version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1407 46.59 0 1540378..1541757 - 459 147673703 cysS VC0395_A1439 - cysteinyl-tRNA synthetase 1408 46.06 0 1541903..1542397 + 164 147675691 ppiB VC0395_A1440 - peptidyl-prolyl cis-trans isomerase B 1409 43.32 -1 1542438..1543178 + 246 147674910 - VC0395_A1441 - UDP-2,3-diacylglucosamine hydrolase 1410 43.62 -1 1543274..1544488 + 404 147675144 - VC0395_A1442 - hypothetical protein 1411 43.42 -1 1544550..1545005 + 151 147674744 - VC0395_A1443 - hypothetical protein 1412 37.04 -2 1545037..1545711 - 224 147673972 - VC0395_A1444 - hypothetical protein 1413 41.92 -1 1545830..1546936 - 368 147675262 ompT VC0395_A1445 - ompT protein 1414 46.64 0 1547337..1549448 + 703 147673160 dinG VC0395_A1446 - ATP-dependent DNA helicase DinG 1415 50.00 0 1549486..1550265 + 259 147673887 - VC0395_A1447 - hypothetical protein 1416 46.81 0 1550250..1550813 + 187 147674739 priC VC0395_A1448 - primosomal replication protein N`` 1417 47.89 0 1550814..1551026 + 70 147675268 - VC0395_A1449 - hypothetical protein 1418 47.76 0 1551050..1553170 - 706 147673173 - VC0395_A1450 - methyl-accepting chemotaxis protein 1419 46.10 0 1553368..1554174 + 268 147674047 xth VC0395_A1451 - exonuclease III 1420 46.61 0 1554233..1554910 - 225 147674940 - VC0395_A1452 - amino acid ABC transporter, permease protein 1421 48.40 0 1554913..1555695 - 260 147674527 - VC0395_A1453 - amino acid ABC transporter, permease protein 1422 46.62 0 1555801..1556583 - 260 147673397 - VC0395_A1454 - amino acid ABC transporter, periplasmic amino acid-binding protein 1423 47.08 0 1556762..1557532 - 256 147674682 - VC0395_A1455 - amino acid ABC transporter, ATP-binding protein 1424 49.94 0 1558237..1559790 + 517 147674888 - VC0395_A1456 - hypothetical protein 1425 47.93 0 1559969..1562332 + 787 147673272 pflB VC0395_A1457 - formate acetyltransferase 1426 48.01 0 1562468..1563496 + 342 147673190 - VC0395_A1458 - hypothetical protein 1427 47.16 0 1563514..1565394 - 626 147673779 - VC0395_A1459 - methyl-accepting chemotaxis protein 1428 46.15 0 1565727..1566467 + 246 147674120 pflA VC0395_A1460 - pyruvate formate lyase-activating enzyme 1 1429 46.91 0 1566533..1567195 + 220 147675077 - VC0395_A1461 - hypothetical protein 1430 47.37 0 1567304..1567816 + 170 147675296 - VC0395_A1462 - hypothetical protein 1431 47.08 0 1568057..1569991 + 644 147673471 - VC0395_A1463 - hypothetical protein 1432 47.64 0 1570136..1571407 + 423 147673749 - VC0395_A1464 - hypothetical protein 1433 46.81 0 1571420..1572970 + 516 147675162 - VC0395_A1465 - hypothetical protein 1434 52.57 +1 1573055..1573813 - 252 147673188 kdsB VC0395_A1466 - 3-deoxy-manno-octulosonate cytidylyltransferase 1435 48.33 0 1573813..1573992 - 59 147673931 - VC0395_A1467 - hypothetical protein 1436 51.24 0 1573973..1574983 - 336 147674626 lpxK VC0395_A1468 - tetraacyldisaccharide 4'-kinase 1437 49.17 0 1574983..1576731 - 582 147675578 msbA VC0395_A1469 - lipid transporter ATP-binding/permease protein 1438 49.40 0 1576762..1579020 - 752 147673615 - VC0395_A1470 - ComEC/rec2 family protein 1439 50.09 0 1579014..1579544 + 176 147674248 - VC0395_A1471 - hypothetical protein 