version 1.0
Vibrio cholerae O395 chromosome 2, complete sequence - 1..3024069 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1053 38.10 -2 1133995..1134162 - 55 147674627 - VC0395_A1082 - hypothetical protein 1054 50.36 0 1134400..1135092 - 230 147674799 - VC0395_A1083 - hypothetical protein 1055 46.67 0 1135222..1135506 - 94 147674344 - VC0395_A1084 - hypothetical protein 1056 48.88 0 1135511..1137079 - 522 147673446 cri-1 VC0395_A1085 - plasmid replication protein Cri 1057 41.49 -1 1137256..1137807 + 183 147675257 tlcR-1 VC0395_A1086 - tlcR protein 1058 37.22 -2 1138977..1139336 - 119 147673241 - VC0395_A1087 - hypothetical protein 1059 43.54 -1 1139447..1139779 - 110 147673500 - VC0395_A1088 - hypothetical protein 1060 40.20 -1 1139784..1140293 - 169 147675509 - VC0395_A1089 - hypothetical protein 1061 43.91 -1 1140250..1142046 + 598 147675072 - VC0395_A1090 - hypothetical protein 1062 44.51 0 1142111..1142629 + 172 147674296 fabA VC0395_A1091 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1063 45.72 0 1143052..1144746 - 564 147675149 - VC0395_A1092 - hypothetical protein 1064 45.00 0 1144752..1146671 - 639 147673353 - VC0395_A1093 - ABC transporter ATPase component 1065 41.15 -1 1146649..1146891 - 80 147675151 - VC0395_A1094 - hypothetical protein 1066 46.26 0 1146900..1149026 - 708 147673350 - VC0395_A1095 - 23S rRNA m(2)G2445 methyltransferase 1067 35.61 -2 1148998..1149129 - 43 147673960 - VC0395_A1096 - hypothetical protein 1068 44.75 0 1149486..1150028 - 180 147674895 - VC0395_A1097 - hypothetical protein 1069 45.40 0 1150183..1151193 - 336 147675557 pyrD VC0395_A1098 - dihydroorotate dehydrogenase 2 1070 47.24 0 1151267..1155415 - 1382 147673706 - VC0395_A1099 - hypothetical protein 1071 44.89 0 1155512..1156108 - 198 147674485 - VC0395_A1100 - NAD-specific glutamate dehydrogenase 1072 38.82 -2 1156297..1156533 - 78 147675090 - VC0395_A1101 - hypothetical protein 1073 47.72 0 1156567..1159173 - 868 147673795 pepN VC0395_A1102 - aminopeptidase N 1074 43.24 -1 1159372..1160088 - 238 147675630 - VC0395_A1103 - hypothetical protein 1075 44.09 0 1160197..1162194 - 665 147673268 prc VC0395_A1104 - carboxy-terminal protease 1076 46.89 0 1162212..1162838 - 208 147674881 - VC0395_A1105 - putative solute/DNA competence effector 1077 43.70 -1 1162939..1163517 - 192 147674457 - VC0395_A1106 - hypothetical protein 1078 46.75 0 1163462..1165294 + 610 147674056 - VC0395_A1107 - ABC transporter, ATP-binding protein 1079 48.17 0 1165328..1166587 + 419 147675189 - VC0395_A1108 - hypothetical protein 1080 49.05 0 1166597..1169236 + 879 147674478 - VC0395_A1109 - hypothetical protein 1081 48.74 0 1169267..1170778 + 503 147674343 yebU VC0395_A1110 - rRNA (cytosine-C(5)-)-methyltransferase RsmF 1082 43.92 -1 1170960..1171856 - 298 147673626 - VC0395_A1111 - hypothetical protein 1083 46.59 0 1171895..1173244 + 449 147674673 - VC0395_A1113 - hypothetical protein 1084 47.80 0 1173237..1173713 - 158 147675310 - VC0395_A1112 - hypothetical protein 1085 48.06 0 1173863..1175050 + 395 147675263 aroH VC0395_A1114 - phospho-2-dehydro-3-deoxyheptonate aldolase 1086 47.00 0 1175062..1175544 + 160 147674648 - VC0395_A1115 - nucleotide-binding