version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 839 51.11 +1 805131..806390 - 419 15601609 - VCA0854 - hypothetical protein 840 50.15 0 806378..807061 - 227 15601610 - VCA0855 - ABC transporter, ATP-binding protein 841 49.40 0 807070..807741 - 223 15601611 - VCA0856 - hypothetical protein 842 49.63 0 807768..807902 + 44 15601612 - VCA0857 - hypothetical protein 843 45.14 0 807903..808046 + 47 15601613 - VCA0858 - hypothetical protein 844 50.32 0 808054..808977 - 307 15601614 - VCA0859 - aldo/keto reductase family oxidoreductase 845 51.81 +1 809269..811341 + 690 15601615 malS VCA0860 - periplasmic alpha-amylase precursor 846 42.31 0 811283..811516 + 77 15601616 - VCA0861 - hypothetical protein 847 50.77 +1 811876..813114 + 412 15601617 - VCA0862 - long-chain fatty acid transport protein 848 49.18 0 813130..815520 + 796 15601618 - VCA0863 - lipase, putative 849 44.06 0 815881..817278 + 465 15601619 - VCA0864 - methyl-accepting chemotaxis protein 850 50.00 0 817359..819188 - 609 15601620 - VCA0865 - hemagglutinin/protease 851 36.67 -1 819174..819413 + 79 15601621 - VCA0866 - hypothetical protein 852 42.97 0 819609..820262 - 217 15601622 - VCA0867 - outer membrane protein W 853 48.72 0 820452..820685 + 77 15601623 - VCA0868 - hypothetical protein 854 47.47 0 821082..821180 - 32 15601624 - VCA0869 - hypothetical protein 855 46.16 0 821216..822166 + 316 15601625 pbpG VCA0870 - D-alanyl-D-alanine endopeptidase 856 43.67 0 822401..823822 + 473 15601626 - VCA0871 - GntR family transcriptional regulator 857 47.27 0 823951..825543 + 530 15601627 - VCA0872 - cytochrome d ubiquinol oxidase, subunit I 858 44.24 0 825556..826692 + 378 15601628 - VCA0873 - cytochrome d ubiquinol oxidase, subunit II 859 35.78 -2 827514..827717 + 67 15601629 - VCA0874 - hypothetical protein 860 46.83 0 827934..829259 - 441 15601630 - VCA0875 - D-serine dehydratase 861 38.31 -1 829467..830411 + 314 15601631 - VCA0876 - DNA-binding transcriptional regulator DsdC 862 51.35 +1 830711..831787 + 358 15601632 - VCA0877 - hydrolase, putative 863 45.68 0 831895..832056 + 53 15601633 - VCA0878 - integrase-related protein 864 36.54 -1 832585..832740 - 51 15601634 - VCA0879 - hypothetical protein 865 40.94 -1 832685..833065 + 126 15601635 - VCA0880 - hypothetical protein 866 40.91 -1 833090..833485 + 131 15601636 - VCA0881 - hypothetical protein 867 41.31 0 833497..834561 + 354 15601637 - VCA0882 - hypothetical protein 868 43.60 0 834574..835683 + 369 15601638 - VCA0883 - hypothetical protein 869 39.92 -1 835734..836795 + 353 15601639 - VCA0884 - hypothetical protein 870 48.74 0 837892..838923 - 343 15601640 tdh VCA0885 - L-threonine 3-dehydrogenase 871 50.59 0 838926..840119 - 397 15601641 - VCA0886 - 2-amino-3-ketobutyrate coenzyme A ligase 872 44.23 0 841276..842037 + 253 15601642 - VCA0888 - LuxR family transcriptional regulator 873 50.27 0 842137..843075 + 312 15601643 - VCA0889 - LysR family transcriptional regulator 874 47.92 0 843069..843452 + 127 15601644 - VCA0890 - glyoxylase I family protein 875 51.03 +1 843530..844942 - 470 15601645 - VCA0891 - hypothetical protein 876 46.62 0 845054..845452 - 132 15601646 - VCA0892 - hypothetical protein 877 45.88 0 845558..846067 - 169 15601647 - VCA0893 - hypothetical protein 878 50.60 0 846018..846764 - 248 15601648 - VCA0894 - putative hydrolase 879 47.90 0 846932..849877 + 981 15601649 - VCA0895 - chemotactic transducer-related protein 880 50.46 0 850221..851726 + 501 15601650 - VCA0896 - glucose-6-phosphate 1-dehydrogenase 881 51.32 +1 851723..852439 + 238 15601651 - VCA0897 - 6-phosphogluconolactonase 882 50.59 0 852453..853901 + 482 15601652 - VCA0898 - 6-phosphogluconate dehydrogenase 883 42.75 0 854057..854194 + 45 15601653 - VCA0899 - hypothetical protein 884 47.32 0 854462..855376 + 304 15601654 - VCA0900 - hypothetical protein 885 50.32 0 855370..855999 + 209 15601655 - VCA0901 - hypothetical protein 886 44.32 0 856032..856868 - 278 15601656 - VCA0902 - hypothetical protein 887 52.82 +1 857004..858137 - 377 15601657 - VCA0903 - hypothetical protein 888 49.52 0 858156..859508 - 450 15601658 - VCA0904 - permease 889 47.28 0 859667..860806 - 379 15601659 - VCA0905 - hypothetical protein 