version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1084 47.80 0 1173237..1173713 - 158 147675310 - VC0395_A1112 - hypothetical protein 1085 48.06 0 1173863..1175050 + 395 147675263 aroH VC0395_A1114 - phospho-2-dehydro-3-deoxyheptonate aldolase 1086 47.00 0 1175062..1175544 + 160 147674648 - VC0395_A1115 - nucleotide-binding protein 1087 50.77 0 1175679..1176458 - 259 147673738 cobB VC0395_A1116 - NAD-dependent deacetylase 1088 47.99 0 1176556..1176978 - 140 147673164 - VC0395_A1117 - hypothetical protein 1089 49.53 0 1176965..1178038 - 357 147675698 fdnI VC0395_A1118 - formate dehydrogenase, cytochrome B556 subunit 1090 53.04 +1 1178039..1178647 - 202 147675071 fdhB VC0395_A1119 - formate dehydrogenase, iron-sulfur subunit 1091 51.33 0 1178659..1181514 - 951 147674130 - VC0395_A1120 - putative formate dehydrogenase, alpha subunit 1092 50.00 0 1181526..1181723 - 65 147673386 - VC0395_A1121 - hypothetical protein 1093 51.64 0 1181800..1182471 - 223 147674264 - VC0395_A1122 - putative chaperone, formate dehydrogenase-specific 1094 50.42 0 1182497..1184158 - 553 147673441 - VC0395_A1123 - iron-sulfur cluster-binding protein 1095 48.65 0 1184357..1185022 - 221 147673884 - VC0395_A1124 - hypothetical protein 1096 53.46 +1 1184949..1185425 - 158 147673044 - VC0395_A1125 - hypothetical protein 1097 48.92 0 1185470..1186483 + 337 147675414 fdhD VC0395_A1126 - formate dehydrogenase accessory protein 1098 48.78 0 1186590..1188182 - 530 147674653 - VC0395_A1127 - ABC transporter, ATP-binding protein 1099 47.64 0 1188394..1190427 - 677 147673472 - VC0395_A1128 - sensor histidine kinase 1100 50.79 0 1190417..1191871 - 484 147675634 - VC0395_A1129 - sigma-54 dependent response regulator 1101 46.62 0 1192163..1192990 + 275 147674726 - VC0395_A1130 - hypothetical protein 1102 51.65 0 1192997..1193695 + 232 147674121 - VC0395_A1131 - ABC transporter, permease protein 1103 48.96 0 1193704..1194426 + 240 147674476 - VC0395_A1132 - ABC transporter, ATP-binding protein 1104 48.69 0 1194380..1194991 + 203 147675242 mobA VC0395_A1133 - molybdopterin-guanine dinucleotide biosynthesis protein A 1105 50.30 0 1194988..1196808 + 606 147674408 moeA-1 VC0395_A1134 - molybdopterin biosynthesis MoeA protein 1106 39.90 -2 1196898..1197278 - 126 147675216 - VC0395_A1135 - hypothetical protein 1107 38.89 -2 1197688..1197849 - 53 147673565 - VC0395_A1136 - hypothetical protein 1108 42.39 -1 1197893..1198168 + 91 147674385 - VC0395_A1137 - hypothetical protein 1109 49.61 0 1198375..1199283 - 302 147674774 - VC0395_A1138 - N-acetyl-D-glucosamine kinase 1110 47.29 0 1199446..1200183 - 245 147673302 - VC0395_A1139 - hypothetical protein 1111 48.42 0 1200160..1201074 + 304 147673952 - VC0395_A1140 - hypothetical protein 1112 47.68 0 1201076..1203097 - 673 147674542 - VC0395_A1141 - methyl-accepting chemotaxis protein 1113 46.11 0 1203186..1203686 + 166 147673576 nlpC VC0395_A1142 - lipoprotein NlpC 1114 43.29 -1 1203696..1204127 - 143 147675224 - VC0395_A1143 - hypothetical protein 1115 44.87 0 1204556..1205422 + 288 147673857 - VC0395_A1144 - hypothetical protein 1116 44.61 0 1205580..1205783 + 67 147673093 - VC0395_A1145 - hypothetical