version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1234 47.54 0 1345337..1346434 + 365 147675256 - VC0395_A1265 - ABC-type multidrug transport system, permease component 1235 44.59 0 1346593..1346814 + 73 147673052 - VC0395_A1266 - hypothetical protein 1236 48.69 0 1346820..1347086 - 88 147673854 - VC0395_A1267 - hypothetical protein 1237 47.07 0 1347233..1347676 + 147 147674423 hslJ VC0395_A1268 - heat shock protein HslJ 1238 49.17 0 1347884..1349032 + 382 147675331 - VC0395_A1269 - hypothetical protein 1239 50.03 0 1349046..1350746 + 566 147673944 - VC0395_A1270 - putative ABC transporter, permease protein 1240 48.42 0 1350712..1351374 + 220 147674206 - VC0395_A1271 - putative ABC transporter, ATP-binding protein 1241 48.95 0 1351367..1351987 + 206 147674766 - VC0395_A1272 - hypothetical protein 1242 47.88 0 1352046..1352753 - 235 147675726 - VC0395_A1273 - pseudouridine synthase Rlu family protein 1243 47.22 0 1352861..1354207 - 448 147674860 - VC0395_A1274 - putative sodium-dependent transporter 1244 48.93 0 1354763..1356217 + 484 147675655 cls VC0395_A1275 - cardiolipin synthetase 1245 50.46 0 1356298..1357488 + 396 147673284 metC VC0395_A1276 - cystathionine beta-lyase 1246 48.28 0 1357575..1358156 - 193 147674071 tag VC0395_A1277 - DNA-3-methyladenine glycosidase I 1247 49.73 0 1358243..1361341 - 1032 147674680 - VC0395_A1278 - AcrB/AcrD/AcrF family transporter 1248 49.26 0 1361334..1362413 - 359 147675113 - VC0395_A1279 - HlyD family secretion protein 1249 50.78 0 1362415..1363446 - 343 147673434 - VC0395_A1280 - putative multidrug resistance protein 1250 52.56 +1 1363618..1364007 - 129 147673938 pspC VC0395_A1281 - phage shock protein C 1251 49.15 0 1364000..1364233 - 77 147675766 pspB VC0395_A1282 - phage shock protein B 1252 47.38 0 1364247..1364915 - 222 147673382 pspA VC0395_A1283 - phage shock protein A 1253 50.25 0 1365125..1366141 + 338 147674452 pspF VC0395_A1284 - psp operon transcriptional activator 1254 49.11 0 1366255..1367877 + 540 147674011 sapA VC0395_A1285 - peptide ABC transporter, periplasmic peptide-binding protein 1255 48.08 0 1367877..1368839 + 320 147673317 sapB VC0395_A1286 - peptide ABC transporter, permease protein 1256 48.54 0 1368826..1369713 + 295 147674762 sapC VC0395_A1287 - peptide ABC transporter, permease protein 1257 50.10 0 1369713..1370708 + 331 147674310 sapD VC0395_A1288 - peptide ABC transporter, ATP-binding protein 1258 49.56 0 1370705..1371493 + 262 147673574 sapF VC0395_A1289 - peptide ABC transporter, ATP-binding protein 1259 49.94 0 1371494..1372264 + 256 147675690 - VC0395_A1290 - hypothetical protein 1260 46.49 0 1372282..1372836 - 184 147674406 - VC0395_A1291 - hypothetical protein 1261 47.79 0 1372806..1373711 - 301 147673963 - VC0395_A1292 - putative manganese-dependent inorganic pyrophosphatase 1262 50.46 0 1373921..1375105 + 394 147673366 - VC0395_A1293 - hypothetical protein 1263 41.12 -1 1375169..1375900 + 243 147673958 - VC0395_A1294 - hypothetical protein 1264 50.83 0 1375904..1377640 - 578 147673686 - VC0395_A1295 - putative alpha-1,6-galactosidase 1265 51.28 0 1377839..1380301 - 820 147675496 torA VC0395_A1296 - trimethylamine-N-oxide reductase 1266 49.54 0 1380325..1381509 - 394 147674416 torC VC0395_A1297 - cytochrome c-type protein TorC 1267 45.21 0 1381556..1381774 - 72 147674351 torE VC0395_A1298 - trimethylamine N-oxide reductase system, TorE protein 1268 45.94 0 1382418..1383329 - 303 147673760 - VC0395_A1299 - putative formate transporter 1 1269 47.77 0 1383465..1383845 + 126 147673140 - VC0395_A1300 - hypothetical protein 1270 49.34 0 1383949..1384779 + 276 147675295 - VC0395_A1301 - hypothetical protein 1271 47.53 0 1384772..1385419 + 215 147674691 - VC0395_A1302 - hypothetical protein 1272 45.19 0 1385572..1385841 + 89 147673883 - VC0395_A1303 - hypothetical protein 1273 45.97 0 1386074..1386619 + 181 147674793 yciB VC0395_A1304 - intracellular septation protein A 1274 48.53 0 1386758..1387198 + 146 147675608 - VC0395_A1305 - hypothetical protein 1275 50.17 0 1387273..1387569 + 98 147673552 - VC0395_A1306 - YciI-like protein 1276 49.59 0 1387478..1387969 + 163 147674926 - VC0395_A1307 - hypothetical protein 1277 50.26 0 1388244..1390529 - 761 147675183 metE VC0395_A1308 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1278 51.85 +1 1390800..1391717 + 305 147673038 metR VC0395_A1309 - transcriptional activator MetR 1279 44.12 0 1391724..1391927 - 67 147673780 - VC0395_A1310 - hypothetical protein 1280 49.49 0 1392041..1392727 - 228 147674536 - VC0395_A1311 - hypothetical protein 1281 48.00 0 1392951..1395719 + 922 147675340 - VC0395_A1312 - zinc protease 1282 47.78 0 1395853..1398309 - 818 147675480 - VC0395_A1313 - hypothetical protein 1283 51.65 0 1398589..1400958 + 789 147674763 - VC0395_A1314 - hypothetical protein 1284 48.29 0 1401074..1401688 - 204 147673222 - VC0395_A1315 - hypothetical protein 1285 45.65 0 1401876..1402208 + 110 147673992 - VC0395_A1316 - AsnC family transcriptional regulator 1286 51.97 +1 1402290..1406765 - 1491 147674404 mukB VC0395_A1317 - cell division protein MukB 1287 52.16 +1 1406762..1407457 - 231 147675372 mukE VC0395_A1318 - condesin subunit E 1288 50.45 0 1407465..1408802 - 445 147675329 mukF VC0395_A1319 - condesin subunit F 1289 47.77 0 1408814..1409596 - 260 147674195 smtA VC0395_A1320 - putative metallothionein SmtA 1290 49.47 0 1409686..1410534 + 282 147675084 - VC0395_A1321 - hypothetical protein 1291 47.94 0 1410635..1411339 - 234 147675661 torR VC0395_A1322 - DNA-binding transcriptional regulator TorR 1292 46.46 0 1411564..1412226 + 220 147674388 torD VC0395_A1323 - chaperone protein TorD 1293 48.27 0 1412633..1413643 + 336 147673764 - VC0395_A1324 - LacI family transcription regulator 1294 44.90 0 1414002..1414589 + 195 147675500 - VC0395_A1325 - hypothetical protein 1295 47.25 0 1414944..1415633 + 229 147674835 - VC0395_A1326 - hypothetical protein 1296 54.49 +1 1415667..1415978 + 103 147675056 - VC0395_A1327 - hypothetical protein 1297 47.50 0 1415983..1416801 - 272 147674093 - VC0395_A1328 - putative beta-ketoadipate enol-lactone hydrolase 1298 48.80 0 1416989..1418443 - 484 147673151 glgA VC0395_A1329 - glycogen synthase 1299 46.47 0 1418445..1419662 - 405 147675674 glgC VC0395_A1330 - glucose-1-phosphate adenylyltransferase 