version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 465 40.12 -1 418092..418784 + 230 15601235 - VCA0474 - acetyltransferase, putative 466 41.04 -1 418784..419185 + 133 15601236 - VCA0475 - doc protein 467 40.82 -1 419373..419786 + 137 15601237 - VCA0476 - hypothetical protein 468 41.03 -1 419979..420251 + 90 15601238 - VCA0477 - hypothetical protein 469 42.96 0 420238..420528 + 96 15601239 - VCA0478 - hypothetical protein 470 39.25 -1 420656..421111 + 151 15601240 - VCA0479 - acetyltransferase, putative 471 43.14 0 421433..421585 + 50 15601241 - VCA0480 - hypothetical protein 472 43.37 0 421787..422284 - 165 15601242 - VCA0481 - hypothetical protein 473 42.49 0 422281..422553 - 90 15601243 - VCA0482 - hypothetical protein 474 38.12 -1 422784..423452 + 222 15601244 - VCA0483 - hypothetical protein 475 34.38 -2 423604..423891 + 95 15601245 - VCA0484 - hypothetical protein 476 39.25 -1 424032..424403 + 123 15601246 - VCA0485 - mazG-related protein 477 42.72 0 424470..424895 + 141 15601247 - VCA0486 - hypothetical protein 478 42.13 0 424892..425425 + 177 15601248 - VCA0487 - hypothetical protein 479 42.64 0 425627..425884 + 85 15601249 - VCA0488 - hypothetical protein 480 43.89 0 425872..426174 + 100 15601250 - VCA0489 - hypothetical protein 481 40.53 -1 426312..427325 + 337 15601251 - VCA0490 - GDXG family lipase 482 38.19 -1 427398..427871 + 157 15601252 - VCA0491 - hypothetical protein 483 39.04 -1 428335..428772 + 145 15601253 - VCA0493 - IS1004 transposase 484 38.98 -1 428878..429054 + 58 15601254 - VCA0494 - hypothetical protein 485 40.78 -1 429229..430101 + 290 15601255 - VCA0495 - hypothetical protein 486 40.53 -1 430170..430850 + 226 15601256 - VCA0496 - glutathione S-transferase, putative 487 38.04 -1 431036..431311 + 91 15601257 - VCA0497 - hypothetical protein 488 44.44 0 431305..431826 + 173 15601258 - VCA0498 - hypothetical protein 489 37.58 -1 431958..432122 - 54 15601259 - VCA0499 - hypothetical protein 490 49.02 0 432119..432220 - 33 15601260 - VCA0500 - hypothetical protein 491 38.64 -1 432501..432896 + 131 15601261 - VCA0501 - hypothetical protein 492 42.03 0 432953..433090 + 45 15601262 - VCA0502 - hypothetical protein 493 38.71 -1 433035..433313 - 92 15601263 - VCA0503 - hypothetical protein 494 44.72 0 433310..433678 - 122 15601264 - VCA0504 - relB protein 495 40.07 -1 433710..434303 + 197 15601265 - VCA0505 - acetyltransferase, putative 496 41.55 0 434487..434900 + 137 15601266 - VCA0506 - hypothetical protein 497 43.19 0 435419..435763 + 114 15601267 - VCA0507 - transposase OrfAB, subunit A 498 44.44 0 435760..436632 + 290 15601268 - VCA0508 - transposase OrfAB, subunit B 499 41.67 0 436670..436789 - 39 15601269 - VCA0509 - hypothetical protein 500 44.86 0 436922..439828 + 968 15601270 - VCA0510 - hypothetical protein 501 46.39 0 440291..442411 + 706 15601271 - VCA0511 - anaerobic ribonucleoside triphosphate reductase 502 48.08 0 442416..442883 + 155 15601272 nrdG VCA0512 - anaerobic ribonucleotide reductase-activating protein 503 48.31 0 443005..444186 + 393 161582043 - VCA0513 - aromatic amino acid aminotransferase 504 48.25 0 444244..444927 + 227 15601274 - VCA0514 - hypothetical protein 505 37.61 -1 445007..445123 - 38 15601275 - VCA0515 - hypothetical protein 506 51.29 +1 445161..446903 - 580 15601276 - VCA0516 - PTS system, fructose-specific IIBC component 507 50.42 0 446916..447869 - 317 15601277 - VCA0517 - 1-phosphofructokinase 508 50.37 0 447880..449082 - 400 15601278 - VCA0518 - bifunctional fructose-specific PTS IIA/HPr protein 509 49.44 0 449421..450401 + 326 15601279 - VCA0519 - DNA-binding transcriptional regulator FruR 510 50.09 0 450455..451594 + 379 15601280 - VCA0520 - exonuclease SbcD, putative 511 49.38 0 451596..454637 + 1013 15601281 - VCA0521 - exonuclease SbcC, putative 512 43.72 0 454734..456794 + 686 15601282 - VCA0522 - sensor histidine kinase/response regulator LuxN 513 40.60 -1 457023..458192 - 389 15601283 - VCA0523 - hypothetical protein 514 47.35 0 458389..459351 - 320 15601284 - VCA0524 - hypothetical protein 515 37.14 -1 459328..459432 + 34 15601285 - VCA0525 - hypothetical protein 516 48.26 0 459498..460904 - 468 15601286 - VCA0526 - chloride channel protein 517 47.58 0 461371..462360 + 329 15601287 - VCA0527 - hypothetical protein 518 48.78 0 462424..463368 - 314 15601288 rbgA VCA0528 - ribosomal biogenesis GTPase 519 48.95 0 463691..465553 + 620 15601289 - VCA0529 - potassium uptake protein, Kup system 520 51.67 +1 465651..468890 - 1079 15601290 - VCA0530 - pyruvate-flavoredoxin oxidoreductase 521 49.06 0 468993..470486 + 497 15601291 - VCA0531 - sensor histidine kinase 522 47.19 0 470476..471168 + 230 15601292 - VCA0532 - DNA-binding response regulator 523 48.95 0 471368..471604 + 78 15601293 - VCA0533 - tatA protein 524 44.88 0 472658..473038 - 126 15601294 - VCA0535 - hypothetical protein 525 46.71 0 473172..474038 - 288 15601295 - VCA0536 - hypothetical protein 526 46.23 0 474496..474999 - 167 15601296 - VCA0537 - hypothetical protein 527 45.97 0 475386..475931 + 181 15601297 - VCA0538 - cytochrome b561, putative 528 45.61 0 475928..476497 + 189 15601298 - VCA0539 - hypothetical protein 529 48.21 0 476605..478056 - 483 15601299 - VCA0540 - formate transporter 1, putative 530 33.33 -2 478160..478255 + 31 15601300 - VCA0541 - hypothetical protein 531 46.91 0 478273..479178 + 301 15601301 - VCA0542 - LysR family transcriptional regulator 532 47.37 0 479340..479852 + 170 15601302 - VCA0543 - hypothetical protein 533 49.07 0 480084..481748 - 554 15601303 - VCA0544 - hypothetical protein 534 48.54 0 481978..483720 + 580 15601304 - VCA0545 - 5`-nucleotidase, putative 535 47.34 0 484280..485236 + 318 15601305 - VCA0546 - hypothetical protein 536 40.74 -1 485540..485728 + 62 15601306 - VCA0547 - hypothetical protein 537 36.00 -2 485757..485906 + 49 15601307 - VCA0548 - hypothetical protein 538 47.57 0 485878..486453 - 191 15601308 - VCA0549 - phnA protein 539 46.72 0 486637..487719 + 360 15601309 - VCA0550 - hypothetical protein 540 48.92 0 487773..488003 - 76 15601310 - VCA0551 - hypothetical protein 541 47.59 0 488171..490471 - 766 15601311 - VCA0552 - fatty acid cis/trans isomerase 542 47.13 0 490560..490733 - 57 15601312 - VCA0553 - hypothetical protein 543 49.64 0 490884..492116 - 410 15601313 - VCA0554 - oxalate/formate antiporter, putative 544 33.33 -2 492174..492293 - 39 15601314 - VCA0555 - hypothetical protein 545 43.96 0 492527..493081 + 184 15601315 - VCA0556 - hypothetical protein 546 43.69 0 493351..494760 + 469 15601316 - VCA0557 - GGDEF family protein 547 48.76 0 495055..496623 + 522 15601317 - VCA0558 - gamma-glutamyltranspeptidase, putative 548 44.21 0 496698..497681 + 327 15601318 - VCA0559 - hypothetical protein 549 44.79 0 497678..498916 - 412 15601319 - VCA0560 - GGDEF family protein 550 44.27 0 499272..499646 + 124 15601320 - VCA0561 - hypothetical protein 551 42.65 0 499656..499934 + 92 15601321 - VCA0562 - hypothetical protein 552 48.28 0 500227..501765 + 512 15601322 pntA VCA0563 - NAD(P) transhydrogenase subunit alpha 553 47.13 0 501777..503153 + 458 15601323 pntB VCA0564 - pyridine nucleotide transhydrogenase 554 44.73 0 503254..504753 + 499 15601324 - VCA0565 - sensor histidine kinase 555 45.12 0 504647..505384 + 245 15601325 - VCA0566 - transcriptional regulator 556 41.64 0 505381..506271 + 296 15601326 - VCA0567 - hypothetical protein 557 43.53 0 506332..507498 + 388 15601327 - VCA0568 - hypothetical protein 558 44.44 0 507539..507700 + 53 15601328 - VCA0569 - hypothetical protein 559 41.99 0 508285..508596 - 103 15601329 - VCA0570 - translation initiation factor Sui1 560 41.67 0 508604..508987 - 127 15601330 - VCA0571 - hypothetical protein 561 42.49 0 509159..510163 - 334 15601331 ddl VCA0572 - D-alanyl-alanine synthetase A 562 45.75 0 510314..510901 - 195 15601332 - VCA0573 - DamX-related protein 563 46.20 0 511108..513789 + 893 15601333 - VCA0574 - hypothetical protein 564 48.09 0 513839..514726 - 295 15601334 - VCA0575 - LysR family transcriptional regulator 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.