version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1447 46.37 0 1590647..1591183 + 178 147673417 - VC0395_A1479 - putative ribosomal-protein-serine acetyltransferase 1448 48.89 0 1591296..1592600 - 434 147674696 ndh VC0395_A1480 - NADH dehydrogenase 1449 39.72 -2 1592686..1592826 + 46 147675275 - VC0395_A1481 - hypothetical protein 1450 43.52 -1 1592943..1593482 - 179 147673914 - VC0395_A1482 - hypothetical protein 1451 49.25 0 1593662..1594522 - 286 147673327 - VC0395_A1483 - hypothetical protein 1452 45.35 0 1594550..1595140 - 196 147673411 - VC0395_A1484 - putative lipoprotein 1453 46.15 0 1595193..1595582 - 129 147673225 - VC0395_A1485 - putative lipoprotein 1454 48.13 0 1595582..1597000 - 472 147674989 - VC0395_A1486 - hypothetical protein 1455 47.86 0 1597013..1597363 - 116 147674459 - VC0395_A1487 - histidine triad family protein 1456 48.59 0 1597596..1599614 + 672 147674132 - VC0395_A1488 - methyl-accepting chemotaxis protein 1457 48.26 0 1599784..1600935 + 383 147673346 - VC0395_A1489 - hypothetical protein 1458 44.88 0 1601170..1602009 - 279 147675341 fadR VC0395_A1490 - fatty acid metabolism regulator 1459 46.96 0 1602654..1604246 + 530 147674405 nhaB VC0395_A1491 - sodium/proton antiporter 1460 48.85 0 1604326..1604847 + 173 147674425 dsbB VC0395_A1492 - disulfide bond formation protein B 1461 49.15 0 1604923..1607805 - 960 147673704 - VC0395_A1493 - putative cell division protein FtsK 1462 42.83 -1 1607983..1608477 - 164 147675687 lrp VC0395_A1494 - leucine-responsive transcriptional regulator 1463 48.18 0 1608634..1609758 + 374 147673741 ald VC0395_A1495 - alanine dehydrogenase 1464 48.20 0 1609800..1610996 - 398 147674493 - VC0395_A1496 - hypothetical protein 1465 46.46 0 1611058..1612032 - 324 147674603 cysB VC0395_A1497 - transcriptional regulator CysB 1466 42.67 -1 1612118..1612267 - 49 147675397 - VC0395_A1498 - hypothetical protein 1467 41.44 -1 1612297..1613085 + 262 147675621 - VC0395_A1499 - hypothetical protein 1468 43.24 -1 1613147..1613923 + 258 147673611 miaE VC0395_A1500 - tRNA-(MS[2]IO[6]A)-hydroxylase 1469 48.56 0 1613981..1614676 - 231 147674982 pyrF VC0395_A1501 - orotidine 5'-phosphate decarboxylase 1470 45.47 0 1614749..1615918 - 389 147675765 - VC0395_A1502 - hypothetical protein 1471 41.49 -1 1615930..1616211 - 93 147673081 - VC0395_A1503 - hypothetical protein 1472 47.67 0 1616350..1616628 - 92 147673848 ihfB VC0395_A1504 - integration host factor subunit beta 1473 46.44 0 1616916..1618586 - 556 147673739 rpsA VC0395_A1505 - 30S ribosomal protein S1 1474 49.13 0 1618695..1619384 - 229 147673554 cmk VC0395_A1506 - cytidylate kinase 1475 46.79 0 1619555..1619866 - 103 147675214 - VC0395_A1507 - hypothetical protein 1476 46.02 0 1620001..1621860 - 619 147674490 ppiD VC0395_A1508 - peptidyl-prolyl cis-trans isomerase D 1477 48.72 0 1622013..1622285 - 90 147673385 hupB VC0395_A1509 - DNA-binding protein HU-beta 1478 48.88 0 1622469..1624829 - 786 147673301 lon VC0395_A1510 - ATP-dependent protease LA 1479 47.54 0 1624952..1626232 - 426 147674941 clpX VC0395_A1511 - ATP-dependent protease ATP-binding subunit 1480 46.43 0 