version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1280 49.49 0 1392041..1392727 - 228 147674536 - VC0395_A1311 - hypothetical protein 1281 48.00 0 1392951..1395719 + 922 147675340 - VC0395_A1312 - zinc protease 1282 47.78 0 1395853..1398309 - 818 147675480 - VC0395_A1313 - hypothetical protein 1283 51.65 0 1398589..1400958 + 789 147674763 - VC0395_A1314 - hypothetical protein 1284 48.29 0 1401074..1401688 - 204 147673222 - VC0395_A1315 - hypothetical protein 1285 45.65 0 1401876..1402208 + 110 147673992 - VC0395_A1316 - AsnC family transcriptional regulator 1286 51.97 +1 1402290..1406765 - 1491 147674404 mukB VC0395_A1317 - cell division protein MukB 1287 52.16 +1 1406762..1407457 - 231 147675372 mukE VC0395_A1318 - condesin subunit E 1288 50.45 0 1407465..1408802 - 445 147675329 mukF VC0395_A1319 - condesin subunit F 1289 47.77 0 1408814..1409596 - 260 147674195 smtA VC0395_A1320 - putative metallothionein SmtA 1290 49.47 0 1409686..1410534 + 282 147675084 - VC0395_A1321 - hypothetical protein 1291 47.94 0 1410635..1411339 - 234 147675661 torR VC0395_A1322 - DNA-binding transcriptional regulator TorR 1292 46.46 0 1411564..1412226 + 220 147674388 torD VC0395_A1323 - chaperone protein TorD 1293 48.27 0 1412633..1413643 + 336 147673764 - VC0395_A1324 - LacI family transcription regulator 1294 44.90 0 1414002..1414589 + 195 147675500 - VC0395_A1325 - hypothetical protein 1295 47.25 0 1414944..1415633 + 229 147674835 - VC0395_A1326 - hypothetical protein 1296 54.49 +1 1415667..1415978 + 103 147675056 - VC0395_A1327 - hypothetical protein 1297 47.50 0 1415983..1416801 - 272 147674093 - VC0395_A1328 - putative beta-ketoadipate enol-lactone hydrolase 1298 48.80 0 1416989..1418443 - 484 147673151 glgA VC0395_A1329 - glycogen synthase 1299 46.47 0 1418445..1419662 - 405 147675674 glgC VC0395_A1330 - glucose-1-phosphate adenylyltransferase 1300 37.78 -2 1419794..1419928 + 44 147673658 - VC0395_A1331 - hypothetical protein 1301 50.36 0 1420330..1422960 - 876 147675774 topA VC0395_A1332 - DNA topoisomerase I 1302 37.75 -2 1423298..1423546 + 82 147674634 - VC0395_A1333 - hypothetical protein 1303 50.51 0 1423637..1424917 - 426 147673856 aroA VC0395_A1334 - 3-phosphoshikimate 1-carboxyvinyltransferase 1304 43.63 -1 1424921..1425124 + 67 147675255 - VC0395_A1335 - hypothetical protein 1305 50.55 0 1425184..1425915 + 243 147674281 aat VC0395_A1336 - leucyl/phenylalanyl-tRNA--protein transferase 1306 46.58 0 1425919..1426620 + 233 147674038 - VC0395_A1337 - arginyl-tRNA-protein transferase 1307 43.84 -1 1426704..1426922 + 72 147673089 infA VC0395_A1338 - translation initiation factor IF-1 1308 50.56 0 1427226..1428125 - 299 147675536 - VC0395_A1339 - trans-2-enoyl-CoA reductase 1309 51.73 +1 1428630..1430912 - 760 147674587 - VC0395_A1340 - acyl-CoA dehydrogenase 1310 47.70 0 1430968..1431642 - 224 147674301 - VC0395_A1341 - TetR family transcriptional regulator 1311 42.03 -1 1431897..1432034 + 45 147673725 - VC0395_A1342 - hypothetical protein 1312 49.32 0 1432013..1433038 + 341 147674529 - VC0395_A1343 - hypothetical protein 1313 48.58 0 1433083..1433364 + 93 147674714 - VC0395_A1345 - hypothetical protein 1314 50.24 0 1433345..1434811 - 488 147674887 gabD VC0395_A1344 - succinate-semialdehyde dehydrogenase 1315 47.78 0 1434829..1435458 - 209 147675365 - VC0395_A1346 - TetR family transcriptional regulator 1316 46.91 0 1435685..1436509 + 274 147673235 - VC0395_A1347 - hypothetical protein 1317 45.23 0 1436409..1437635 + 408 147673829 - VC0395_A1348 - hypothetical protein 1318 44.12 0 1437646..1438767 + 373 147674444 - VC0395_A1349 - hypothetical protein 1319 45.39 0 1438783..1439661 - 292 147675699 - VC0395_A1350 - hypothetical protein 1320 45.21 0 1440714..1442018 + 434 147675036 pqiA VC0395_A1351 - paraquat-inducible protein A 1321 45.80 0 1442015..1443658 + 547 147675648 pqiB VC0395_A1352 - paraquat-inducible protein B 1322 48.70 0 1443655..1444233 + 192 147673513 - VC0395_A1353 - putative lipoprotein 1323 51.05 0 1444449..1445543 + 364 147675452 - VC0395_A1354 - HlyD family secretion protein 1324 52.97 +1 1445543..1448593 + 1016 147673314 - VC0395_A1355 - AcrB/AcrD/AcrF family transporter 1325 44.09 0 1449205..1450440 + 411 147675094 - VC0395_A1357 - phage family integrase 1326 46.96 0 1450515..1450991 + 158 147675635 - VC0395_A1358 - integrase, truncation 1327 40.92 -1 1451122..1454562 - 1146 147675032 - VC0395_A1359 - hypothetical protein 1328 40.56 -1 1454553..1456004 - 483 147674089 - VC0395_A1360 - hypothetical protein 1329 40.14 -1 1456001..1456735 - 244 147673520 - VC0395_A1361 - hypothetical protein 1330 41.35 -1 1456728..1458848 - 706 147675323 - VC0395_A1362 - hypothetical protein 1331 43.34 -1 1458893..1461961 - 1022 147674712 - VC0395_A1363 - putative type I restriction enzyme HsdR 1332 43.22 -1 1461989..1463980 - 663 147675278 - VC0395_A1364 - hypothetical protein 1333 44.94 0 1463973..1465385 - 470 147675030 - VC0395_A1365 - hypothetical protein 1334 40.68 -1 1465386..1466774 - 462 147674628 - VC0395_A1366 - hypothetical protein 1335 43.87 -1 1466731..1469112 - 793 147674983 - VC0395_A1367 - putative DNA methylase HsdM 1336 41.67 -1 1469253..1471316 - 687 147674006 - VC0395_A1368 - hypothetical protein 1337 41.82 -1 1471298..1474960 - 1220 147673329 - VC0395_A1369 - hypothetical protein 1338 44.83 0 1474988..1475848 + 286 147675105 - VC0395_A1370 - hypothetical protein 1339 36.13 -2 1475913..1476983 - 356 147674523 - VC0395_A1371 - hypothetical protein 1340 41.65 -1 1476998..1478152 - 384 147673747 - VC0395_A1372 - hypothetical protein 1341 43.61 -1 1478334..1479170 - 278 147675662 - VC0395_A1373 - hypothetical protein 1342 43.14 -1 1479299..1480195 - 298 147675305 - VC0395_A1374 - dihydrodipicolinate synthetase family protein 1343 45.33 0 1480233..1481516 - 427 147675054 - VC0395_A1375 - hypothetical protein 1344 41.19 -1 1481524..1482045 - 173 147675211 - VC0395_A1376 - hypothetical protein 1345 44.62 0 1482096..1483061 - 321 147673037 dctP-1 VC0395_A1377 - C4-dicarboxylate-binding periplasmic protein 1346 47.03 0 1483276..1483998 + 240 147674046 - VC0395_A1378 - N-acetylmannosamine-6-phosphate 