version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 564 48.09 0 513839..514726 - 295 15601334 - VCA0575 - LysR family transcriptional regulator 565 37.77 -1 514944..517040 + 698 15601335 - VCA0576 - heme transport protein HutA 566 38.89 -1 517156..517263 + 35 15601336 - VCA0577 - hypothetical protein 567 48.00 0 517364..519061 - 565 15601337 - VCA0578 - hypothetical protein 568 49.57 0 519142..519375 - 77 15601338 - VCA0579 - hypothetical protein 569 46.09 0 519376..519963 - 195 15601339 - VCA0580 - hypothetical protein 570 48.36 0 519996..520787 + 263 15601340 - VCA0581 - hypothetical protein 571 44.10 0 520899..521381 - 160 15601341 - VCA0582 - hypothetical protein 572 47.58 0 521497..522282 + 261 15601342 - VCA0583 - hypothetical protein 573 48.28 0 522368..523036 - 222 15601343 - VCA0584 - glutathione S-transferase, putative 574 45.10 0 523048..523659 - 203 15601344 - VCA0585 - glutathione S-transferase, putative 575 47.24 0 523761..524357 + 198 15601345 - VCA0586 - hypothetical protein 576 48.85 0 524354..524746 + 130 15601346 - VCA0587 - hypothetical protein 577 50.60 0 524830..526422 - 530 15601347 - VCA0588 - peptide ABC transporter, ATP-binding protein, putative 578 48.73 0 526419..527477 - 352 15601348 - VCA0589 - peptide ABC transporter, permease protein, putative 579 47.37 0 527474..528556 - 360 15601349 - VCA0590 - peptide ABC transporter, permease protein, putative 580 48.53 0 528565..530400 - 611 15601350 - VCA0591 - peptide ABC transporter, periplasmic peptide-binding protein, putative 581 47.24 0 530597..531157 - 186 15601351 - VCA0592 - MutT/nudix family protein 582 45.87 0 531211..532143 - 310 15601352 - VCA0593 - hypothetical protein 583 46.81 0 532353..532634 + 93 15601353 - VCA0594 - hemolysin 584 48.22 0 532716..533669 - 317 15601354 - VCA0595 - hypothetical protein 585 49.29 0 535080..535361 + 93 15601355 - VCA0597 - hypothetical protein 586 47.97 0 535373..535495 - 40 15601356 - VCA0598 - hypothetical protein 587 50.11 0 535461..536366 - 301 15601357 - VCA0599 - hypothetical protein 588 49.93 0 536432..537136 - 234 15601358 - VCA0600 - repressor protein PhnR, putative 589 51.43 +1 537161..538939 - 592 15601359 - VCA0601 - ABC transporter, permease protein 590 48.76 0 538872..540083 - 403 15601360 - VCA0602 - ABC transporter, ATP-binding protein 591 48.53 0 540239..541258 - 339 15601361 - VCA0603 - ABC transporter, periplasmic substrate-binding protein 592 50.45 0 541490..542593 + 367 15601362 - VCA0604 - 2-aminoethylphosphonate--pyruvate transaminase 593 50.21 0 542611..544008 + 465 15601363 - VCA0605 - 4-aminobutyrate aminotransferase 594 52.82 +1 544015..544830 + 271 15601364 - VCA0606 - phosphonoacetaldehyde hydrolase 595 48.77 0 544995..545402 + 135 15601365 - VCA0607 - nucleoside diphosphate kinase regulator 596 46.96 0 545462..546136 - 224 15601366 - VCA0608 - nucleotidase 597 49.73 0 546331..546513 + 60 15601367 - VCA0609 - hypothetical protein 598 51.15 +1 546518..547168 + 216 15601368 - VCA0610 - isoprenoid biosynthesis protein 599 42.75 0 547305..547442 + 45 15601369 - VCA0611 - hypothetical protein 600 44.28 0 547439..547849 + 136 15601370 mscL VCA0612 - large-conductance mechanosensitive channel 601 41.23 0 547882..547995 + 37 15601371 - VCA0613 - hypothetical protein 602 51.89 +1 548029..549828 + 599 15601372 - VCA0614 - formate--tetrahydrofolate ligase 603 47.09 0 549956..551140 + 394 15601373 - VCA0615 - bifunctional methionine sulfoxide reductase A/B protein 604 50.36 0 551233..551925 - 230 15601374 folE VCA0616 - GTP cyclohydrolase I 605 53.21 +1 551966..553273 + 435 15601375 - VCA0617 - molybdopterin biosynthesis MoeA protein 606 51.90 +1 553276..554040 + 254 15601376 - VCA0618 - molybdopterin biosynthesis protein MoeB 607 43.90 0 554224..554592 + 122 15601377 - VCA0619 - hypothetical protein 608 51.14 +1 554614..555444 + 276 15601378 - VCA0620 - thiosulfate sulfurtransferase SseA, putative 609 51.00 +1 555529..556524 - 331 15601379 - VCA0621 - SorC family transcriptional regulator 610 52.25 +1 556523..556633 + 36 15601380 - VCA0622 - hypothetical protein 611 49.74 0 557117..558067 + 316 15601381 - VCA0623 - transaldolase B 612 52.86 +1 558116..560158 + 680 15601382 - VCA0624 - transketolase 