version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 208 46.34 0 225591..227159 + 522 15600979 - VCA0210 - response regulator, putative 209 46.53 0 227217..229163 - 648 15600980 - VCA0211 - sensory box sensor histidine kinase 210 46.29 0 229338..230387 + 349 15600981 - VCA0212 - hypothetical protein 211 52.39 +1 230465..232054 - 529 15600982 - VCA0213 - hypothetical protein 212 49.88 0 232449..233693 - 414 15600983 emrD VCA0214 - multidrug resistance protein D 213 35.22 -2 233694..233852 - 52 15600984 - VCA0215 - hypothetical protein 214 44.19 0 233907..234173 + 88 15600985 - VCA0216 - hypothetical protein 215 45.28 0 234164..235243 - 359 15600986 - VCA0217 - GGDEF family protein 216 47.97 0 235364..236620 - 418 15600987 - VCA0218 - thermolabile hemolysin 217 47.75 0 237590..239815 + 741 15600988 - VCA0219 - haemolysin 218 48.57 0 240114..241760 + 548 15600989 - VCA0220 - hemolysin secretion protein HylB 219 51.08 +1 242027..243046 + 339 15600990 - VCA0221 - lactonizing lipase 220 52.98 +1 243056..243910 + 284 15600991 - VCA0222 - lipase chaperone 221 49.37 0 243986..246742 - 918 15600992 - VCA0223 - protease 222 38.24 -1 246827..247132 - 101 15600993 - VCA0224 - hypothetical protein 223 49.02 0 247686..248450 + 254 15600994 - VCA0225 - hypothetical protein 224 39.02 -1 248610..248732 - 40 15600995 - VCA0226 - hypothetical protein 225 44.71 0 248766..249767 + 333 15600996 - VCA0227 - iron(III) ABC transporter, periplasmic iron-compound-binding protein 226 46.33 0 249820..250758 + 312 15600997 - VCA0228 - iron(III) ABC transporter, permease protein 227 49.11 0 250748..251698 + 316 15600998 - VCA0229 - iron(III) ABC transporter, permease protein 228 49.93 0 251701..252465 + 254 15600999 - VCA0230 - iron(III) ABC transporter, ATP-binding protein 229 47.45 0 252511..253587 - 358 15601000 - VCA0231 - AraC/XylS family transcriptional regulator 230 49.84 0 255650..255970 + 106 15601001 - VCA0233 - hypothetical protein 231 41.03 -1 255986..256102 + 38 15601002 - VCA0234 - hypothetical protein 232 50.34 0 256240..257433 + 397 15601003 - VCA0235 - acetate kinase 233 45.12 0 257514..257810 + 98 15601004 - VCA0236 - hypothetical protein 234 47.54 0 257928..258497 - 189 15601005 - VCA0237 - hypothetical protein 235 48.24 0 258742..260391 + 549 15601006 - VCA0238 - sensor histidine kinase 236 48.44 0 260372..261046 + 224 15601007 - VCA0239 - transcriptional regulator 237 50.00 0 261049..261678 - 209 15601008 - VCA0240 - hypothetical protein 238 52.09 +1 261638..262522 - 294 15601009 - VCA0241 - putative L-xylulose 5-phosphate 3-epimerase 239 51.85 +1 262534..263181 - 215 15601010 ulaD VCA0242 - 3-keto-L-gulonate-6-phosphate decarboxylase 240 52.80 +1 263187..264008 - 273 15601011 - VCA0243 - hypothetical protein 241 53.82 +1 264014..264706 - 230 15601012 araD VCA0244 - L-ribulose-5-phosphate 4-epimerase 242 52.86 +1 264715..265221 - 168 15601013 - VCA0245 - PTS system, IIA component 243 51.05 +1 265319..267079 - 586 15601014 ulaA VCA0246 - ascorbate-specific PTS system enzyme IIC/IIB 244 47.62 0 267445..268200 + 251 15601015 - VCA0247 - transcriptional repressor UlaR 245 48.41 0 268327..269394 + 355 15601016 - VCA0248 - putative L-ascorbate 6-phosphate lactonase 246 50.75 0 269494..270027 - 177 15601017 - VCA0249 - cytochrome b561, putative 247 45.04 0 