protein 1087 50.77 0 1175679..1176458 - 259 147673738 cobB VC0395_A1116 - NAD-dependent deacetylase 1088 47.99 0 1176556..1176978 - 140 147673164 - VC0395_A1117 - hypothetical protein 1089 49.53 0 1176965..1178038 - 357 147675698 fdnI VC0395_A1118 - formate dehydrogenase, cytochrome B556 subunit 1090 53.04 +1 1178039..1178647 - 202 147675071 fdhB VC0395_A1119 - formate dehydrogenase, iron-sulfur subunit 1091 51.33 0 1178659..1181514 - 951 147674130 - VC0395_A1120 - putative formate dehydrogenase, alpha subunit 1092 50.00 0 1181526..1181723 - 65 147673386 - VC0395_A1121 - hypothetical protein 1093 51.64 0 1181800..1182471 - 223 147674264 - VC0395_A1122 - putative chaperone, formate dehydrogenase-specific 1094 50.42 0 1182497..1184158 - 553 147673441 - VC0395_A1123 - iron-sulfur cluster-binding protein 1095 48.65 0 1184357..1185022 - 221 147673884 - VC0395_A1124 - hypothetical protein 1096 53.46 +1 1184949..1185425 - 158 147673044 - VC0395_A1125 - hypothetical protein 1097 48.92 0 1185470..1186483 + 337 147675414 fdhD VC0395_A1126 - formate dehydrogenase accessory protein 1098 48.78 0 1186590..1188182 - 530 147674653 - VC0395_A1127 - ABC transporter, ATP-binding protein 1099 47.64 0 1188394..1190427 - 677 147673472 - VC0395_A1128 - sensor histidine kinase 1100 50.79 0 1190417..1191871 - 484 147675634 - VC0395_A1129 - sigma-54 dependent response regulator 1101 46.62 0 1192163..1192990 + 275 147674726 - VC0395_A1130 - hypothetical protein 1102 51.65 0 1192997..1193695 + 232 147674121 - VC0395_A1131 - ABC transporter, permease protein 1103 48.96 0 1193704..1194426 + 240 147674476 - VC0395_A1132 - ABC transporter, ATP-binding protein 1104 48.69 0 1194380..1194991 + 203 147675242 mobA VC0395_A1133 - molybdopterin-guanine dinucleotide biosynthesis protein A 1105 50.30 0 1194988..1196808 + 606 147674408 moeA-1 VC0395_A1134 - molybdopterin biosynthesis MoeA protein 1106 39.90 -2 1196898..1197278 - 126 147675216 - VC0395_A1135 - hypothetical protein 1107 38.89 -2 1197688..1197849 - 53 147673565 - VC0395_A1136 - hypothetical protein 1108 42.39 -1 1197893..1198168 + 91 147674385 - VC0395_A1137 - hypothetical protein 1109 49.61 0 1198375..1199283 - 302 147674774 - VC0395_A1138 - N-acetyl-D-glucosamine kinase 1110 47.29 0 1199446..1200183 - 245 147673302 - VC0395_A1139 - hypothetical protein 1111 48.42 0 1200160..1201074 + 304 147673952 - VC0395_A1140 - hypothetical protein 1112 47.68 0 1201076..1203097 - 673 147674542 - VC0395_A1141 - methyl-accepting chemotaxis protein 1113 46.11 0 1203186..1203686 + 166 147673576 nlpC VC0395_A1142 - lipoprotein NlpC 1114 43.29 -1 1203696..1204127 - 143 147675224 - VC0395_A1143 - hypothetical protein 1115 44.87 0 1204556..1205422 + 288 147673857 - VC0395_A1144 - hypothetical protein 1116 44.61 0 1205580..1205783 + 67 147673093 - VC0395_A1145 - hypothetical protein 1117 48.99 0 1206026..1207411 + 461 147675290 - VC0395_A1146 - multidrug efflux protein 1118 47.87 0 1207615..1208598 + 327 147675575 - VC0395_A1147 - putative lipoprotein 1119 49.82 0 1208605..1209453 - 282 147674166 ligA-2 VC0395_A1148 - DNA ligase 1120 48.18 0 1209760..1210938 - 392 147673413 - VC0395_A1149 - hypothetical protein 1121 