1626312..1626914 - 200 147674197 clpP VC0395_A1512 - ATP-dependent Clp protease proteolytic subunit 1481 47.93 0 1627044..1628345 - 433 147673079 tig VC0395_A1513 - trigger factor 1482 39.73 -2 1628636..1628854 - 72 147675226 - VC0395_A1514 - hypothetical protein 1483 49.50 0 1628844..1630637 + 597 147675602 dctB VC0395_A1515 - C4-dicarboxylate transport sensor protein 1484 49.81 0 1630640..1631980 + 446 147673614 dctD-1 VC0395_A1516 - C4-dicarboxylate transport transcriptional regulatory protein 1485 50.37 0 1632105..1633466 - 453 147674787 dctM VC0395_A1517 - C4-dicarboxylate transport protein 1486 47.50 0 1633470..1634168 - 232 147675606 - VC0395_A1518 - putative C4-dicarboxylate transport protein DctQ 1487 48.55 0 1634200..1635198 - 332 147675592 dctP-2 VC0395_A1519 - C4-dicarboxylate-binding periplasmic protein 1488 50.43 0 1635430..1636956 - 508 147674783 - VC0395_A1520 - hypothetical protein 1489 41.52 -1 1637127..1637297 - 56 147675191 - VC0395_A1521 - hypothetical protein 1490 43.31 -1 1637459..1637929 + 156 147673221 - VC0395_A1522 - hypothetical protein 1491 43.24 -1 1637893..1639860 + 655 147673575 - VC0395_A1523 - GGDEF family protein 1492 50.33 0 1639939..1640697 + 252 147674331 - VC0395_A1524 - hypothetical protein 1493 45.45 0 1640700..1641623 + 307 147673088 - VC0395_A1525 - putative phosphatidate cytidylyltransferase 1494 46.43 0 1641631..1642302 + 223 147673855 - VC0395_A1526 - hypothetical protein 1495 46.00 0 1642392..1642841 + 149 147674814 - VC0395_A1527 - hypothetical protein 1496 47.50 0 1643135..1643755 + 206 147675617 - VC0395_A1528 - hypothetical protein 1497 47.96 0 1643802..1644464 - 220 147673644 - VC0395_A1529 - hypothetical protein 1498 46.99 0 1644777..1646072 - 431 147674426 - VC0395_A1530 - hypothetical protein 1499 49.79 0 1646627..1647562 + 311 147673213 folD VC0395_A1533 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 1500 47.80 0 1647845..1648708 + 287 147673976 pvcB VC0395_A1534 - PvcB protein 1501 48.63 0 1648693..1650156 + 487 147674769 - VC0395_A1535 - hypothetical protein 1502 43.12 -1 1650277..1651206 - 309 147675040 - VC0395_A1536 - LysR family transcriptional regulator 1503 44.44 0 1651526..1653352 + 608 147675647 pvcA VC0395_A1537 - pvcA protein 1504 52.33 +1 1653442..1655889 - 815 147673939 bisZ VC0395_A1538 - biotin sulfoxide reductase 1505 49.86 0 1655912..1657018 - 368 147673410 yecK VC0395_A1539 - cytochrome c-type protein YecK 1506 50.41 0 1657273..1659813 - 846 147675561 chiA-1 VC0395_A1540 - chitinase 1507 48.93 0 1660077..1661294 - 405 147674938 - VC0395_A1541 - NupC family protein 1508 50.32 0 1661624..1662571 - 315 147674306 - VC0395_A1542 - LysR family transcriptional regulator 1509 47.53 0 1662735..1663706 - 323 147673674 - VC0395_A1543 - putative lytic murein transglycosylase 1510 43.04 -1 1663731..1664039 - 102 147674473 - VC0395_A1544 - hypothetical protein 1511 48.57 0 1664209..1664871 + 220 147673901 minC VC0395_A1545 - septum formation inhibitor 1512 48.98 0 1664874..1665704 + 276 147673790 minD VC0395_A1546 - septum site-determining protein MinD 1513 47.73 0 1665709..1665972 + 87 147673211 minE