1440 51.08 0 1579659..1580903 - 414 147674975 - VC0395_A1472 - outer membrane-specific lipoprotein transporter subunit LolE 1441 49.78 0 1580904..1581590 - 228 147675470 - VC0395_A1473 - ABC transporter, ATP-binding protein 1442 51.60 0 1581583..1582803 - 406 147675143 - VC0395_A1474 - hypothetical protein 1443 48.61 0 1582967..1583542 + 191 147674654 - VC0395_A1475 - hypothetical protein 1444 51.01 0 1583545..1587012 + 1155 147674778 mfd VC0395_A1476 - transcription-repair coupling factor 1445 48.31 0 1587152..1587952 + 266 147675587 - VC0395_A1477 - hypothetical protein 1446 47.74 0 1588287..1590362 + 691 147675607 - VC0395_A1478 - hypothetical protein 1447 46.37 0 1590647..1591183 + 178 147673417 - VC0395_A1479 - putative ribosomal-protein-serine acetyltransferase 1448 48.89 0 1591296..1592600 - 434 147674696 ndh VC0395_A1480 - NADH dehydrogenase 1449 39.72 -2 1592686..1592826 + 46 147675275 - VC0395_A1481 - hypothetical protein 1450 43.52 -1 1592943..1593482 - 179 147673914 - VC0395_A1482 - hypothetical protein 1451 49.25 0 1593662..1594522 - 286 147673327 - VC0395_A1483 - hypothetical protein 1452 45.35 0 1594550..1595140 - 196 147673411 - VC0395_A1484 - putative lipoprotein 1453 46.15 0 1595193..1595582 - 129 147673225 - VC0395_A1485 - putative lipoprotein 1454 48.13 0 1595582..1597000 - 472 147674989 - VC0395_A1486 - hypothetical protein 1455 47.86 0 1597013..1597363 - 116 147674459 - VC0395_A1487 - histidine triad family protein 1456 48.59 0 1597596..1599614 + 672 147674132 - VC0395_A1488 - methyl-accepting chemotaxis protein 1457 48.26 0 1599784..1600935 + 383 147673346 - VC0395_A1489 - hypothetical protein 1458 44.88 0 1601170..1602009 - 279 147675341 fadR VC0395_A1490 - fatty acid metabolism regulator 1459 46.96 0 1602654..1604246 + 530 147674405 nhaB VC0395_A1491 - sodium/proton antiporter 1460 48.85 0 1604326..1604847 + 173 147674425 dsbB VC0395_A1492 - disulfide bond formation protein B 1461 49.15 0 1604923..1607805 - 960 147673704 - VC0395_A1493 - putative cell division protein FtsK 1462 42.83 -1 1607983..1608477 - 164 147675687 lrp VC0395_A1494 - leucine-responsive transcriptional regulator 1463 48.18 0 1608634..1609758 + 374 147673741 ald VC0395_A1495 - alanine dehydrogenase 1464 48.20 0 1609800..1610996 - 398 147674493 - VC0395_A1496 - hypothetical protein 1465 46.46 0 1611058..1612032 - 324 147674603 cysB VC0395_A1497 - transcriptional regulator CysB 1466 42.67 -1 1612118..1612267 - 49 147675397 - VC0395_A1498 - hypothetical protein 1467 41.44 -1 1612297..1613085 + 262 147675621 - VC0395_A1499 - hypothetical protein 1468 43.24 -1 1613147..1613923 + 258 147673611 miaE VC0395_A1500 - tRNA-(MS[2]IO[6]A)-hydroxylase 1469 48.56 0 1613981..1614676 - 231 147674982 pyrF VC0395_A1501 - orotidine 5'-phosphate decarboxylase 1470 45.47 0 1614749..1615918 - 389 147675765 - VC0395_A1502 - hypothetical protein 1471 41.49 -1 1615930..1616211 - 93 147673081 - VC0395_A1503 - hypothetical protein 1472 47.67 0 1616350..1616628 - 92 147673848 ihfB VC0395_A1504 - integration host factor subunit beta 1473 46.44 0 1616916..1618586 - 556 147673739 rpsA VC0395_A1505 - 30S ribosomal protein S1 1474 49.13 0 1618695..1619384 - 229 147673554 cmk VC0395_A1506 - cytidylate kinase 1475 46.79 0 1619555..1619866 - 103 147675214 - VC0395_A1507 - hypothetical protein 1476 46.02 0 1620001..1621860 - 619 147674490 ppiD VC0395_A1508 - peptidyl-prolyl cis-trans isomerase D 1477 48.72 0 1622013..1622285 - 90 147673385 hupB VC0395_A1509 - DNA-binding protein HU-beta 1478 48.88 0 1622469..1624829 - 786 147673301 lon VC0395_A1510 - ATP-dependent protease LA 1479 47.54 0 1624952..1626232 - 426 147674941 clpX VC0395_A1511 - ATP-dependent protease ATP-binding subunit 1480 46.43 0 1626312..1626914 - 200 147674197 clpP VC0395_A1512 - ATP-dependent Clp protease proteolytic subunit 1481 47.93 0 1627044..1628345 - 433 147673079 tig VC0395_A1513 - trigger factor 1482 39.73 -2 1628636..1628854 - 72 147675226 - VC0395_A1514 - hypothetical protein 1483 49.50 0 1628844..1630637 + 597 147675602 dctB VC0395_A1515 - C4-dicarboxylate transport sensor protein 1484 49.81 0 1630640..1631980 + 446 147673614 dctD-1 VC0395_A1516 - C4-dicarboxylate transport transcriptional regulatory protein 1485 50.37 0 1632105..1633466 - 453 147674787 dctM VC0395_A1517 - C4-dicarboxylate transport protein 1486 47.50 0 1633470..1634168 - 232 147675606 - VC0395_A1518 - putative C4-dicarboxylate transport protein DctQ 1487 48.55 0 1634200..1635198 - 332 147675592 dctP-2 VC0395_A1519 - C4-dicarboxylate-binding periplasmic protein 1488 50.43 0 1635430..1636956 - 508 147674783 - VC0395_A1520 - hypothetical protein 1489 41.52 -1 1637127..1637297 - 56 147675191 - VC0395_A1521 - hypothetical protein 1490 43.31 -1 1637459..1637929 + 156 147673221 - VC0395_A1522 - hypothetical protein 1491 43.24 -1 1637893..1639860 + 655 147673575 - VC0395_A1523 - GGDEF family protein 1492 50.33 0 1639939..1640697 + 252 147674331 - VC0395_A1524 - hypothetical protein 1493 45.45 0 1640700..1641623 + 307 147673088 - VC0395_A1525 - putative phosphatidate cytidylyltransferase 1494 46.43 0 1641631..1642302 + 223 147673855 - VC0395_A1526 - hypothetical protein 1495 46.00 0 1642392..1642841 + 149 147674814 - VC0395_A1527 - hypothetical protein 1496 47.50 0 1643135..1643755 + 206 147675617 - VC0395_A1528 - hypothetical protein 1497 47.96 0 1643802..1644464 - 220 147673644 - VC0395_A1529 - hypothetical protein 1498 46.99 0 1644777..1646072 - 431 147674426 - VC0395_A1530 - hypothetical protein 1499 49.79 0 1646627..1647562 + 311 147673213 folD VC0395_A1533 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 1500 47.80 0 1647845..1648708 + 287 147673976 pvcB VC0395_A1534 - PvcB protein 1501 48.63 0 1648693..1650156 + 487 147674769 - VC0395_A1535 - hypothetical protein 1502 43.12 -1 1650277..1651206 - 309 147675040 - VC0395_A1536 - LysR family transcriptional regulator 1503 44.44 0 1651526..1653352 + 608 147675647 pvcA VC0395_A1537 - pvcA protein 1504 52.33 +1 1653442..1655889 - 815 147673939 bisZ VC0395_A1538 - biotin sulfoxide reductase 1505 49.86 0 1655912..1657018 - 368 147673410 yecK VC0395_A1539 - cytochrome c-type protein YecK 1506 50.41 0 1657273..1659813 - 846 147675561 chiA-1 VC0395_A1540 - chitinase 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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