version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 792 46.00 0 751488..752324 + 278 15601562 - VCA0807 - ABC transporter, periplasmic substrate-binding protein 793 47.33 0 752470..753162 - 230 15601563 - VCA0808 - NodN-related protein 794 47.97 0 753436..754986 - 516 15601564 - VCA0809 - hypothetical protein 795 44.93 0 755312..755449 - 45 15601565 - VCA0810 - hypothetical protein 796 50.14 0 755480..756937 + 485 15601566 - VCA0811 - N-acetylglucosamine-binding protein A 797 47.10 0 757265..758695 + 476 15601567 - VCA0812 - leucine aminopeptidase-related protein 798 49.14 0 758730..760235 + 501 15601568 - VCA0813 - aminopeptidase 799 50.75 0 760423..761352 - 309 15601569 - VCA0814 - agmatinase 800 48.64 0 761353..763338 - 661 15601570 - VCA0815 - arginine decarboxylase 801 36.05 -2 763408..763554 - 48 15601571 - VCA0816 - hypothetical protein 802 47.01 0 763686..764270 + 194 15601572 - VCA0817 - hypothetical protein 803 48.94 0 764273..765637 + 454 15601573 - VCA0818 - magnesium transporter MgtE, putative 804 45.70 0 765822..766112 + 96 15601574 groES VCA0819 - co-chaperonin GroES 805 51.48 +1 766141..767733 + 530 15601575 groEL VCA0820 - chaperonin GroEL 806 51.69 +1 767766..767972 + 68 15601576 - VCA0821 - hypothetical protein 807 49.61 0 768053..769477 - 474 15601577 - VCA0822 - aspartate kinase 808 46.04 0 769474..769890 - 138 15601578 ectC VCA0823 - L-ectoine synthase 809 50.73 0 769955..771190 - 411 15601579 - VCA0824 - diaminobutyrate--2-oxoglutarate aminotransferase 810 48.66 0 771214..771735 - 173 15601580 - VCA0825 - L-2,4-diaminobutyric acid acetyltransferase 811 32.48 -2 771848..771964 - 38 15601581 - VCA0826 - hypothetical protein 812 43.94 0 772435..772764 - 109 15601582 phhB VCA0827 - pterin-4-alpha-carbinolamine dehydratase 813 47.13 0 772754..773623 - 289 15601583 phhA VCA0828 - phenylalanine 4-monooxygenase 814 48.72 0 773782..775731 + 649 15601584 - VCA0829 - acetoacetyl-CoA synthetase 815 47.90 0 775834..776808 + 324 15601585 - VCA0830 - LysR family transcriptional regulator 816 38.97 -1 776810..777004 + 64 15601586 - VCA0831 - hypothetical protein 817 48.66 0 777308..777940 - 210 15601587 - VCA0832 - methyltransferase, putative 818 46.64 0 778082..778960 + 292 15601588 - VCA0833 - LysR family transcriptional regulator 819 48.53 0 779097..780050 + 317 15601589 - VCA0834 - hypothetical protein 820 51.37 +1 780082..781068 - 328 15601590 - VCA0835 - hypothetical protein 821 48.88 0 781106..781684 - 192 15601591 - VCA0836 - hexapeptide repeat-containing acetyltransferase 822 48.25 0 781822..783135 - 437 15601592 - VCA0837 - hemolysin, putative 823 47.90 0 783290..783694 - 134 15601593 - VCA0838 - hypothetical protein 824 46.97 0 783716..783847 + 43 15601594 - VCA0839 - hypothetical protein 825 46.91 0 784587..785072 + 161 15601595 - VCA0840 - deoxycytidylate deaminase, putative 826 43.94 0 785126..785257 - 43 15601596 - VCA0841 - hypothetical protein 827 45.10 0 785502..785654 - 50 15601597 - VCA0842 - hypothetical protein 828 49.02 0 785728..787257 + 509 15601598 - VCA0843 - glyceraldehyde-3-phosphate dehydrogenase 829 44.90 0 787373..787519 + 48 15601599 - VCA0844 - hypothetical protein 830 43.27 0 787471..787782 + 103 15601600 - VCA0845 - hypothetical protein 831 51.06 +1 787831..788445 - 204 15601601 - VCA0846 - hypothetical protein 832 50.44 0 788631..789875 + 414 161582038 - VCA0847 - inner membrane protein YjeH 833 44.95 0 789918..790898 - 326 15601603 - VCA0848 - GGDEF family protein 834 50.12 0 791029..800820 - 3263 15601604 - VCA0849 - hypothetical protein 835 46.56 0 801121..801906 - 261 15601605 - VCA0850 - response regulator 836 46.67 0 802066..803145 - 359 15601606 - VCA0851 - hypothetical protein 837 50.12 0 803146..804390 - 414 15601607 - VCA0852 - hypothetical protein 838 47.72 0 804395..805138 - 247 15601608 - VCA0853 - hypothetical protein 839 51.11 +1 805131..806390 - 419 15601609 - VCA0854 - hypothetical protein 840 50.15 0 806378..807061 - 227 15601610 - VCA0855 - ABC transporter, ATP-binding protein 841 49.40 0 807070..807741 - 223 15601611 - VCA0856 - hypothetical