - 229 147673045 - VC0395_A1686 - hypothetical protein 1651 48.30 0 1814062..1814502 - 146 147673796 - VC0395_A1687 - hypothetical protein 1652 50.51 0 1814618..1815496 + 292 147673570 - VC0395_A1688 - LysR family transcriptional regulator 1653 47.11 0 1815500..1816000 - 166 147673832 - VC0395_A1689 - hypothetical protein 1654 43.71 -1 1816366..1816818 + 150 147674743 fur VC0395_A1690 - ferric uptake regulator 1655 48.87 0 1816900..1817916 - 338 147675308 - VC0395_A1691 - aspartate-semialdehyde dehydrogenase 1656 49.91 0 1817897..1819060 - 387 147673968 pdxB VC0395_A1692 - erythronate-4-phosphate dehydrogenase 1657 49.92 0 1819246..1820457 - 403 147674185 fabB VC0395_A1693 - 3-oxoacyl-(acyl-carrier-protein) synthase I 1658 51.65 0 1820575..1822599 + 674 147674806 mnmC VC0395_A1694 - 5-methylaminomethyl-2-thiouridine methyltransferase 1659 50.00 0 1822677..1823204 - 175 147675722 - VC0395_A1695 - hypothetical protein 1660 51.89 +1 1823412..1823675 - 87 147675483 - VC0395_A1696 - hypothetical protein 1661 47.46 0 1823714..1824244 - 176 147673720 - VC0395_A1697 - hypothetical protein 1662 52.24 +1 1824608..1825231 + 207 147673621 - VC0395_A1698 - hypothetical protein 1663 51.01 0 1825313..1826398 - 361 147675123 aroC VC0395_A1699 - chorismate synthase 1664 49.31 0 1826628..1827572 - 314 147673603 - VC0395_A1700 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1665 50.09 0 1827627..1828187 + 186 147673917 - VC0395_A1701 - hypothetical protein 1666 50.49 0 1828195..1829325 - 376 147674451 flhB VC0395_A1702 - flagellar biosynthesis protein FlhB 1667 49.81 0 1829335..1830117 - 260 147673452 fliR VC0395_A1703 - flagellar biosynthesis protein FliR 1668 45.19 0 1830126..1830395 - 89 147674176 fliQ VC0395_A1704 - flagellar biosynthesis protein FliQ 1669 48.00 0 1830408..1831307 - 299 147674933 fliP VC0395_A1705 - flagellar biosynthesis protein FliP 1670 46.34 0 1831174..1831296 + 40 147674950 - VC0395_A1707 - hypothetical protein 1671 50.51 0 1831285..1831674 - 129 147675753 fliO VC0395_A1706 - flagellar protein FliO 1672 50.36 0 1831678..1832094 - 138 147674715 fliN VC0395_A1708 - flagellar motor switch protein 1673 49.05 0 1832159..1833208 - 349 147675314 fliM VC0395_A1709 - flagellar motor switch protein FliM 1674 51.39 0 1833216..1833719 - 167 147673204 fliL VC0395_A1710 - flagellar basal body-associated protein FliL 1675 53.04 +1 1833754..1835778 - 674 147675428 - VC0395_A1711 - putative flagellar hook-length control protein FliK 1676 47.97 0 1835799..1835921 + 40 147673118 - VC0395_A1712 - hypothetical protein 1677 45.95 0 1835942..1836385 - 147 147673876 fliJ VC0395_A1713 - flagellar biosynthesis chaperone 1678 52.65 +1 1836400..1837719 - 439 147675718 fliI VC0395_A1714 - flagellum-specific ATP synthase 1679 52.28 +1 1837723..1838535 - 270 147673698 fliH VC0395_A1715 - flagellar assembly protein H 1680 49.46 0 1838616..1839632 - 338 147674147 fliG VC0395_A1716 - flagellar motor switch protein G 1681 50.37 0 1839655..1841397 - 580 147674591 fliF VC0395_A1717 - flagellar MS-ring protein 1682 45.45 0 1841413..1841742 - 109 147675704 fliE VC0395_A1718 - flagellar hook-basal body protein FliE 1683 50.28 0 1841800..1843239 - 479 147673544 flrC VC0395_A1719 - flagellar regulatory protein C 1684 50.85 0 1843236..1844291 - 351 147675650 flrB VC0395_A1720 - flagellar regulatory protein B 1685 49.90 0 1844403..1845869 - 488 147675013 flrA VC0395_A1721 - flagellar regulatory protein A 1686 46.23 0 1846101..1846511 - 136 147673727 fliS VC0395_A1722 - flagellar protein FliS 1687 41.90 -1 1846522..1846836 - 104 147673154 - VC0395_A1723 - putative flagellar rod protein FlaI 1688 51.52 0 1846829..1848829 - 666 147675440 fliD VC0395_A1724 - flagellar capping protein 1689 48.27 0 1848851..1849312 - 153 147675482 flaG VC0395_A1725 - flagellar protein FlaG 1690 50.40 0 1849386..1850516 - 376 147674837 flaB VC0395_A1726 - flagellin 1691 48.68 0 1850752..1851885 - 377 147675484 flaD VC0395_A1727 - flagellin 1692 49.52 0 1852175..1853311 - 378 147675318 flaE VC0395_A1728 - flagellin 1693 48.95 0 1853435..1854343 - 302 147674932 - VC0395_A1729 - tyrA protein 1694 48.39 0 1854409..1854873 - 154 147673816 - VC0395_A1730 - hypothetical protein 1695 45.10 0 1855017..1855373 + 118 147673419 - VC0395_A1731 - hypothetical protein 1696 49.31 0 1855440..1855727 - 95 147675761 - VC0395_A1732 - hypothetical protein 1697 45.45 0 1855930..1856325 + 131 147673991 - VC0395_A1733 - hypothetical protein 1698 51.68 0 1856356..1857489 + 377 147674209 dapE VC0395_A1734 - succinyl-diaminopimelate desuccinylase 1699 49.04 0 1857492..1858166 + 224 147675325 - VC0395_A1735 - VanY family protein 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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