VC0395_A1547 - cell division topological specificity factor MinE 1514 48.17 0 1666261..1666752 + 163 147675754 - VC0395_A1548 - lipoprotein 1515 45.98 0 1666819..1667316 - 165 147673775 - VC0395_A1549 - hypothetical protein 1516 48.86 0 1667297..1668172 - 291 147674189 - VC0395_A1550 - hypothetical protein 1517 44.67 0 1668366..1668956 + 196 147673509 - VC0395_A1551 - hypothetical protein 1518 49.60 0 1668960..1670840 + 626 147675506 - VC0395_A1552 - hypothetical protein 1519 36.98 -2 1670949..1671140 - 63 147673322 - VC0395_A1553 - hypothetical protein 1520 43.89 -1 1671016..1673070 + 684 147674320 - VC0395_A1554 - methyl-accepting chemotaxis protein 1521 43.41 -1 1673123..1673668 - 181 147674892 - VC0395_A1555 - transcriptional regulator 1522 51.89 +1 1673756..1674919 + 387 147674051 benE VC0395_A1556 - benzoate transport protein 1523 52.55 +1 1674948..1676378 - 476 147675543 menE VC0395_A1557 - O-succinylbenzoic acid--CoA ligase 1524 52.25 +1 1676354..1677352 - 332 147673492 menC VC0395_A1558 - O-succinylbenzoate synthase 1525 53.20 +1 1677440..1678330 - 296 147674367 menB VC0395_A1559 - naphthoate synthase 1526 50.76 0 1678331..1679122 - 263 147674495 - VC0395_A1560 - acyl-CoA thioester hydrolase YfbB 1527 53.36 +1 1679112..1680824 - 570 147675176 menD VC0395_A1561 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 1528 52.75 +1 1680821..1682128 - 435 147673372 menF VC0395_A1562 - menaquinone-specific isochorismate synthase 1529 49.88 0 1682343..1683557 + 404 147673982 - VC0395_A1563 - aminotransferase AlaT 1530 49.29 0 1683593..1684294 + 233 147675646 - VC0395_A1564 - hypothetical protein 1531 52.34 +1 1684351..1685676 + 441 147673736 dgt VC0395_A1566 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 1532 51.58 0 1685670..1686272 - 200 147673475 - VC0395_A1565 - hypothetical protein 1533 52.72 +1 1686276..1686827 + 183 147673155 - VC0395_A1567 - hypothetical protein 1534 48.54 0 1686903..1688750 - 615 147674907 - VC0395_A1568 - putative peptidase 1535 50.09 0 1688963..1690108 - 381 147675516 rnd VC0395_A1569 - ribonuclease D 1536 50.56 0 1690194..1691894 - 566 147673701 fadD VC0395_A1570 - long-chain-fatty-acid--CoA ligase 1537 52.16 +1 1692019..1692873 - 284 147674280 - VC0395_A1571 - hypothetical protein 1538 50.57 0 1692870..1693478 - 202 147674501 - VC0395_A1572 - putative outer membrane lipoprotein Slp 1539 52.29 +1 1693444..1693749 - 101 147675166 - VC0395_A1573 - hypothetical protein 1540 53.64 +1 1693809..1694522 - 237 147673304 - VC0395_A1574 - hypothetical protein 1541 51.83 +1 1694519..1696459 - 646 147673986 - VC0395_A1575 - putative ATP-dependent helicase 1542 51.11 0 1696551..1696685 - 44 147675229 - VC0395_A1576 - hypothetical protein 1543 46.28 0 1697024..1697857 + 277 147673084 purU VC0395_A1577 - formyltetrahydrofolate deformylase 1544 51.44 0 1697931..1699985 - 684 147675393 fadH VC0395_A1578 - 2,4-dienoyl-CoA reductase 1545 48.84 0 1700161..1702011 + 616 147673256 sppA VC0395_A1579 - protease IV 1546 49.51 0 1702128..1703141 + 337 147674874 ansA VC0395_A1580 - cytoplasmic asparaginase I 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.