52.33 +1 1210935..1211555 - 206 147675420 tonB2 VC0395_A1150 - tonB2 protein 1122 50.37 0 1211555..1211959 - 134 147674469 exbD2 VC0395_A1151 - TonB system transport protein ExbD2 1123 49.36 0 1211956..1212498 - 180 147675745 exbB2 VC0395_A1152 - TonB system transport protein ExbB2 1124 51.02 0 1212505..1213878 - 457 147673075 - VC0395_A1153 - MotA/TolQ/ExbB proton channel family protein 1125 47.83 0 1213878..1214636 - 252 147673457 - VC0395_A1154 - hypothetical protein 1126 48.51 0 1214955..1216259 + 434 147674211 ugpB VC0395_A1155 - glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein 1127 50.57 0 1216335..1217216 + 293 147673846 ugpA VC0395_A1156 - glycerol-3-phosphate ABC transporter, permease protein 1128 46.86 0 1217226..1218068 + 280 147674616 ugpE VC0395_A1157 - glycerol-3-phosphate ABC transporter, permease protein 1129 49.96 0 1218121..1219239 + 372 147673046 ugpC VC0395_A1158 - glycerol-3-phosphate transporter ATP-binding subunit 1130 48.82 0 1219264..1220025 + 253 147673808 glpR VC0395_A1159 - glycerol-3-phosphate regulon repressor 1131 47.90 0 1220053..1220766 + 237 147674964 - VC0395_A1160 - putative glycerophosphoryl diester phosphodiesterase 1132 50.74 0 1220842..1221312 - 156 147675741 - VC0395_A1161 - hypothetical protein 1133 52.07 +1 1221323..1221685 - 120 147675253 - VC0395_A1162 - hypothetical protein 1134 43.94 -1 1221642..1221773 + 43 147674455 - VC0395_A1163 - hypothetical protein 1135 48.50 0 1221820..1222854 - 344 147675752 - VC0395_A1164 - LacI family transcription regulator 1136 47.25 0 1222890..1224326 - 478 147673845 bglA VC0395_A1165 - 6-phospho-beta-glucosidase 1137 51.08 0 1224739..1226913 + 724 147674207 perA VC0395_A1166 - catalase/peroxidase 1138 43.12 -1 1226978..1227907 - 309 147673422 - VC0395_A1167 - LysR family transcriptional regulator 1139 44.16 0 1227971..1229143 + 390 147674576 - VC0395_A1168 - metallo-beta-lactamase superfamily protein 1140 48.59 0 1229320..1230453 + 377 147674153 - VC0395_A1169 - membrane-fusion protein 1141 48.89 0 1230446..1231705 + 419 147673121 - VC0395_A1170 - putative outer membrane protein TolC 1142 50.70 0 1231705..1232919 + 404 147675384 - VC0395_A1171 - hypothetical protein 1143 50.08 0 1232923..1234200 + 425 147675463 - VC0395_A1172 - hypothetical protein 1144 50.00 0 1234200..1234901 + 233 147675008 - VC0395_A1173 - ABC transporter, ATP-binding protein 1145 50.86 0 1234975..1235967 - 330 147673606 qxtB VC0395_A1174 - quinol oxidase, subunit II 1146 50.75 0 1235964..1237301 - 445 147675651 qxtA VC0395_A1175 - quinol oxidase, subunit I 1147 44.62 0 1237824..1238204 + 126 147675203 - VC0395_A1176 - hypothetical protein 1148 52.09 +1 1238220..1239605 + 461 147674412 fumC VC0395_A1177 - fumarate hydratase 1149 44.27 0 1239736..1240119 - 127 147673036 - VC0395_A1178 - hypothetical protein 1150 45.97 0 1240164..1240622 - 152 147675386 - VC0395_A1179 - hypothetical protein 1151 45.22 0 1240625..1240969 - 114 147674593 - VC0395_A1180 - hypothetical protein 1152 46.84 0 1241125..1241946 - 273 147674196 - VC0395_A1181 - hypothetical protein 47.83 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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