version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 7 51.05 +1 5573..6520 + 315 15600778 - VCA0007 - 3-hydroxyisobutyrate dehydrogenase, putative 8 48.38 0 6624..8285 - 553 15600779 - VCA0008 - methyl-accepting chemotaxis protein 9 42.56 0 8288..8482 + 64 15600780 - VCA0009 - hypothetical protein 10 44.98 0 8482..8919 + 145 15600781 - VCA0010 - hypothetical protein 11 50.58 0 8986..11751 - 921 15600782 - VCA0011 - transcriptional regulator MalT 12 35.48 -2 11903..11995 + 30 15600783 - VCA0012 - hypothetical protein 13 52.49 +1 12271..14724 + 817 15600784 - VCA0013 - maltodextrin phosphorylase 14 52.09 +1 14810..16990 + 726 15600785 malQ VCA0014 - 4-alpha-glucanotransferase 15 52.38 +1 17196..17426 + 76 15600786 - VCA0015 - hypothetical protein 16 50.57 0 17386..19386 + 666 15600787 - VCA0016 - glycogen branching enzyme 17 49.13 0 19781..20299 + 172 15600788 - VCA0017 - hcp protein 18 53.14 +1 20427..22511 + 694 15600789 - VCA0018 - vgrG protein 19 46.73 0 22511..23398 + 295 15600790 - VCA0019 - hypothetical protein 20 46.38 0 23395..26652 + 1085 15600791 - VCA0020 - hypothetical protein 21 41.43 0 26653..27381 + 242 15600792 - VCA0021 - hypothetical protein 22 50.00 0 27484..27885 + 133 15600793 - VCA0022 - glutathione S-transfersae-related protein 23 46.88 0 28058..29098 - 346 15600794 - VCA0023 - hypothetical protein 24 47.53 0 29214..30206 - 330 15600795 - VCA0024 - hypothetical protein 25 49.46 0 30484..31872 + 462 15600796 - VCA0025 - NadC family protein 26 45.60 0 31968..32603 - 211 15600797 - VCA0026 - hypothetical protein 27 49.53 0 33035..35584 + 849 15600798 - VCA0027 - chitinase 28 45.10 0 35606..35860 - 84 15600799 - VCA0028 - hypothetical protein 29 47.89 0 35950..36684 + 244 15600800 - VCA0029 - transcriptional regulator, putative 30 46.14 0 36685..37527 + 280 15600801 - VCA0030 - hypothetical protein 31 45.53 0 37648..39213 - 521 15600802 - VCA0031 - methyl-accepting chemotaxis protein 32 44.21 0 39311..39871 - 186 15600803 - VCA0032 - hypothetical protein 33 48.53 0 40280..42154 + 624 15600804 - VCA0033 - hypothetical protein 34 46.85 0 42214..43086 - 290 15600805 - VCA0034 - hypothetical protein 35 47.52 0 43202..44026 + 274 15600806 - VCA0035 - phosphatidylglycerophosphatase B, putative 36 48.85 0 44080..45297 - 405 15600807 - VCA0036 - serine/threonine transporter SstT 37 47.24 0 45638..46090 - 150 15600808 - VCA0037 - hypothetical protein 38 45.70 0 46104..46685 - 193 15600809 - VCA0038 - Sco1-related protein 39 49.41 0 46682..47104 - 140 15600810 - VCA0039 - hypothetical protein 40 48.11 0 47303..48229 - 308 15600811 - VCA0040 - hypothetical protein 41 46.13 0 48768..49994 + 408 15600812 - VCA0041 - sodium/glutamate symporter 42 46.64 0 50073..50831 - 252 15600813 - VCA0042 - hypothetical protein 43 48.42 0 50963..51247 + 94 15600814 - VCA0043 - hypothetical protein 44 48.95 0 51480..53624 + 714 15600815 - VCA0044 - hypothetical protein 45 48.44 0 53551..54735 + 394 15600816 - VCA0045 - protease-related protein 46 50.41 0 54727..54849 - 40 15600817 - VCA0046 - hypothetical protein 47 49.51 0 54930..56060 - 376 15600818 - VCA0047 - hypothetical protein 48 43.33 0 56060..56449 - 129 15600819 - VCA0048 - hypothetical protein 49 47.05 0 56584..57465 - 293 15600820 - VCA0049 - GGDEF family protein 50 49.38 0 57462..58190 - 242 15600821 - VCA0050 - hypothetical protein 51 48.69 0 58144..59667 - 507 15600822 - VCA0051 - hypothetical protein 52 49.84 0 59786..61348 - 520 15600823 - VCA0052 - hypothetical protein 53 47.68 0 61320..62030 - 236 161582046 - VCA0053 - purine nucleoside phosphorylase 54 35.56 -2 62116..62295 - 59 15600825 - VCA0054 - hypothetical protein 55 47.88 0 62337..63305 + 322 15600826 - VCA0055 - hypothetical protein 56 51.00 +1 63295..64092 + 265 15600827 - VCA0056 - MerR family transcriptional regulator 57 50.78 +1 64102..65511 + 469 15600828 - VCA0057 - deoxyribodipyrimidine