protein 1117 48.99 0 1206026..1207411 + 461 147675290 - VC0395_A1146 - multidrug efflux protein 1118 47.87 0 1207615..1208598 + 327 147675575 - VC0395_A1147 - putative lipoprotein 1119 49.82 0 1208605..1209453 - 282 147674166 ligA-2 VC0395_A1148 - DNA ligase 1120 48.18 0 1209760..1210938 - 392 147673413 - VC0395_A1149 - hypothetical protein 1121 52.33 +1 1210935..1211555 - 206 147675420 tonB2 VC0395_A1150 - tonB2 protein 1122 50.37 0 1211555..1211959 - 134 147674469 exbD2 VC0395_A1151 - TonB system transport protein ExbD2 1123 49.36 0 1211956..1212498 - 180 147675745 exbB2 VC0395_A1152 - TonB system transport protein ExbB2 1124 51.02 0 1212505..1213878 - 457 147673075 - VC0395_A1153 - MotA/TolQ/ExbB proton channel family protein 1125 47.83 0 1213878..1214636 - 252 147673457 - VC0395_A1154 - hypothetical protein 1126 48.51 0 1214955..1216259 + 434 147674211 ugpB VC0395_A1155 - glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein 1127 50.57 0 1216335..1217216 + 293 147673846 ugpA VC0395_A1156 - glycerol-3-phosphate ABC transporter, permease protein 1128 46.86 0 1217226..1218068 + 280 147674616 ugpE VC0395_A1157 - glycerol-3-phosphate ABC transporter, permease protein 1129 49.96 0 1218121..1219239 + 372 147673046 ugpC VC0395_A1158 - glycerol-3-phosphate transporter ATP-binding subunit 1130 48.82 0 1219264..1220025 + 253 147673808 glpR VC0395_A1159 - glycerol-3-phosphate regulon repressor 1131 47.90 0 1220053..1220766 + 237 147674964 - VC0395_A1160 - putative glycerophosphoryl diester phosphodiesterase 1132 50.74 0 1220842..1221312 - 156 147675741 - VC0395_A1161 - hypothetical protein 1133 52.07 +1 1221323..1221685 - 120 147675253 - VC0395_A1162 - hypothetical protein 1134 43.94 -1 1221642..1221773 + 43 147674455 - VC0395_A1163 - hypothetical protein 1135 48.50 0 1221820..1222854 - 344 147675752 - VC0395_A1164 - LacI family transcription regulator 1136 47.25 0 1222890..1224326 - 478 147673845 bglA VC0395_A1165 - 6-phospho-beta-glucosidase 1137 51.08 0 1224739..1226913 + 724 147674207 perA VC0395_A1166 - catalase/peroxidase 1138 43.12 -1 1226978..1227907 - 309 147673422 - VC0395_A1167 - LysR family transcriptional regulator 1139 44.16 0 1227971..1229143 + 390 147674576 - VC0395_A1168 - metallo-beta-lactamase superfamily protein 1140 48.59 0 1229320..1230453 + 377 147674153 - VC0395_A1169 - membrane-fusion protein 1141 48.89 0 1230446..1231705 + 419 147673121 - VC0395_A1170 - putative outer membrane protein TolC 1142 50.70 0 1231705..1232919 + 404 147675384 - VC0395_A1171 - hypothetical protein 1143 50.08 0 1232923..1234200 + 425 147675463 - VC0395_A1172 - hypothetical protein 1144 50.00 0 1234200..1234901 + 233 147675008 - VC0395_A1173 - ABC transporter, ATP-binding protein 1145 50.86 0 1234975..1235967 - 330 147673606 qxtB VC0395_A1174 - quinol oxidase, subunit II 1146 50.75 0 1235964..1237301 - 445 147675651 qxtA VC0395_A1175 - quinol oxidase, subunit I 1147 44.62 0 1237824..1238204 + 126 147675203 - VC0395_A1176 - hypothetical protein 1148 52.09 +1 1238220..1239605 + 461 147674412 fumC VC0395_A1177 - fumarate hydratase 1149 44.27 0 1239736..1240119 - 127 147673036 - VC0395_A1178 - hypothetical protein 