version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1366 38.33 -2 1500227..1500346 - 39 147674870 - VC0395_A1398 - hypothetical protein 1367 38.82 -2 1500889..1501125 - 78 147675467 - VC0395_A1399 - hypothetical protein 1368 40.48 -1 1501215..1501676 + 153 147674002 - VC0395_A1400 - hypothetical protein 1369 48.25 0 1501903..1502217 + 104 147674565 - VC0395_A1401 - hypothetical protein 1370 45.19 0 1502268..1502714 + 148 147674562 - VC0395_A1402 - hypothetical protein 1371 43.36 -1 1502821..1503807 + 328 147673899 - VC0395_A1403 - hypothetical protein 1372 33.79 -2 1503842..1504060 - 72 147673297 - VC0395_A1404 - hypothetical protein 1373 29.08 -2 1504774..1505619 + 281 147675391 - VC0395_A1405 - hypothetical protein 1374 47.19 0 1505734..1505964 - 76 147675012 - VC0395_A1406 - putative transcriptional regulator 1375 43.63 -1 1506564..1506767 + 67 147675248 - VC0395_A1408 - hypothetical protein 1376 47.05 0 1506759..1507232 - 157 147673789 - VC0395_A1407 - hypothetical protein 1377 45.95 0 1507356..1507775 - 139 147674287 - VC0395_A1409 - hypothetical protein 1378 50.58 0 1507892..1509277 + 461 147674040 cry1 VC0395_A1410 - RNA-binding cryptochrome Cry1 1379 52.82 +1 1509274..1509981 + 235 147673078 - VC0395_A1411 - C factor cell-cell signaling protein 1380 45.37 0 1509992..1510207 - 71 147675532 - VC0395_A1412 - hypothetical protein 1381 50.40 0 1510304..1512067 - 587 147674581 - VC0395_A1413 - sigma-54 dependent transcriptional regulator 1382 49.51 0 1512348..1513868 + 506 147674305 aldA-2 VC0395_A1414 - aldehyde dehydrogenase 1383 37.41 -2 1514201..1514641 + 146 147674475 frvA VC0395_A1415 - PTS system, fructose-specific IIA component 1384 49.79 0 1514653..1516056 + 467 147675511 frwBC VC0395_A1416 - PTS system, fructose-specific IIBC component 1385 49.52 0 1516131..1517996 - 621 147673546 frwABC VC0395_A1417 - PTS system, fructose-specific IIABC component 1386 49.33 0 1518213..1518512 + 99 147675767 frwB VC0395_A1418 - PTS system, fructose-specific IIB component 1387 47.69 0 1518521..1519300 + 259 147674198 - VC0395_A1420 - putative PTS system, nitrogen regulatory IIA component 1388 42.74 -1 1519292..1520131 - 279 147673124 - VC0395_A1419 - transcriptional regulator 1389 50.37 0 1520503..1522404 + 633 147674929 fruA-1 VC0395_A1421 - PTS system, fructose-specific IIABC component 1390 46.10 0 1522520..1523686 + 388 147674804 manA-2 VC0395_A1422 - mannose-6-phosphate isomerase 1391 46.58 0 1523806..1524258 - 150 147675599 - VC0395_A1423 - hypothetical protein 1392 45.05 0 1524594..1526804 - 736 147674034 - VC0395_A1424 - sensor histidine kinase 1393 45.03 0 1527012..1527584 + 190 147674857 - VC0395_A1425 - hypothetical protein 1394 46.70 0 1527658..1528719 - 353 147674242 nadA VC0395_A1426 - quinolinate synthetase 1395 46.80 0 1528893..1529657 - 254 147673656 - VC0395_A1427 - hypothetical protein 1396 47.40 0 1529673..1530191 - 172 147673661 pal VC0395_A1428 - peptidoglycan-associated lipoprotein 1397 45.38 0 1530223..1531575 - 450 147674437 tolB VC0395_A1429 - translocation protein TolB 1398 47.15 0 1531590..1532660 - 356 147673834 tolA VC0395_A1430 - tolA protein 1399 43.08 -1 1532678..1533118 - 