613 47.52 0 560275..562629 - 784 15601383 - VCA0625 - TonB receptor-related protein 614 39.05 -1 562599..562703 + 34 15601384 - VCA0626 - hypothetical protein 615 50.88 +1 562843..563355 + 170 15601385 - VCA0627 - rRNA methylase, putative 616 32.41 -2 563793..565967 + 724 15601386 - VCA0628 - SecA-related protein 617 52.64 +1 566238..567278 - 346 15601387 - VCA0629 - hypothetical protein 618 51.23 +1 567291..568262 - 323 15601388 - VCA0630 - D-3-phosphoglycerate dehydrogenase-related protein 619 50.39 0 568278..568793 - 171 15601389 - VCA0631 - hypothetical protein 620 51.78 +1 568826..569275 - 149 15601390 - VCA0632 - MutT/nudix family protein 621 49.29 0 569315..569665 - 116 15601391 - VCA0633 - glpM protein 622 52.20 +1 569857..570582 + 241 15601392 - VCA0634 - hypothetical protein 623 51.38 +1 570592..571533 + 313 15601393 - VCA0635 - LysR family transcriptional regulator 624 49.48 0 571530..571820 - 96 15601394 - VCA0636 - hypothetical protein 625 49.69 0 571824..572477 - 217 15601395 - VCA0637 - dihydropteridine reductase 626 51.53 +1 572693..575896 - 1067 15601396 - VCA0638 - AcrB/AcrD/AcrF family transporter 627 52.34 +1 575853..576857 - 334 15601397 - VCA0639 - AcrA/AcrE family protein 628 47.53 0 576967..577431 - 154 15601398 - VCA0640 - hypothetical protein 629 51.19 +1 577436..577855 - 139 15601399 - VCA0641 - hypothetical protein 630 47.80 0 577872..578189 - 105 15601400 - VCA0642 - ArsR family transcriptional regulator 631 40.45 -1 578263..578529 + 88 15601401 - VCA0643 - hypothetical protein 632 50.47 0 578595..580298 + 567 15601402 - VCA0644 - NADH oxidase, putative 633 45.14 0 580391..580771 - 126 15601403 - VCA0645 - hypothetical protein 634 49.23 0 580887..582704 - 605 15601404 - VCA0646 - hemolysin, putative 635 47.87 0 582629..583075 - 148 15601405 - VCA0647 - hypothetical protein 636 50.07 0 583086..583832 - 248 15601406 - VCA0648 - hypothetical protein 637 50.09 0 583832..584374 - 180 15601407 - VCA0649 - hypothetical protein 638 51.45 +1 584463..585599 - 378 15601408 - VCA0650 - hypothetical protein 639 48.80 0 585596..586177 - 193 15601409 - VCA0651 - hypothetical protein 640 46.80 0 586449..586886 + 145 15601410 - VCA0652 - hypothetical protein 641 49.58 0 587052..588491 - 479 15601411 - VCA0653 - PTS system, sucrose-specific IIBC component 642 47.03 0 588792..589784 + 330 15601412 - VCA0654 - sucrose operon repressor ScrR, putative 643 50.58 0 589860..591506 + 548 15601413 - VCA0655 - sucrose-6-phosphate dehydrogenase 644 50.62 0 591628..592599 - 323 15601414 - VCA0656 - aminoimidazole riboside kinase 645 48.41 0 592946..594484 + 512 15601415 glpD VCA0657 - glycerol-3-phosphate dehydrogenase 646 50.03 0 594586..596196 - 536 15601416 - VCA0658 - methyl-accepting chemotaxis protein 647 49.04 0 596382..597005 - 207 15601417 - VCA0659 - protein F-related protein 648 34.15 -2 597006..597128 - 40 15601418 - VCA0660 - hypothetical protein 649 47.26 0 597218..597691 + 157 15601419 - VCA0661 - peptidyl-prolyl cis-trans isomerase-related protein 650 48.36 0 597772..598410 - 212 15601420 - VCA0662 - CbbY family protein 651 46.15 0 598557..600320 + 587 15601421 - VCA0663 - methyl-accepting chemotaxis protein 652 48.68 0 600261..600449 - 62 15601422 - VCA0664 - hypothetical protein 653 49.06 0 600714..602093 + 459 15601423 dcuC VCA0665 - C4-dicarboxylate transporter DcuC 654 48.99 0 602191..603621 - 476 15601424 - VCA0666 - L-serine dehydratase 1 655 42.09 0 603572..605113 - 513 15601425 - VCA0667 - sodium/solute symporter 656 37.04 -1 605152..605259 - 35 15601426 - VCA0668 - hypothetical protein 657 46.84 0 605452..606747 + 431 15601427 - VCA0669 - sugar transporter family protein 658 43.59 0 606706..606861 - 51 15601428 - VCA0670 - hypothetical protein 659 44.84 0 606844..607860 + 338 15601429 - VCA0671 - hypothetical protein 660 34.23 -2 607960..608070 + 36 15601430 - VCA0672 - hypothetical protein 661 43.70 0 608100..609131 + 343 15601431 - VCA0673 - LacI family transcription regulator 662 47.60 0 609797..611548 - 583 15601432 - VCA0675 - nitrate/nitrite sensor protein NarQ 663 53.65 +1 611706..612212 + 168 15601433 - VCA0676 - iron-sulfur cluster-binding protein NapF 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.