version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 252 56.20 +2 275510..276340 - 276 15601023 - VCA0255 - hypothetical protein 253 51.34 +1 276337..277008 - 223 15601024 - VCA0256 - transcriptional regulator 254 53.54 +1 276984..278438 - 484 15601025 - VCA0257 - sensor histidine kinase 255 53.61 +1 278541..279053 - 170 15601026 - VCA0258 - hypothetical protein 256 39.53 -1 279096..279224 - 42 15601027 - VCA0259 - hypothetical protein 257 49.23 0 279248..279442 - 64 15601028 - VCA0260 - hypothetical protein 258 46.18 0 279430..279756 - 108 15601029 - VCA0261 - hypothetical protein 259 46.96 0 279866..280276 - 136 15601030 - VCA0262 - hypothetical protein 260 44.75 0 280382..280924 - 180 15601031 - VCA0263 - acetyltransferase, putative 261 45.38 0 280935..282113 - 392 15601032 - VCA0264 - transcriptional regulator, putative 262 43.31 0 282297..282677 + 126 15601033 - VCA0265 - hypothetical protein 263 46.64 0 282737..283510 - 257 15601034 - VCA0266 - AraC/XylS family transcriptional regulator 264 46.67 0 283612..284751 + 379 15601035 - VCA0267 - multidrug resistance protein D 265 47.41 0 285034..286965 + 643 15601036 - VCA0268 - methyl-accepting chemotaxis protein 266 49.04 0 286981..288654 + 557 15601037 - VCA0269 - decarboxylase, group II 267 48.72 0 288819..289988 + 389 15601038 - VCA0270 - D-alanyl-D-alanine carboxypeptidase 268 48.28 0 290166..290513 + 115 15601039 - VCA0271 - hypothetical protein 269 45.31 0 290571..290954 + 127 15601040 - VCA0272 - hypothetical protein 270 36.30 -2 291097..291231 + 44 15601041 - VCA0273 - hypothetical protein 271 49.17 0 291259..291978 + 239 15601042 - VCA0274 - carbonic anhydrase 272 38.81 -1 292265..292702 - 145 15601043 - VCA0275 - IS1004 transposase 273 47.51 0 295889..296269 - 126 15601044 - VCA0277 - glycine cleavage system protein H 274 51.22 +1 296306..297613 - 435 15601045 - VCA0278 - serine hydroxymethyltransferase 275 49.36 0 298001..298624 + 207 15601046 - VCA0279 - transcriptional regulator 276 45.85 0 300467..301624 + 385 15601047 - VCA0281 - integrase, putative 277 51.89 +1 301670..302650 + 326 15601048 - VCA0282 - IS5 transposase 278 37.75 -1 302926..304149 + 407 15601049 - VCA0283 - hypothetical protein 279 41.05 -1 304670..305200 + 176 15601050 - VCA0284 - hypothetical protein 280 39.43 -1 305200..305871 + 223 15601051 - VCA0285 - hypothetical protein 281 37.61 -1 305873..306223 + 116 15601052 - VCA0286 - hypothetical protein 282 45.67 0 306492..308420 + 642 15601053 - VCA0287 - threonyl-tRNA synthetase 283 46.67 0 308586..308975 + 129 15601864 infC VCA0288 - initiation factor IF3 284 45.13 0 309079..309273 + 64 15601054 rpmI VCA0289 - 50S ribosomal protein L35 285 46.05 0 309315..309668 + 117 15601055 rplT VCA0290 - 50S ribosomal protein L20 286 42.26 0 309750..310712 - 320 15601056 - VCA0291 - site-specific recombinase IntI4 287 38.20 -1 311034..311300 + 88 15601057 - VCA0292 - hypothetical protein 288 40.50 -1 311455..312054 + 199 15601058 - VCA0293 - hypothetical protein 289 42.40 0 312716..313090 + 124 15601059 - VCA0294 - hypothetical protein 290 44.97 0 313335..313523 + 62 15601060 - VCA0295 - hypothetical protein 291 40.20 -1 313804..313905 - 33 15601061 - VCA0296 - hypothetical protein 292 44.81 0 313887..314069 + 60 15601062 - VCA0297 - hypothetical protein 293 44.84 0 314325..314576 + 83 15601063 - VCA0298 - hypothetical protein 294 40.09 -1 314717..315160 + 147 15601064 - VCA0299 - hypothetical protein 295 40.63 -1 315311..315940 + 209 15601065 - VCA0300 - chloramphenicol acetyltransferase 296 42.63 0 316096..316848 + 250 15601066 - VCA0301 - short chain dehydrogenase/reductase family oxidoreductase 297 43.72 0 317150..317332 + 60 15601067 - VCA0302 - hypothetical protein 298 40.00 -1 317510..317914 + 134 15601068 - VCA0303 - hypothetical protein 299 45.36 0 318210..318392 + 60 15601069 - VCA0304 - hypothetical protein 300 39.32 -1 318630..318746 - 38 15601070 - VCA0305 - hypothetical protein 301 44.26 0 318746..318928 + 60 15601071 - VCA0306 - hypothetical protein 302 35.99 -2 319123..319800 + 225 15601072 - VCA0307 - hypothetical protein 303 38.71 -1 319962..321170 + 402 15601073 - VCA0308 - deoxyguanosinetriphosphate triphosphohydrolase-related protein 304 38.16 -1 321332..322036 + 234 15601074 - VCA0309 - hypothetical protein 305 39.34 -1 322167..322532 + 121 15601075 - VCA0310 - hypothetical protein 306 39.58 -1 322686..323021 - 111 15601076 - VCA0311 - hypothetical protein 307 39.92 -1 323022..323264 - 80 15601077 - VCA0312 - hypothetical protein 308 41.09 -1 323508..323894 + 128 15601078 - VCA0313 - MutT/nudix family protein 309 35.46 -2 324013..324294 + 93 15601079 - VCA0314 - hypothetical protein 310 41.51 0 324270..324428 - 52 15601080 - VCA0315 - hypothetical protein 311 43.02 0 324552..325088 + 178 15601081 - VCA0316 - acetyltransferase, putative 312 42.83 0 325225..325740 + 171 15601082 - VCA0317 - lipoprotein Blc 313 43.37 0 325890..326387 - 165 15601083 - VCA0318 - hypothetical protein 314 42.49 0 326384..326656 - 90 15601084 - VCA0319 - hypothetical protein 315 37.58 -1 326882..327046 - 54 15601085 - VCA0320 - hypothetical protein 316 36.94 -1 327161..327271 - 36 15601086 - VCA0321 - hypothetical protein 317 34.66 -2 327418..327870 + 150 15601087 - VCA0322 - hypothetical protein 318 38.72 -1 328018..328314 - 98 15601088 - VCA0323 - hypothetical protein 319 43.01 0 328280..328558 - 92 15601089 - VCA0324 - DNA-damage-inducible protein J 320 44.44 0 328799..329122 + 107 15601090 - VCA0325 - hypothetical protein 321 31.37 -2 329165..329266 - 33 15601091 - VCA0326 - hypothetical protein 322 45.83 0 329437..329580 + 47 15601092 - VCA0327 - hypothetical protein 323 41.35 0 329859..330257 + 132 15601093 - VCA0328 - biphenyl-2,3-diol 1,2-dioxygenase III-related protein 324 44.84 0 330452..330703 + 83 15601094 - VCA0329 - hypothetical protein 325 41.31 0 332490..332978 + 162 15601095 - VCA0330 - hypothetical protein 326 36.05 -2 333106..333768 + 220 15601096 - VCA0331 - hypothetical protein 327 41.20 0 333953..334219 + 88 15601097 - VCA0332 - hypothetical protein 328 41.46 0 334206..334451 + 81 15601098 - VCA0333 - hypothetical protein 329 29.99 -2 334535..335341 + 268 15601099 - VCA0334 - hypothetical protein 330 40.20 -1 335550..335651 - 33 15601100 - VCA0335 - hypothetical protein 331 44.81 0 335633..335815 + 60 15601101 - VCA0336 - hypothetical protein 332 41.89 0 336031..337035 + 334 15601102 - VCA0337 - microcin immunity protein MccF 333 40.28 -1 337188..337547 + 119 15601103 - VCA0338 - hypothetical protein 334 45.73 0 337820..338053 + 77 15601104 - VCA0339 - hypothetical protein 335 38.86 -1 338321..338827 + 168 15601105 - VCA0340 - hypothetical protein 336 41.35 0 338972..339370 + 132 15601106 - VCA0341 - biphenyl-2,3-diol 1,2-dioxygenase III-related protein 337 40.26 -1 339528..339830 + 100 15601107 - VCA0342 - hypothetical protein 338 44.84 0 340025..340276 + 83 15601108 - VCA0343 - hypothetical protein 339 37.32 -1 340545..340970 + 141 15601109 - VCA0344 - hypothetical protein 340 38.25 -1 341170..341799 + 209 15601110 - VCA0345 - hypothetical protein 341 41.46 0 342012..342491 + 159 15601111 - VCA0346 - H-REV 107-related protein 342 41.55 0 342679..343092 + 137 15601112 - VCA0347 - hypothetical protein 343 38.71 -1 343243..343521 - 92 15601113 - VCA0348 - hypothetical protein 344 44.72 0 343518..343886 - 122 15601114 - VCA0349 - relB protein 345 41.67 0 343997..344512 + 171 15601115 - VCA0350 - lipoprotein Blc 346 39.20 -1 344577..345173 + 198 15601116 - VCA0351 - hypothetical protein 347 40.20 -1 345481..345582 - 33 15601117 - VCA0352 - hypothetical protein 348 44.81 0 345564..345746 + 60 15601118 - VCA0353 - hypothetical protein 349 41.80 0 345853..346419 + 188 15601119 - VCA0354 - hypothetical protein 350 42.26 0 346568..347194 + 208 15601120 - VCA0355 - hypothetical protein 351 37.01 -1 347308..348015 + 235 15601121 - VCA0356 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0