photolyase 58 47.88 0 65520..66440 + 306 15600829 - VCA0058 - hypothetical protein 59 45.00 0 66526..66885 - 119 15600830 - VCA0059 - major outer membrane lipoprotein 60 44.07 0 67082..67258 + 58 15600831 - VCA0060 - hypothetical protein 61 47.98 0 67304..68662 + 452 15600832 - VCA0061 - DEAD-box ATP dependent DNA helicase 62 42.34 0 68659..68769 - 36 15600833 - VCA0062 - hypothetical protein 63 51.05 +1 68875..70872 + 665 15600834 - VCA0063 - protease II 64 50.56 0 70872..73013 + 713 15600835 - VCA0064 - TonB system receptor, putative 65 50.33 0 73023..75329 + 768 15600836 - VCA0065 - hypothetical protein 66 50.59 0 75326..76768 + 480 15600837 - VCA0066 - hypothetical protein 67 52.41 +1 76765..77325 + 186 15600838 - VCA0067 - hypothetical protein 68 48.48 0 77459..79102 - 547 15600839 - VCA0068 - methyl-accepting chemotaxis protein 69 38.38 -1 79249..79347 + 32 15600840 - VCA0069 - hypothetical protein 70 46.44 0 79395..80294 + 299 15600841 - VCA0070 - phosphate ABC transporter, periplasmic phosphate-binding protein 71 50.20 0 80309..81292 + 327 15600842 - VCA0071 - phosphate ABC transporter, permease protein 72 48.16 0 81292..82161 + 289 15600843 - VCA0072 - phosphate ABC transporter, permease protein 73 47.62 0 82190..82945 + 251 15600844 - VCA0073 - phosphate ABC transporter, ATP-binding protein 74 45.14 0 82992..84092 - 366 15600845 - VCA0074 - GGDEF family protein 75 41.88 0 84089..84556 - 155 15600846 - VCA0075 - hypothetical protein 76 48.95 0 84847..86223 - 458 15600847 - VCA0076 - hypothetical protein 77 49.58 0 86658..88319 - 553 15600848 - VCA0077 - sulfate permease family protein 78 40.84 -1 88624..88956 + 110 15600849 - VCA0078 - hypothetical protein 79 47.80 0 89148..90440 + 430 15600850 - VCA0079 - hypothetical protein 80 42.65 0 90558..92381 - 607 15600851 - VCA0080 - GGDEF family protein 81 36.19 -2 92442..92546 + 34 15600852 - VCA0081 - hypothetical protein 82 48.87 0 92604..93491 - 295 15600853 - VCA0082 - LysR family transcriptional regulator 83 48.84 0 93581..94792 + 403 15600854 - VCA0083 - multidrug resistance protein D 84 47.43 0 94834..95280 - 148 15600855 - VCA0084 - soxR protein 85 46.63 0 95459..96661 + 400 15600856 - VCA0085 - hypothetical protein 86 45.67 0 96762..97142 + 126 15600857 - VCA0086 - hypothetical protein 87 38.18 -1 97216..97380 + 54 15600858 - VCA0087 - hypothetical protein 88 49.41 0 97546..98820 - 424 15600859 - VCA0088 - proton/glutamate symporter 89 37.98 -1 98848..98976 + 42 15600860 - VCA0089 - hypothetical protein 90 51.34 +1 99076..99969 - 297 15600861 - VCA0090 - hypothetical protein 91 46.13 0 100199..100495 + 98 15600862 - VCA0091 - hypothetical protein 92 45.40 0 100666..101295 - 209 15600863 - VCA0092 - hypothetical protein 93 41.38 0 101395..101568 + 57 15600864 - VCA0093 - hypothetical protein 94 42.02 0 101796..102152 + 118 15600865 - VCA0094 - hypothetical protein 95 47.07 0 102421..103119 + 232 15600866 - VCA0095 - hypothetical protein 96 46.41 0 103162..104385 + 407 15600867 - VCA0096 - hypothetical protein 97 49.09 0 104398..105114 - 238 15600868 - VCA0097 - hypothetical protein 98 47.78 0 105513..106820 + 435 15600869 - VCA0098 - nicotinate phosphoribosyltransferase 99 49.76 0 106851..107891 + 346 15600870 - VCA0099 - Gfo/Idh/MocA family oxidoreductase 100 49.19 0 107928..108299 - 123 15600871 - VCA0100 - phage shock protein E 101 44.51 0 108299..109855 - 518 15600872 - VCA0101 - hypothetical protein 102 48.33 0 110031..110690 - 219 15600873 - VCA0102 - CbbY family protein 103 51.04 +1 110871..112649 + 592 15600874 - VCA0103 - sulfate permease family protein 104 47.45 0 112691..113356 - 221 15600875 - VCA0104 - ribosomal large subunit pseudouridine synthase A 105 54.74 +1 115142..115426 + 94 15600876 - VCA0105 - hypothetical protein 106 46.00 0 115341..116414 + 357 15600877 - VCA0106 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.