version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 530 33.33 -2 478160..478255 + 31 15601300 - VCA0541 - hypothetical protein 531 46.91 0 478273..479178 + 301 15601301 - VCA0542 - LysR family transcriptional regulator 532 47.37 0 479340..479852 + 170 15601302 - VCA0543 - hypothetical protein 533 49.07 0 480084..481748 - 554 15601303 - VCA0544 - hypothetical protein 534 48.54 0 481978..483720 + 580 15601304 - VCA0545 - 5`-nucleotidase, putative 535 47.34 0 484280..485236 + 318 15601305 - VCA0546 - hypothetical protein 536 40.74 -1 485540..485728 + 62 15601306 - VCA0547 - hypothetical protein 537 36.00 -2 485757..485906 + 49 15601307 - VCA0548 - hypothetical protein 538 47.57 0 485878..486453 - 191 15601308 - VCA0549 - phnA protein 539 46.72 0 486637..487719 + 360 15601309 - VCA0550 - hypothetical protein 540 48.92 0 487773..488003 - 76 15601310 - VCA0551 - hypothetical protein 541 47.59 0 488171..490471 - 766 15601311 - VCA0552 - fatty acid cis/trans isomerase 542 47.13 0 490560..490733 - 57 15601312 - VCA0553 - hypothetical protein 543 49.64 0 490884..492116 - 410 15601313 - VCA0554 - oxalate/formate antiporter, putative 544 33.33 -2 492174..492293 - 39 15601314 - VCA0555 - hypothetical protein 545 43.96 0 492527..493081 + 184 15601315 - VCA0556 - hypothetical protein 546 43.69 0 493351..494760 + 469 15601316 - VCA0557 - GGDEF family protein 547 48.76 0 495055..496623 + 522 15601317 - VCA0558 - gamma-glutamyltranspeptidase, putative 548 44.21 0 496698..497681 + 327 15601318 - VCA0559 - hypothetical protein 549 44.79 0 497678..498916 - 412 15601319 - VCA0560 - GGDEF family protein 550 44.27 0 499272..499646 + 124 15601320 - VCA0561 - hypothetical protein 551 42.65 0 499656..499934 + 92 15601321 - VCA0562 - hypothetical protein 552 48.28 0 500227..501765 + 512 15601322 pntA VCA0563 - NAD(P) transhydrogenase subunit alpha 553 47.13 0 501777..503153 + 458 15601323 pntB VCA0564 - pyridine nucleotide transhydrogenase 554 44.73 0 503254..504753 + 499 15601324 - VCA0565 - sensor histidine kinase 555 45.12 0 504647..505384 + 245 15601325 - VCA0566 - transcriptional regulator 556 41.64 0 505381..506271 + 296 15601326 - VCA0567 - hypothetical protein 557 43.53 0 506332..507498 + 388 15601327 - VCA0568 - hypothetical protein 558 44.44 0 507539..507700 + 53 15601328 - VCA0569 - hypothetical protein 559 41.99 0 508285..508596 - 103 15601329 - VCA0570 - translation initiation factor Sui1 560 41.67 0 508604..508987 - 127 15601330 - VCA0571 - hypothetical protein 561 42.49 0 509159..510163 - 334 15601331 ddl VCA0572 - D-alanyl-alanine synthetase A 562 45.75 0 510314..510901 - 195 15601332 - VCA0573 - DamX-related protein 563 46.20 0 511108..513789 + 893 15601333 - VCA0574 - hypothetical protein 564 48.09 0 513839..514726 - 295 15601334 - VCA0575 - LysR family transcriptional regulator 565 37.77 -1 514944..517040 + 698 15601335 - VCA0576 - heme transport protein HutA 566 38.89 -1 517156..517263 + 35 15601336 - VCA0577 - hypothetical protein 567 48.00 0 517364..519061 - 565 15601337 - VCA0578 - hypothetical protein 568 49.57 0 519142..519375 - 77 15601338 - VCA0579 - hypothetical protein 569 46.09 0 519376..519963 - 195 15601339 - VCA0580 - hypothetical protein 570 48.36 0 519996..520787 + 263 15601340 - VCA0581 - hypothetical protein 571 44.10 0 520899..521381 - 160 15601341 - VCA0582 - hypothetical protein 572 47.58 0 521497..522282 + 261 15601342 - VCA0583 - hypothetical protein 573 48.28 0 522368..523036 - 222 15601343 - VCA0584 - glutathione S-transferase, putative 574 45.10 0 523048..523659 - 203 15601344 - VCA0585 - glutathione S-transferase, putative 575 47.24 0 523761..524357 + 198 15601345 - VCA0586 - hypothetical protein 576 48.85 0 524354..524746 + 130 15601346 - VCA0587 - hypothetical protein 577 50.60 0 524830..526422 - 530 15601347 - VCA0588 - peptide ABC transporter, ATP-binding protein, putative 578 48.73 0 526419..527477 - 352 15601348 - VCA0589 - peptide ABC transporter, permease protein, putative 579 47.37 0 527474..528556 - 360 15601349 - VCA0590 - peptide ABC transporter, permease protein, putative 580 48.53 0 528565..530400 - 611 15601350 - VCA0591 - peptide