2-epimerase 1347 45.02 0 1483986..1484849 + 287 147674472 - VC0395_A1379 - N-acetylmannosamine kinase 1348 44.94 0 1484853..1485989 + 378 147674908 nagA-2 VC0395_A1380 - N-acetylglucosamine-6-phosphate deacetylase 1349 45.17 0 1486334..1488757 + 807 147673281 nanH VC0395_A1381 - neuraminidase 1350 44.44 0 1488904..1489110 - 68 147673587 - VC0395_A1382 - transcriptional regulator 1351 48.85 0 1489224..1489700 + 158 147674352 - VC0395_A1383 - putative DNA repair protein RadC 1352 46.97 0 1489703..1489834 + 43 147674468 - VC0395_A1384 - hypothetical protein 1353 43.10 -1 1489930..1490625 - 231 147673665 - VC0395_A1385 - hypothetical protein 1354 44.44 0 1490622..1491494 - 290 147675565 orfB VC0395_A1386 - transposase OrfAB, subunit B 1355 43.19 -1 1491491..1491835 - 114 147674768 orfA VC0395_A1387 - transposase OrfAB, subunit A 1356 44.00 0 1491842..1492882 - 346 147674028 - VC0395_A1388 - hypothetical protein 1357 42.78 -1 1493017..1493376 - 119 147673269 - VC0395_A1389 - hypothetical protein 1358 39.15 -2 1493425..1493802 - 125 147675221 - VC0395_A1390 - hypothetical protein 1359 37.82 -2 1493857..1494435 - 192 147674482 - VC0395_A1391 - hypothetical protein 1360 38.94 -2 1494454..1494774 - 106 147674980 - VC0395_A1392 - putative transcriptional regulator 1361 39.73 -2 1494761..1495135 - 124 147673865 - VC0395_A1393 - putative transcriptional regulator 1362 40.04 -2 1495945..1496406 - 153 147673501 - VC0395_A1394 - hypothetical protein 1363 44.68 0 1496409..1497518 - 369 147675755 - VC0395_A1395 - hypothetical protein 1364 47.61 0 1497490..1499247 - 585 147673618 - VC0395_A1396 - hypothetical protein 1365 44.24 0 1499254..1500225 - 323 147674180 - VC0395_A1397 - hypothetical protein 1366 38.33 -2 1500227..1500346 - 39 147674870 - VC0395_A1398 - hypothetical protein 1367 38.82 -2 1500889..1501125 - 78 147675467 - VC0395_A1399 - hypothetical protein 1368 40.48 -1 1501215..1501676 + 153 147674002 - VC0395_A1400 - hypothetical protein 1369 48.25 0 1501903..1502217 + 104 147674565 - VC0395_A1401 - hypothetical protein 1370 45.19 0 1502268..1502714 + 148 147674562 - VC0395_A1402 - hypothetical protein 1371 43.36 -1 1502821..1503807 + 328 147673899 - VC0395_A1403 - hypothetical protein 1372 33.79 -2 1503842..1504060 - 72 147673297 - VC0395_A1404 - hypothetical protein 1373 29.08 -2 1504774..1505619 + 281 147675391 - VC0395_A1405 - hypothetical protein 1374 47.19 0 1505734..1505964 - 76 147675012 - VC0395_A1406 - putative transcriptional regulator 1375 43.63 -1 1506564..1506767 + 67 147675248 - VC0395_A1408 - hypothetical protein 1376 47.05 0 1506759..1507232 - 157 147673789 - VC0395_A1407 - hypothetical protein 1377 45.95 0 1507356..1507775 - 139 147674287 - VC0395_A1409 - hypothetical protein 1378 50.58 0 1507892..1509277 + 461 147674040 cry1 VC0395_A1410 - RNA-binding cryptochrome Cry1 1379 52.82 +1 1509274..1509981 + 235 147673078 - VC0395_A1411 - C factor cell-cell signaling protein 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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