1150 45.97 0 1240164..1240622 - 152 147675386 - VC0395_A1179 - hypothetical protein 1151 45.22 0 1240625..1240969 - 114 147674593 - VC0395_A1180 - hypothetical protein 1152 46.84 0 1241125..1241946 - 273 147674196 - VC0395_A1181 - hypothetical protein 1153 45.84 0 1242119..1243789 - 556 147674686 - VC0395_A1182 - enterobactin synthetase component F-related protein 1154 48.57 0 1243853..1244764 - 303 147675267 - VC0395_A1183 - LysR family transcriptional regulator 1155 52.74 +1 1244844..1246394 + 516 147673508 - VC0395_A1184 - NADH dehydrogenase subunit L 1156 54.04 +1 1246319..1248907 + 862 147674092 - VC0395_A1185 - hypothetical protein 1157 50.78 0 1248952..1249467 - 171 147674669 sodC VC0395_A1186 - superoxide dismutase, Cu-Zn 1158 46.91 0 1249507..1250073 - 188 147675624 - VC0395_A1187 - ankyrin repeat-containing protein 1159 45.07 0 1250137..1251840 - 567 147673445 katB VC0395_A1188 - catalase 1160 40.14 -1 1252094..1252534 + 146 147674362 - VC0395_A1189 - hypothetical protein 1161 48.58 0 1252723..1253601 - 292 147674953 - VC0395_A1190 - LysR family transcriptional regulator 1162 48.47 0 1253710..1254495 + 261 147674500 aldC VC0395_A1191 - alpha-acetolactate decarboxylase 1163 51.82 +1 1254634..1256337 + 567 147673632 alsS VC0395_A1192 - acetolactate synthase 1164 52.17 +1 1256334..1257092 + 252 147673245 - VC0395_A1193 - short chain dehydrogenase/reductase family oxidoreductase 1165 45.73 0 1257330..1258184 + 284 147674015 - VC0395_A1194 - hypothetical protein 1166 42.79 -1 1258267..1259556 + 429 147675021 - VC0395_A1195 - GGDEF family protein 1167 51.38 0 1259574..1260626 - 350 147675555 galM VC0395_A1196 - aldose 1-epimerase 1168 51.97 +1 1260635..1261852 - 405 147673567 galK VC0395_A1197 - galactokinase 1169 49.33 0 1261861..1262979 - 372 147674295 galT VC0395_A1198 - galactose-1-phosphate uridylyltransferase 1170 49.02 0 1263369..1264802 - 477 147674445 - VC0395_A1199 - putative multidrug transporter 1171 45.45 0 1264951..1265775 + 274 147675228 - VC0395_A1200 - hypothetical protein 1172 42.72 -1 1266481..1266885 + 134 147673247 - VC0395_A1203 - GGDEF family protein 1173 42.52 -1 1266860..1267447 + 195 147673926 - VC0395_A1204 - GGDEF family protein 1174 42.75 -1 1267450..1268139 - 229 147674541 - VC0395_A1205 - hypothetical protein 1175 44.28 0 1268254..1269057 - 267 147675133 - VC0395_A1206 - hypothetical protein 1176 45.19 0 1269189..1270175 - 328 147674998 cheV-1 VC0395_A1207 - chemotaxis protein CheV 1177 43.50 -1 1270194..1270970 - 258 147675751 - VC0395_A1208 - hypothetical protein 1178 49.20 0 1271036..1271722 - 228 147673209 - VC0395_A1209 - response regulator 1179 48.55 0 1271722..1273338 - 538 147673767 - VC0395_A1210 - putative sensor kinase citA 1180 47.73 0 1274068..1275498 + 476 147674749 - VC0395_A1211 - hypothetical protein 1181 51.08 0 1275510..1276484 + 324 147675362 - VC0395_A1212 - hypothetical protein 1182 49.66 0 1276488..1277651 + 387 147674232 - VC0395_A1213 - hypothetical protein 1183 48.65 0 1277648..1278796 + 382 147674169 - VC0395_A1214 - hypothetical protein 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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