ABC transporter, periplasmic peptide-binding protein, putative 581 47.24 0 530597..531157 - 186 15601351 - VCA0592 - MutT/nudix family protein 582 45.87 0 531211..532143 - 310 15601352 - VCA0593 - hypothetical protein 583 46.81 0 532353..532634 + 93 15601353 - VCA0594 - hemolysin 584 48.22 0 532716..533669 - 317 15601354 - VCA0595 - hypothetical protein 585 49.29 0 535080..535361 + 93 15601355 - VCA0597 - hypothetical protein 586 47.97 0 535373..535495 - 40 15601356 - VCA0598 - hypothetical protein 587 50.11 0 535461..536366 - 301 15601357 - VCA0599 - hypothetical protein 588 49.93 0 536432..537136 - 234 15601358 - VCA0600 - repressor protein PhnR, putative 589 51.43 +1 537161..538939 - 592 15601359 - VCA0601 - ABC transporter, permease protein 590 48.76 0 538872..540083 - 403 15601360 - VCA0602 - ABC transporter, ATP-binding protein 591 48.53 0 540239..541258 - 339 15601361 - VCA0603 - ABC transporter, periplasmic substrate-binding protein 592 50.45 0 541490..542593 + 367 15601362 - VCA0604 - 2-aminoethylphosphonate--pyruvate transaminase 593 50.21 0 542611..544008 + 465 15601363 - VCA0605 - 4-aminobutyrate aminotransferase 594 52.82 +1 544015..544830 + 271 15601364 - VCA0606 - phosphonoacetaldehyde hydrolase 595 48.77 0 544995..545402 + 135 15601365 - VCA0607 - nucleoside diphosphate kinase regulator 596 46.96 0 545462..546136 - 224 15601366 - VCA0608 - nucleotidase 597 49.73 0 546331..546513 + 60 15601367 - VCA0609 - hypothetical protein 598 51.15 +1 546518..547168 + 216 15601368 - VCA0610 - isoprenoid biosynthesis protein 599 42.75 0 547305..547442 + 45 15601369 - VCA0611 - hypothetical protein 600 44.28 0 547439..547849 + 136 15601370 mscL VCA0612 - large-conductance mechanosensitive channel 601 41.23 0 547882..547995 + 37 15601371 - VCA0613 - hypothetical protein 602 51.89 +1 548029..549828 + 599 15601372 - VCA0614 - formate--tetrahydrofolate ligase 603 47.09 0 549956..551140 + 394 15601373 - VCA0615 - bifunctional methionine sulfoxide reductase A/B protein 604 50.36 0 551233..551925 - 230 15601374 folE VCA0616 - GTP cyclohydrolase I 605 53.21 +1 551966..553273 + 435 15601375 - VCA0617 - molybdopterin biosynthesis MoeA protein 606 51.90 +1 553276..554040 + 254 15601376 - VCA0618 - molybdopterin biosynthesis protein MoeB 607 43.90 0 554224..554592 + 122 15601377 - VCA0619 - hypothetical protein 608 51.14 +1 554614..555444 + 276 15601378 - VCA0620 - thiosulfate sulfurtransferase SseA, putative 609 51.00 +1 555529..556524 - 331 15601379 - VCA0621 - SorC family transcriptional regulator 610 52.25 +1 556523..556633 + 36 15601380 - VCA0622 - hypothetical protein 611 49.74 0 557117..558067 + 316 15601381 - VCA0623 - transaldolase B 612 52.86 +1 558116..560158 + 680 15601382 - VCA0624 - transketolase 613 47.52 0 560275..562629 - 784 15601383 - VCA0625 - TonB receptor-related protein 614 39.05 -1 562599..562703 + 34 15601384 - VCA0626 - hypothetical protein 615 50.88 +1 562843..563355 + 170 15601385 - VCA0627 - rRNA methylase, putative 616 32.41 -2 563793..565967 + 724 15601386 - VCA0628 - SecA-related protein 617 52.64 +1 566238..567278 - 346 15601387 - VCA0629 - hypothetical protein 618 51.23 +1 567291..568262 - 323 15601388 - VCA0630 - D-3-phosphoglycerate dehydrogenase-related protein 619 50.39 0 568278..568793 - 171 15601389 - VCA0631 - hypothetical protein 620 51.78 +1 568826..569275 - 149 15601390 - VCA0632 - MutT/nudix family protein 621 49.29 0 569315..569665 - 116 15601391 - VCA0633 - glpM protein 622 52.20 +1 569857..570582 + 241 15601392 - VCA0634 - hypothetical protein 623 51.38 +1 570592..571533 + 313 15601393 - VCA0635 - LysR family transcriptional regulator 624 49.48 0 571530..571820 - 96 15601394 - VCA0636 - hypothetical protein 625 49.69 0 571824..572477 - 217 15601395 - VCA0637 - dihydropteridine reductase 626 51.53 +1 572693..575896 - 1067 15601396 - VCA0638 - AcrB/AcrD/AcrF family transporter 627 52.34 +1 575853..576857 - 334 15601397 - VCA0639 - AcrA/AcrE family protein 628 47.53 0 576967..577431 - 154 15601398 - VCA0640 - hypothetical protein 629 51.19 +1 577436..577855 - 139 15601399 - VCA0641 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.