version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 611 49.74 0 557117..558067 + 316 15601381 - VCA0623 - transaldolase B 612 52.86 +1 558116..560158 + 680 15601382 - VCA0624 - transketolase 613 47.52 0 560275..562629 - 784 15601383 - VCA0625 - TonB receptor-related protein 614 39.05 -1 562599..562703 + 34 15601384 - VCA0626 - hypothetical protein 615 50.88 +1 562843..563355 + 170 15601385 - VCA0627 - rRNA methylase, putative 616 32.41 -2 563793..565967 + 724 15601386 - VCA0628 - SecA-related protein 617 52.64 +1 566238..567278 - 346 15601387 - VCA0629 - hypothetical protein 618 51.23 +1 567291..568262 - 323 15601388 - VCA0630 - D-3-phosphoglycerate dehydrogenase-related protein 619 50.39 0 568278..568793 - 171 15601389 - VCA0631 - hypothetical protein 620 51.78 +1 568826..569275 - 149 15601390 - VCA0632 - MutT/nudix family protein 621 49.29 0 569315..569665 - 116 15601391 - VCA0633 - glpM protein 622 52.20 +1 569857..570582 + 241 15601392 - VCA0634 - hypothetical protein 623 51.38 +1 570592..571533 + 313 15601393 - VCA0635 - LysR family transcriptional regulator 624 49.48 0 571530..571820 - 96 15601394 - VCA0636 - hypothetical protein 625 49.69 0 571824..572477 - 217 15601395 - VCA0637 - dihydropteridine reductase 626 51.53 +1 572693..575896 - 1067 15601396 - VCA0638 - AcrB/AcrD/AcrF family transporter 627 52.34 +1 575853..576857 - 334 15601397 - VCA0639 - AcrA/AcrE family protein 628 47.53 0 576967..577431 - 154 15601398 - VCA0640 - hypothetical protein 629 51.19 +1 577436..577855 - 139 15601399 - VCA0641 - hypothetical protein 630 47.80 0 577872..578189 - 105 15601400 - VCA0642 - ArsR family transcriptional regulator 631 40.45 -1 578263..578529 + 88 15601401 - VCA0643 - hypothetical protein 632 50.47 0 578595..580298 + 567 15601402 - VCA0644 - NADH oxidase, putative 633 45.14 0 580391..580771 - 126 15601403 - VCA0645 - hypothetical protein 634 49.23 0 580887..582704 - 605 15601404 - VCA0646 - hemolysin, putative 635 47.87 0 582629..583075 - 148 15601405 - VCA0647 - hypothetical protein 636 50.07 0 583086..583832 - 248 15601406 - VCA0648 - hypothetical protein 637 50.09 0 583832..584374 - 180 15601407 - VCA0649 - hypothetical protein 638 51.45 +1 584463..585599 - 378 15601408 - VCA0650 - hypothetical protein 639 48.80 0 585596..586177 - 193 15601409 - VCA0651 - hypothetical protein 640 46.80 0 586449..586886 + 145 15601410 - VCA0652 - hypothetical protein 641 49.58 0 587052..588491 - 479 15601411 - VCA0653 - PTS system, sucrose-specific IIBC component 642 47.03 0 588792..589784 + 330 15601412 - VCA0654 - sucrose operon repressor ScrR, putative 643 50.58 0 589860..591506 + 548 15601413 - VCA0655 - sucrose-6-phosphate dehydrogenase 644 50.62 0 591628..592599 - 323 15601414 - VCA0656 - aminoimidazole riboside kinase 645 48.41 0 592946..594484 + 512 15601415 glpD VCA0657 - glycerol-3-phosphate dehydrogenase 646 50.03 0 594586..596196 - 536 15601416 - VCA0658 - methyl-accepting chemotaxis protein 647 49.04 0 596382..597005 - 207 15601417 - VCA0659 - protein F-related protein 648 34.15 -2 597006..597128 - 40 15601418 - VCA0660 - hypothetical protein 649 47.26 0 597218..597691 + 157 15601419 - VCA0661 - peptidyl-prolyl cis-trans isomerase-related protein 650 48.36 0 597772..598410 - 212 15601420 - VCA0662 - CbbY family protein 651 46.15 0 598557..600320 + 587 15601421 - VCA0663 - methyl-accepting chemotaxis protein 652 48.68 0 600261..600449 - 62 15601422 - VCA0664 - hypothetical protein 653 49.06 0 600714..602093 + 459 15601423 dcuC VCA0665 - C4-dicarboxylate transporter DcuC 654 48.99 0 602191..603621 - 476 15601424 - VCA0666 - L-serine dehydratase 1 655 42.09 0 603572..605113 - 513 15601425 - VCA0667 - sodium/solute symporter 656 37.04 -1 605152..605259 - 35 15601426 - VCA0668 - hypothetical protein 657 46.84 0 605452..606747 + 431 15601427 - VCA0669 - sugar transporter family protein 658 43.59 0 606706..606861 - 51 15601428 - VCA0670 - hypothetical protein 659 44.84 0 606844..607860 + 338 15601429 - VCA0671 - hypothetical protein 660 34.23 -2 607960..608070 + 36 15601430 - VCA0672 - hypothetical protein 661 43.70 0 608100..609131 + 343 15601431 - VCA0673 - LacI family transcription regulator 662 47.60 0 609797..611548 - 583 15601432 - VCA0675 - nitrate/nitrite