1300 37.78 -2 1419794..1419928 + 44 147673658 - VC0395_A1331 - hypothetical protein 1301 50.36 0 1420330..1422960 - 876 147675774 topA VC0395_A1332 - DNA topoisomerase I 1302 37.75 -2 1423298..1423546 + 82 147674634 - VC0395_A1333 - hypothetical protein 1303 50.51 0 1423637..1424917 - 426 147673856 aroA VC0395_A1334 - 3-phosphoshikimate 1-carboxyvinyltransferase 1304 43.63 -1 1424921..1425124 + 67 147675255 - VC0395_A1335 - hypothetical protein 1305 50.55 0 1425184..1425915 + 243 147674281 aat VC0395_A1336 - leucyl/phenylalanyl-tRNA--protein transferase 1306 46.58 0 1425919..1426620 + 233 147674038 - VC0395_A1337 - arginyl-tRNA-protein transferase 1307 43.84 -1 1426704..1426922 + 72 147673089 infA VC0395_A1338 - translation initiation factor IF-1 1308 50.56 0 1427226..1428125 - 299 147675536 - VC0395_A1339 - trans-2-enoyl-CoA reductase 1309 51.73 +1 1428630..1430912 - 760 147674587 - VC0395_A1340 - acyl-CoA dehydrogenase 1310 47.70 0 1430968..1431642 - 224 147674301 - VC0395_A1341 - TetR family transcriptional regulator 1311 42.03 -1 1431897..1432034 + 45 147673725 - VC0395_A1342 - hypothetical protein 1312 49.32 0 1432013..1433038 + 341 147674529 - VC0395_A1343 - hypothetical protein 1313 48.58 0 1433083..1433364 + 93 147674714 - VC0395_A1345 - hypothetical protein 1314 50.24 0 1433345..1434811 - 488 147674887 gabD VC0395_A1344 - succinate-semialdehyde dehydrogenase 1315 47.78 0 1434829..1435458 - 209 147675365 - VC0395_A1346 - TetR family transcriptional regulator 1316 46.91 0 1435685..1436509 + 274 147673235 - VC0395_A1347 - hypothetical protein 1317 45.23 0 1436409..1437635 + 408 147673829 - VC0395_A1348 - hypothetical protein 1318 44.12 0 1437646..1438767 + 373 147674444 - VC0395_A1349 - hypothetical protein 1319 45.39 0 1438783..1439661 - 292 147675699 - VC0395_A1350 - hypothetical protein 1320 45.21 0 1440714..1442018 + 434 147675036 pqiA VC0395_A1351 - paraquat-inducible protein A 1321 45.80 0 1442015..1443658 + 547 147675648 pqiB VC0395_A1352 - paraquat-inducible protein B 1322 48.70 0 1443655..1444233 + 192 147673513 - VC0395_A1353 - putative lipoprotein 1323 51.05 0 1444449..1445543 + 364 147675452 - VC0395_A1354 - HlyD family secretion protein 1324 52.97 +1 1445543..1448593 + 1016 147673314 - VC0395_A1355 - AcrB/AcrD/AcrF family transporter 1325 44.09 0 1449205..1450440 + 411 147675094 - VC0395_A1357 - phage family integrase 1326 46.96 0 1450515..1450991 + 158 147675635 - VC0395_A1358 - integrase, truncation 1327 40.92 -1 1451122..1454562 - 1146 147675032 - VC0395_A1359 - hypothetical protein 1328 40.56 -1 1454553..1456004 - 483 147674089 - VC0395_A1360 - hypothetical protein 1329 40.14 -1 1456001..1456735 - 244 147673520 - VC0395_A1361 - hypothetical protein 1330 41.35 -1 1456728..1458848 - 706 147675323 - VC0395_A1362 - hypothetical protein 1331 43.34 -1 1458893..1461961 - 1022 147674712 - VC0395_A1363 - putative type I restriction enzyme HsdR 1332 43.22 -1 1461989..1463980 - 663 147675278 - VC0395_A1364 - hypothetical protein 1333 44.94 0 1463973..1465385 - 470 147675030 - VC0395_A1365 - hypothetical protein 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0