protein 842 49.63 0 807768..807902 + 44 15601612 - VCA0857 - hypothetical protein 843 45.14 0 807903..808046 + 47 15601613 - VCA0858 - hypothetical protein 844 50.32 0 808054..808977 - 307 15601614 - VCA0859 - aldo/keto reductase family oxidoreductase 845 51.81 +1 809269..811341 + 690 15601615 malS VCA0860 - periplasmic alpha-amylase precursor 846 42.31 0 811283..811516 + 77 15601616 - VCA0861 - hypothetical protein 847 50.77 +1 811876..813114 + 412 15601617 - VCA0862 - long-chain fatty acid transport protein 848 49.18 0 813130..815520 + 796 15601618 - VCA0863 - lipase, putative 849 44.06 0 815881..817278 + 465 15601619 - VCA0864 - methyl-accepting chemotaxis protein 850 50.00 0 817359..819188 - 609 15601620 - VCA0865 - hemagglutinin/protease 851 36.67 -1 819174..819413 + 79 15601621 - VCA0866 - hypothetical protein 852 42.97 0 819609..820262 - 217 15601622 - VCA0867 - outer membrane protein W 853 48.72 0 820452..820685 + 77 15601623 - VCA0868 - hypothetical protein 854 47.47 0 821082..821180 - 32 15601624 - VCA0869 - hypothetical protein 855 46.16 0 821216..822166 + 316 15601625 pbpG VCA0870 - D-alanyl-D-alanine endopeptidase 856 43.67 0 822401..823822 + 473 15601626 - VCA0871 - GntR family transcriptional regulator 857 47.27 0 823951..825543 + 530 15601627 - VCA0872 - cytochrome d ubiquinol oxidase, subunit I 858 44.24 0 825556..826692 + 378 15601628 - VCA0873 - cytochrome d ubiquinol oxidase, subunit II 859 35.78 -2 827514..827717 + 67 15601629 - VCA0874 - hypothetical protein 860 46.83 0 827934..829259 - 441 15601630 - VCA0875 - D-serine dehydratase 861 38.31 -1 829467..830411 + 314 15601631 - VCA0876 - DNA-binding transcriptional regulator DsdC 862 51.35 +1 830711..831787 + 358 15601632 - VCA0877 - hydrolase, putative 863 45.68 0 831895..832056 + 53 15601633 - VCA0878 - integrase-related protein 864 36.54 -1 832585..832740 - 51 15601634 - VCA0879 - hypothetical protein 865 40.94 -1 832685..833065 + 126 15601635 - VCA0880 - hypothetical protein 866 40.91 -1 833090..833485 + 131 15601636 - VCA0881 - hypothetical protein 867 41.31 0 833497..834561 + 354 15601637 - VCA0882 - hypothetical protein 868 43.60 0 834574..835683 + 369 15601638 - VCA0883 - hypothetical protein 869 39.92 -1 835734..836795 + 353 15601639 - VCA0884 - hypothetical protein 870 48.74 0 837892..838923 - 343 15601640 tdh VCA0885 - L-threonine 3-dehydrogenase 871 50.59 0 838926..840119 - 397 15601641 - VCA0886 - 2-amino-3-ketobutyrate coenzyme A ligase 872 44.23 0 841276..842037 + 253 15601642 - VCA0888 - LuxR family transcriptional regulator 873 50.27 0 842137..843075 + 312 15601643 - VCA0889 - LysR family transcriptional regulator 874 47.92 0 843069..843452 + 127 15601644 - VCA0890 - glyoxylase I family protein 875 51.03 +1 843530..844942 - 470 15601645 - VCA0891 - hypothetical protein 876 46.62 0 845054..845452 - 132 15601646 - VCA0892 - hypothetical protein 877 45.88 0 845558..846067 - 169 15601647 - VCA0893 - hypothetical protein 878 50.60 0 846018..846764 - 248 15601648 - VCA0894 - putative hydrolase 879 47.90 0 846932..849877 + 981 15601649 - VCA0895 - chemotactic transducer-related protein 880 50.46 0 850221..851726 + 501 15601650 - VCA0896 - glucose-6-phosphate 1-dehydrogenase 881 51.32 +1 851723..852439 + 238 15601651 - VCA0897 - 6-phosphogluconolactonase 882 50.59 0 852453..853901 + 482 15601652 - VCA0898 - 6-phosphogluconate dehydrogenase 883 42.75 0 854057..854194 + 45 15601653 - VCA0899 - hypothetical protein 884 47.32 0 854462..855376 + 304 15601654 - VCA0900 - hypothetical protein 885 50.32 0 855370..855999 + 209 15601655 - VCA0901 - hypothetical protein 886 44.32 0 856032..856868 - 278 15601656 - VCA0902 - hypothetical protein 887 52.82 +1 857004..858137 - 377 15601657 - VCA0903 - hypothetical protein 888 49.52 0 858156..859508 - 450 15601658 - VCA0904 - permease 889 47.28 0 859667..860806 - 379 15601659 - VCA0905 - hypothetical protein 890 46.46 0 860947..862683 - 578 15601660 - VCA0906 - methyl-accepting chemotaxis protein 891 47.08 0 862985..863515 - 176 15601661 - VCA0907 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.