version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 869 39.92 -1 835734..836795 + 353 15601639 - VCA0884 - hypothetical protein 870 48.74 0 837892..838923 - 343 15601640 tdh VCA0885 - L-threonine 3-dehydrogenase 871 50.59 0 838926..840119 - 397 15601641 - VCA0886 - 2-amino-3-ketobutyrate coenzyme A ligase 872 44.23 0 841276..842037 + 253 15601642 - VCA0888 - LuxR family transcriptional regulator 873 50.27 0 842137..843075 + 312 15601643 - VCA0889 - LysR family transcriptional regulator 874 47.92 0 843069..843452 + 127 15601644 - VCA0890 - glyoxylase I family protein 875 51.03 +1 843530..844942 - 470 15601645 - VCA0891 - hypothetical protein 876 46.62 0 845054..845452 - 132 15601646 - VCA0892 - hypothetical protein 877 45.88 0 845558..846067 - 169 15601647 - VCA0893 - hypothetical protein 878 50.60 0 846018..846764 - 248 15601648 - VCA0894 - putative hydrolase 879 47.90 0 846932..849877 + 981 15601649 - VCA0895 - chemotactic transducer-related protein 880 50.46 0 850221..851726 + 501 15601650 - VCA0896 - glucose-6-phosphate 1-dehydrogenase 881 51.32 +1 851723..852439 + 238 15601651 - VCA0897 - 6-phosphogluconolactonase 882 50.59 0 852453..853901 + 482 15601652 - VCA0898 - 6-phosphogluconate dehydrogenase 883 42.75 0 854057..854194 + 45 15601653 - VCA0899 - hypothetical protein 884 47.32 0 854462..855376 + 304 15601654 - VCA0900 - hypothetical protein 885 50.32 0 855370..855999 + 209 15601655 - VCA0901 - hypothetical protein 886 44.32 0 856032..856868 - 278 15601656 - VCA0902 - hypothetical protein 887 52.82 +1 857004..858137 - 377 15601657 - VCA0903 - hypothetical protein 888 49.52 0 858156..859508 - 450 15601658 - VCA0904 - permease 889 47.28 0 859667..860806 - 379 15601659 - VCA0905 - hypothetical protein 890 46.46 0 860947..862683 - 578 15601660 - VCA0906 - methyl-accepting chemotaxis protein 891 47.08 0 862985..863515 - 176 15601661 - VCA0907 - hypothetical protein 892 45.36 0 863540..864121 - 193 15601662 - VCA0908 - hypothetical protein 893 49.49 0 864067..865434 - 455 15601663 - VCA0909 - coproporphyrinogen III oxidase 894 50.13 0 865691..866440 + 249 15601664 - VCA0910 - tonB1 protein 895 53.13 +1 866440..867126 + 228 15601665 - VCA0911 - TonB system transport protein ExbB1 896 47.72 0 867123..867539 + 138 15601666 - VCA0912 - TonB system transport protein ExbD1 897 49.88 0 867550..868383 + 277 15601667 - VCA0913 - hemin ABC transporter, periplasmic hemin-binding protein HutB 898 52.52 +1 868395..869426 + 343 15601668 - VCA0914 - hemin ABC transporter, permease protein, putative 899 52.04 +1 869494..870204 + 236 15601669 - VCA0915 - hemin importer ATP-binding subunit 900 46.46 0 870279..870377 - 32 15601670 - VCA0916 - hypothetical protein 901 45.47 0 870338..870823 - 161 15601671 - VCA0917 - TetR family transcriptional regulator 902 39.58 -1 870792..870887 - 31 15601672 - VCA0918 - hypothetical protein 903 44.22 0 871322..871624 + 100 15601673 - VCA0919 - hypothetical protein 904 48.83 0 871827..872426 + 199 15601674 - VCA0920 - hypothetical protein 905 46.29 0 872487..873605 - 372 15601675 - VCA0921 - hypothetical protein 906 49.26 0 873771..874379 + 202 15601676 - VCA0922 - hypothetical protein 907 47.52 0 874442..876400 + 652 15601677 - VCA0923 - methyl-accepting chemotaxis protein 908 49.72 0 876463..878451 - 662 15601678 - VCA0924 - hypothetical protein 909 52.80 +1 878819..879871 + 350 15601679 - VCA0925 - dihydroorotase 910 47.18 0 879934..881031 - 365 15601680 - VCA0926 - AraC/XylS family transcriptional regulator 911 46.44 0 881142..881492 + 116 15601681 - VCA0927 - hypothetical protein 912 45.49 0 881489..881998 + 169 15601682 - VCA0928 - hypothetical protein 913 51.42 +1 882048..883175 - 375 15601683 rumB VCA0929 - 23S rRNA methyluridine methyltransferase 914 49.81 0 883289..884314 - 341 15601684 - VCA0930 - hypothetical protein 915 47.79 0 884337..885719 - 460 15601685 - VCA0931 - hypothetical protein 916 40.58 -1 885705..885842 + 45 15601686 - VCA0932 - hypothetical protein 917 39.44 -1 886068..886280 + 70 15601687 - VCA0933 - cold shock domain-contain protein 918 36.27 -2 886377..886478 - 33 15601688 - VCA0934 - hypothetical protein 919 43.98 0 886850..887206 + 118 15601689 - VCA0935 - hypothetical protein 920 51.86 +1 887418..888356 + 312 15601690 - VCA0936 - hypothetical protein 921 48.48 0 888345..889136 - 263 15601691 - VCA0937 - AraC/XylS family transcriptional regulator 922 45.45 0 890253..891218 + 321 15601692 - VCA0939 - sensory box/GGDEF family protein 923 48.03 0 891370..892131 + 253 15601693 - VCA0940 - DeoR family transcriptional regulator 924 48.06 0 892283..892771 + 162 15601694 - VCA0941 - acyl-CoA thioester hydrolase-related protein 925 46.95 0 892855..893133 + 92 15601695 - VCA0942 - hypothetical protein 926 49.38 0 893457..894347 - 296 15601696 malG VCA0943 - maltose transporter permease 927 48.19 0 894359..895933 - 524 15601697 malF VCA0944 - maltose transporter membrane protein 928 47.26 0 896008..897228 - 406 15601698 malE VCA0945 - maltose ABC transporter periplasmic protein 929 50.18 0 897862..898983 + 373 15601699 - VCA0946 - maltose/maltodextrin transporter ATP-binding protein 930 41.76 0 899206..899727 + 173 15601700 - VCA0947 - spermidine n1-acetyltransferase 931 43.09 0 899732..899977 + 81 15601701 - VCA0948 - hypothetical protein 932 46.76 0 900115..900732 - 205 15601702 - VCA0949 - SM-20-related protein 933 42.64 0 900851..900979 - 42 15601703 - VCA0950 - hypothetical protein 934 49.53 0 900939..901259 + 106 15601704 - VCA0951 - hypothetical protein 935 36.74 -1 901426..902100 - 224 15601705 - VCA0952 - LuxR family transcriptional regulator 936 46.59 0 902678..902956 - 92 15601706 - VCA0953 - peptidyl-prolyl cis-trans isomerase C 937 46.58 0 903131..904051 + 306 15601707 - VCA0954 - chemotaxis protein CheV, putative 938 48.38 0 904127..904651 - 174 15601708 - VCA0955 - MarR family transcriptional regulator 939 45.59 0 904820..905839 + 339 15601709 - VCA0956 - GGDEF family protein 940 44.01 0 905958..906566 - 202 15601710 - VCA0957 - malate synthase 941 48.42 0 906685..908202 + 505 15601711 - VCA0958 - hypothetical protein 942 33.33 -2 908305..908463 - 52 15601712 - VCA0959 - hypothetical protein 943 45.49 0 908482..909855 - 457 15601713 - VCA0960 - GGDEF family protein 944 45.65 0 910197..910805 + 202 15601714 - VCA0961 - hypothetical protein 945 48.72 0 911092..912300 + 402 15601715 - VCA0962 - hypothetical protein 946 46.32 0 912325..913248 - 307 15601716 - VCA0963 - hypothetical protein 947 45.92 0 913349..914254 + 301 15601717 - VCA0964 - glycine cleavage operon activator, putative 948 42.65 0 914406..915596 + 396 15601718 - VCA0965 - GGDEF family protein 949 48.82 0 915599..915895 - 98 15601719 - VCA0966 - hypothetical protein 950 49.52 0 915858..915962 - 34 15601720 - VCA0967 - hypothetical protein 951 43.75 0 915982..916077 + 31 15601721 - VCA0968 - hypothetical protein 952 51.00 +1 916070..916918 + 282 15601722 - VCA0969 - pirin-related protein 953 47.62 0 917056..917370 - 104 15601723 - VCA0970 - hypothetical protein 954 45.12 0 917882..918322 + 146 15601724 - VCA0971 - hypothetical protein 955 46.51 0 918331..919635 - 434 15601725 - VCA0972 - hypothetical protein 956 33.33 -2 919692..919865 + 57 15601726 - VCA0973 - hypothetical protein 957 48.81 0 919898..921583 - 561 15601727 - VCA0974 - methyl-accepting chemotaxis protein 958 48.12 0 921798..924158 - 786 15601728 - VCA0975 - ATP-dependent protease LA-related protein 959 47.07 0 924362..924856 + 164 15601729 - VCA0976 - hypothetical protein 960 48.46 0 924885..926504 + 539 15601730 - VCA0977 - ABC transporter, ATP-binding protein 961 44.40 0 926671..927402 - 243 15601731 - VCA0978 - amino acid ABC transporter, periplasmic amino acid-binding protein, putative 962 47.46 0 927422..928306 - 294 15601732 - VCA0979 - methyl-accepting chemotaxis protein 963 43.10 0 928326..928970 - 214 15601733 - VCA0980 - hypothetical protein 964 45.83 0 929101..929844 - 247 15601734 - VCA0981 - hypothetical protein 965 48.67 0 929998..930897 - 299 15601735 - VCA0982 - LysR family transcriptional regulator 966 52.60 +1 931049..932797 + 582 15601736 - VCA0983 - L-lactate permease, putative 967 54.00 +1 932920..934056 + 378 15601737 lldD VCA0984 - L-lactate dehydrogenase 968 53.44 +1 934154..937033 + 959 15601738 - VCA0985 - oxidoreductase/iron-sulfur cluster-binding protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.