sensor protein NarQ 663 53.65 +1 611706..612212 + 168 15601433 - VCA0676 - iron-sulfur cluster-binding protein NapF 664 45.32 0 612218..612559 + 113 15601434 - VCA0677 - napD protein 665 51.49 +1 612556..615045 + 829 15601435 - VCA0678 - nitrate reductase 666 50.58 0 615052..615567 + 171 15601436 - VCA0679 - periplasmic nitrate reductase, cytochrome c-type protein 667 50.69 0 615585..616160 + 191 15601437 - VCA0680 - periplasmic nitrate reductase, cytochrome c-type protein 668 47.76 0 616344..617639 - 431 15601438 - VCA0681 - hypothetical protein 669 47.05 0 617798..618424 + 208 15601439 - VCA0682 - transcriptional regulator UhpA 670 48.80 0 618427..620010 + 527 15601440 - VCA0683 - sensor protein UhpB 671 49.66 0 620078..621388 + 436 15601441 - VCA0684 - regulatory protein UhpC 672 48.50 0 621501..622535 + 344 15601442 - VCA0685 - iron(III) ABC transporter, periplasmic iron-compound-binding protein 673 49.55 0 622639..624741 + 700 15601443 - VCA0686 - iron(III) ABC transporter, permease protein 674 47.16 0 624753..625808 + 351 15601444 fbpC VCA0687 - ferric transporter ATP-binding subunit 675 46.85 0 625894..627669 - 591 15601445 - VCA0688 - polyhydroxyalkanoic acid synthase 676 41.09 -1 627727..628074 - 115 15601446 - VCA0689 - hypothetical protein 677 49.75 0 628104..629309 - 401 15601447 - VCA0690 - acetyl-CoA acetyltransferase 678 46.69 0 629322..630062 - 246 15601448 - VCA0691 - acetoacetyl-CoA reductase 679 47.96 0 631637..633475 - 612 15601449 secD VCA0693 - preprotein translocase subunit SecD 680 49.78 0 633547..634002 - 151 15601450 - VCA0694 - hypothetical protein 681 46.58 0 634079..634750 - 223 15601451 - VCA0695 - hypothetical protein 682 31.53 -2 634785..634895 - 36 15601452 - VCA0696 - hypothetical protein 683 45.26 0 635108..637036 + 642 15601453 - VCA0697 - sensory box/GGDEF family protein 684 43.01 0 637033..637125 + 30 15601454 - VCA0698 - hypothetical protein 685 47.22 0 637339..638562 + 407 15601455 glgC VCA0699 - glucose-1-phosphate adenylyltransferase 686 51.08 +1 638828..641983 - 1051 15601456 - VCA0700 - chitodextrinase 687 34.09 -2 642017..642148 - 43 15601457 - VCA0701 - hypothetical protein 688 49.09 0 642655..643803 + 382 15601458 - VCA0702 - iron-containing alcohol dehydrogenase 689 48.70 0 643882..644571 + 229 15601459 - VCA0703 - hypothetical protein 690 49.77 0 644568..645887 - 439 15601460 - VCA0704 - phosphoglycerate transport system transcriptional regulatory protein PgtA 691 48.78 0 645805..648174 - 789 15601461 - VCA0705 - phosphoglycerate transport regulatory protein PgtB, putative 692 49.43 0 648171..649493 - 440 15601462 - VCA0706 - phosphoglycerate transport regulatory protein PgtC, putative 693 50.51 0 649740..651119 + 459 15601463 - VCA0707 - regulatory protein UhpC, putative 694 51.68 +1 651241..652701 + 486 15601464 - VCA0708 - pyruvate kinase 695 50.87 +1 652820..655882 - 1020 15601465 - VCA0709 - sensor protein TorS 696 50.95 +1 655805..656854 + 349 15601466 - VCA0710 - periplasmic sensory protein associated with the TorRS two-component regulatory system 697 49.12 0 656909..657364 + 151 15601467 mgsA VCA0711 - methylglyoxal synthase 698 49.60 0 657433..658053 - 206 15601468 - VCA0712 - pyrazinamidase/nicotinamidase 699 45.30 0 658175..658291 - 38 15601469 - VCA0713 - hypothetical protein 700 47.06 0 658358..658714 + 118 15601470 - VCA0714 - diacylglycerol kinase 701 40.25 -1 658854..659171 + 105 15601471 - VCA0715 - hypothetical protein 702 46.00 0 659164..659700 + 178 15601472 - VCA0716 - hypothetical protein 703 48.06 0 659756..661819 - 687 161582042 helD VCA0717 - DNA helicase IV 704 51.01 +1 662006..664183 + 725 15601474 - VCA0718 - hypothetical protein 705 48.63 0 664193..665140 - 315 15601475 - VCA0719 - sensor histide kinase 706 46.18 0 665137..665712 - 191 15601476 - VCA0720 - guanylate cyclase-related protein 707 48.08 0 665840..666151 + 103 15601477 - VCA0721 - hypothetical protein 708 50.17 0 666208..666498 + 96 15601478 - VCA0722 - hypothetical protein 709 54.54 +1 666528..667838 + 436 15601479 - VCA0723 - 3-hydroxy-3-methylglutaryl CoA reductase 710 54.04 +1 667937..669037 - 366 15601480 modC VCA0724 - molybdate transporter ATP-binding protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0