890 46.46 0 860947..862683 - 578 15601660 - VCA0906 - methyl-accepting chemotaxis protein 891 47.08 0 862985..863515 - 176 15601661 - VCA0907 - hypothetical protein 892 45.36 0 863540..864121 - 193 15601662 - VCA0908 - hypothetical protein 893 49.49 0 864067..865434 - 455 15601663 - VCA0909 - coproporphyrinogen III oxidase 894 50.13 0 865691..866440 + 249 15601664 - VCA0910 - tonB1 protein 895 53.13 +1 866440..867126 + 228 15601665 - VCA0911 - TonB system transport protein ExbB1 896 47.72 0 867123..867539 + 138 15601666 - VCA0912 - TonB system transport protein ExbD1 897 49.88 0 867550..868383 + 277 15601667 - VCA0913 - hemin ABC transporter, periplasmic hemin-binding protein HutB 898 52.52 +1 868395..869426 + 343 15601668 - VCA0914 - hemin ABC transporter, permease protein, putative 899 52.04 +1 869494..870204 + 236 15601669 - VCA0915 - hemin importer ATP-binding subunit 900 46.46 0 870279..870377 - 32 15601670 - VCA0916 - hypothetical protein 901 45.47 0 870338..870823 - 161 15601671 - VCA0917 - TetR family transcriptional regulator 902 39.58 -1 870792..870887 - 31 15601672 - VCA0918 - hypothetical protein 903 44.22 0 871322..871624 + 100 15601673 - VCA0919 - hypothetical protein 904 48.83 0 871827..872426 + 199 15601674 - VCA0920 - hypothetical protein 905 46.29 0 872487..873605 - 372 15601675 - VCA0921 - hypothetical protein 906 49.26 0 873771..874379 + 202 15601676 - VCA0922 - hypothetical protein 907 47.52 0 874442..876400 + 652 15601677 - VCA0923 - methyl-accepting chemotaxis protein 908 49.72 0 876463..878451 - 662 15601678 - VCA0924 - hypothetical protein 909 52.80 +1 878819..879871 + 350 15601679 - VCA0925 - dihydroorotase 910 47.18 0 879934..881031 - 365 15601680 - VCA0926 - AraC/XylS family transcriptional regulator 911 46.44 0 881142..881492 + 116 15601681 - VCA0927 - hypothetical protein 912 45.49 0 881489..881998 + 169 15601682 - VCA0928 - hypothetical protein 913 51.42 +1 882048..883175 - 375 15601683 rumB VCA0929 - 23S rRNA methyluridine methyltransferase 914 49.81 0 883289..884314 - 341 15601684 - VCA0930 - hypothetical protein 915 47.79 0 884337..885719 - 460 15601685 - VCA0931 - hypothetical protein 916 40.58 -1 885705..885842 + 45 15601686 - VCA0932 - hypothetical protein 917 39.44 -1 886068..886280 + 70 15601687 - VCA0933 - cold shock domain-contain protein 918 36.27 -2 886377..886478 - 33 15601688 - VCA0934 - hypothetical protein 919 43.98 0 886850..887206 + 118 15601689 - VCA0935 - hypothetical protein 920 51.86 +1 887418..888356 + 312 15601690 - VCA0936 - hypothetical protein 921 48.48 0 888345..889136 - 263 15601691 - VCA0937 - AraC/XylS family transcriptional regulator 922 45.45 0 890253..891218 + 321 15601692 - VCA0939 - sensory box/GGDEF family protein 923 48.03 0 891370..892131 + 253 15601693 - VCA0940 - DeoR family transcriptional regulator 924 48.06 0 892283..892771 + 162 15601694 - VCA0941 - acyl-CoA thioester hydrolase-related protein 925 46.95 0 892855..893133 + 92 15601695 - VCA0942 - hypothetical protein 926 49.38 0 893457..894347 - 296 15601696 malG VCA0943 - maltose transporter permease 927 48.19 0 894359..895933 - 524 15601697 malF VCA0944 - maltose transporter membrane protein 928 47.26 0 896008..897228 - 406 15601698 malE VCA0945 - maltose ABC transporter periplasmic protein 929 50.18 0 897862..898983 + 373 15601699 - VCA0946 - maltose/maltodextrin transporter ATP-binding protein 930 41.76 0 899206..899727 + 173 15601700 - VCA0947 - spermidine n1-acetyltransferase 931 43.09 0 899732..899977 + 81 15601701 - VCA0948 - hypothetical protein 932 46.76 0 900115..900732 - 205 15601702 - VCA0949 - SM-20-related protein 933 42.64 0 900851..900979 - 42 15601703 - VCA0950 - hypothetical protein 934 49.53 0 900939..901259 + 106 15601704 - VCA0951 - hypothetical protein 935 36.74 -1 901426..902100 - 224 15601705 - VCA0952 - LuxR family transcriptional regulator 936 46.59 0 902678..902956 - 92 15601706 - VCA0953 - peptidyl-prolyl cis-trans isomerase C 937 46.58 0 903131..904051 + 306 15601707 - VCA0954 - chemotaxis protein CheV, putative 938 48.38 0 904127..904651 - 174 15601708 - VCA0955 - MarR family transcriptional regulator 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.