146 147673277 tolR VC0395_A1431 - tolR membrane protein 1400 46.20 0 1533121..1533804 - 227 147674417 tolQ VC0395_A1432 - tolQ protein 1401 41.03 -1 1533937..1534092 - 51 147673897 - VC0395_A1433 - short chain acyl-CoA thioesterase YbgC 1402 47.05 0 1534799..1535935 - 378 147673360 cydB-1 VC0395_A1434 - cytochrome d ubiquinol oxidase, subunit II 1403 47.05 0 1535953..1537578 - 541 147674052 cydA-1 VC0395_A1435 - cytochrome d ubiquinol oxidase, subunit I 1404 47.06 0 1537998..1539002 - 334 147673267 ruvB VC0395_A1436 - Holliday junction DNA helicase B 1405 48.29 0 1539058..1539672 - 204 147675231 ruvA VC0395_A1437 - Holliday junction DNA helicase motor protein 1406 49.62 0 1539769..1540290 - 173 147673791 ruvC VC0395_A1438 - Holliday junction resolvase 1407 46.59 0 1540378..1541757 - 459 147673703 cysS VC0395_A1439 - cysteinyl-tRNA synthetase 1408 46.06 0 1541903..1542397 + 164 147675691 ppiB VC0395_A1440 - peptidyl-prolyl cis-trans isomerase B 1409 43.32 -1 1542438..1543178 + 246 147674910 - VC0395_A1441 - UDP-2,3-diacylglucosamine hydrolase 1410 43.62 -1 1543274..1544488 + 404 147675144 - VC0395_A1442 - hypothetical protein 1411 43.42 -1 1544550..1545005 + 151 147674744 - VC0395_A1443 - hypothetical protein 1412 37.04 -2 1545037..1545711 - 224 147673972 - VC0395_A1444 - hypothetical protein 1413 41.92 -1 1545830..1546936 - 368 147675262 ompT VC0395_A1445 - ompT protein 1414 46.64 0 1547337..1549448 + 703 147673160 dinG VC0395_A1446 - ATP-dependent DNA helicase DinG 1415 50.00 0 1549486..1550265 + 259 147673887 - VC0395_A1447 - hypothetical protein 1416 46.81 0 1550250..1550813 + 187 147674739 priC VC0395_A1448 - primosomal replication protein N`` 1417 47.89 0 1550814..1551026 + 70 147675268 - VC0395_A1449 - hypothetical protein 1418 47.76 0 1551050..1553170 - 706 147673173 - VC0395_A1450 - methyl-accepting chemotaxis protein 1419 46.10 0 1553368..1554174 + 268 147674047 xth VC0395_A1451 - exonuclease III 1420 46.61 0 1554233..1554910 - 225 147674940 - VC0395_A1452 - amino acid ABC transporter, permease protein 1421 48.40 0 1554913..1555695 - 260 147674527 - VC0395_A1453 - amino acid ABC transporter, permease protein 1422 46.62 0 1555801..1556583 - 260 147673397 - VC0395_A1454 - amino acid ABC transporter, periplasmic amino acid-binding protein 1423 47.08 0 1556762..1557532 - 256 147674682 - VC0395_A1455 - amino acid ABC transporter, ATP-binding protein 1424 49.94 0 1558237..1559790 + 517 147674888 - VC0395_A1456 - hypothetical protein 1425 47.93 0 1559969..1562332 + 787 147673272 pflB VC0395_A1457 - formate acetyltransferase 1426 48.01 0 1562468..1563496 + 342 147673190 - VC0395_A1458 - hypothetical protein 1427 47.16 0 1563514..1565394 - 626 147673779 - VC0395_A1459 - methyl-accepting chemotaxis protein 1428 46.15 0 1565727..1566467 + 246 147674120 pflA VC0395_A1460 - pyruvate formate lyase-activating enzyme 1 1429 46.91 0 1566533..1567195 + 220 147675077 - VC0395_A1461 - hypothetical protein 1430 47.37 0 1567304..1567816 + 170 147675296 - VC0395_A1462 - hypothetical protein 1431 47.08 0 1568057..1569991 + 644 147673471 - VC0395_A1463 - hypothetical protein 1432 47.64 0 1570136..1571407 + 423 147673749 - VC0395_A1464 - hypothetical protein 1433 46.81 0 1571420..1572970 + 516 147675162 - VC0395_A1465 - hypothetical protein 1434 52.57 +1 1573055..1573813 - 252 147673188 kdsB VC0395_A1466 - 3-deoxy-manno-octulosonate cytidylyltransferase 1435 48.33 0 1573813..1573992 - 59 147673931 - VC0395_A1467 - hypothetical protein 1436 51.24 0 1573973..1574983 - 336 147674626 lpxK VC0395_A1468 - tetraacyldisaccharide 4'-kinase 1437 49.17 0 1574983..1576731 - 582 147675578 msbA VC0395_A1469 - lipid transporter ATP-binding/permease protein 1438 49.40 0 1576762..1579020 - 752 147673615 - VC0395_A1470 - ComEC/rec2 family protein 1439 50.09 0 1579014..1579544 + 176 147674248 - VC0395_A1471 - hypothetical protein 1440 51.08 0 1579659..1580903 - 414 147674975 - VC0395_A1472 - outer membrane-specific lipoprotein transporter subunit LolE 1441 49.78 0 1580904..1581590 - 228 147675470 - VC0395_A1473 - ABC transporter, ATP-binding protein 1442 51.60 0 1581583..1582803 - 406 147675143 - VC0395_A1474 - hypothetical protein 1443 48.61 0 1582967..1583542 + 191 147674654 - VC0395_A1475 - hypothetical protein 1444 51.01 0 1583545..1587012 + 1155 147674778 mfd VC0395_A1476 - transcription-repair coupling factor 1445 48.31 0 1587152..1587952 + 266 147675587 - VC0395_A1477 - hypothetical protein 1446 47.74 0 1588287..1590362 + 691 147675607 - VC0395_A1478 - hypothetical protein 1447 46.37 0 1590647..1591183 + 178 147673417 - VC0395_A1479 - putative ribosomal-protein-serine acetyltransferase 1448 48.89 0 1591296..1592600 - 434 147674696 ndh VC0395_A1480 - NADH dehydrogenase 1449 39.72 -2 1592686..1592826 + 46 147675275 - VC0395_A1481 - hypothetical protein 1450 43.52 -1 1592943..1593482 - 179 147673914 - VC0395_A1482 - hypothetical protein 1451 49.25 0 1593662..1594522 - 286 147673327 - VC0395_A1483 - hypothetical protein 1452 45.35 0 1594550..1595140 - 196 147673411 - VC0395_A1484 - putative lipoprotein 1453 46.15 0 1595193..1595582 - 129 147673225 - VC0395_A1485 - putative lipoprotein 1454 48.13 0 1595582..1597000 - 472 147674989 - VC0395_A1486 - hypothetical protein 1455 47.86 0 1597013..1597363 - 116 147674459 - VC0395_A1487 - histidine triad family protein 1456 48.59 0 1597596..1599614 + 672 147674132 - VC0395_A1488 - methyl-accepting chemotaxis protein 1457 48.26 0 1599784..1600935 + 383 147673346 - VC0395_A1489 - hypothetical protein 1458 44.88 0 1601170..1602009 - 279 147675341 fadR VC0395_A1490 - fatty acid metabolism regulator 1459 46.96 0 1602654..1604246 + 530 147674405 nhaB VC0395_A1491 - sodium/proton antiporter 1460 48.85 0 1604326..1604847 + 173 147674425 dsbB VC0395_A1492 - disulfide bond formation protein B 1461 49.15 0 1604923..1607805 - 960 147673704 - VC0395_A1493 - putative cell division protein FtsK 1462 42.83 -1 1607983..1608477 - 164 147675687 lrp VC0395_A1494 - leucine-responsive transcriptional regulator 1463 48.18 0 1608634..1609758 + 374 147673741 ald VC0395_A1495 - alanine dehydrogenase 1464 48.20 0 1609800..1610996 - 398 147674493 - VC0395_A1496 - hypothetical protein 1465 46.46 0 1611058..1612032 - 324 147674603 cysB VC0395_A1497 - transcriptional regulator CysB 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.