270200..271600 - 466 15601018 - VCA0250 - alpha-amylase 248 41.88 0 271740..271856 + 38 15601019 - VCA0251 - hypothetical protein 249 37.84 -1 271816..271926 + 36 15601020 - VCA0252 - hypothetical protein 250 48.93 0 271933..272631 + 232 15601021 - VCA0253 - antibiotic acetyltransferase 251 51.73 +1 273253..275421 - 722 15601022 - VCA0254 - hypothetical protein 252 56.20 +2 275510..276340 - 276 15601023 - VCA0255 - hypothetical protein 253 51.34 +1 276337..277008 - 223 15601024 - VCA0256 - transcriptional regulator 254 53.54 +1 276984..278438 - 484 15601025 - VCA0257 - sensor histidine kinase 255 53.61 +1 278541..279053 - 170 15601026 - VCA0258 - hypothetical protein 256 39.53 -1 279096..279224 - 42 15601027 - VCA0259 - hypothetical protein 257 49.23 0 279248..279442 - 64 15601028 - VCA0260 - hypothetical protein 258 46.18 0 279430..279756 - 108 15601029 - VCA0261 - hypothetical protein 259 46.96 0 279866..280276 - 136 15601030 - VCA0262 - hypothetical protein 260 44.75 0 280382..280924 - 180 15601031 - VCA0263 - acetyltransferase, putative 261 45.38 0 280935..282113 - 392 15601032 - VCA0264 - transcriptional regulator, putative 262 43.31 0 282297..282677 + 126 15601033 - VCA0265 - hypothetical protein 263 46.64 0 282737..283510 - 257 15601034 - VCA0266 - AraC/XylS family transcriptional regulator 264 46.67 0 283612..284751 + 379 15601035 - VCA0267 - multidrug resistance protein D 265 47.41 0 285034..286965 + 643 15601036 - VCA0268 - methyl-accepting chemotaxis protein 266 49.04 0 286981..288654 + 557 15601037 - VCA0269 - decarboxylase, group II 267 48.72 0 288819..289988 + 389 15601038 - VCA0270 - D-alanyl-D-alanine carboxypeptidase 268 48.28 0 290166..290513 + 115 15601039 - VCA0271 - hypothetical protein 269 45.31 0 290571..290954 + 127 15601040 - VCA0272 - hypothetical protein 270 36.30 -2 291097..291231 + 44 15601041 - VCA0273 - hypothetical protein 271 49.17 0 291259..291978 + 239 15601042 - VCA0274 - carbonic anhydrase 272 38.81 -1 292265..292702 - 145 15601043 - VCA0275 - IS1004 transposase 273 47.51 0 295889..296269 - 126 15601044 - VCA0277 - glycine cleavage system protein H 274 51.22 +1 296306..297613 - 435 15601045 - VCA0278 - serine hydroxymethyltransferase 275 49.36 0 298001..298624 + 207 15601046 - VCA0279 - transcriptional regulator 276 45.85 0 300467..301624 + 385 15601047 - VCA0281 - integrase, putative 277 51.89 +1 301670..302650 + 326 15601048 - VCA0282 - IS5 transposase 278 37.75 -1 302926..304149 + 407 15601049 - VCA0283 - hypothetical protein 279 41.05 -1 304670..305200 + 176 15601050 - VCA0284 - hypothetical protein 280 39.43 -1 305200..305871 + 223 15601051 - VCA0285 - hypothetical protein 281 37.61 -1 305873..306223 + 116 15601052 - VCA0286 - hypothetical protein 282 45.67 0 306492..308420 + 642 15601053 - VCA0287 - threonyl-tRNA synthetase 283 46.67 0 308586..308975 + 129 15601864 infC VCA0288 - initiation factor IF3 284 45.13 0 309079..309273 + 64 15601054 rpmI VCA0289 - 50S ribosomal protein L35 285 46.05 0 309315..309668 + 117 15601055 rplT VCA0290 - 50S ribosomal protein L20 286 42.26 0 309750..310712 - 320 15601056 - VCA0291 - site-specific recombinase IntI4 287 38.20 -1 311034..311300 + 88 15601057 - VCA0292 - hypothetical protein 288 40.50 -1 311455..312054 + 199 15601058 - VCA0293 - hypothetical protein 289 42.40 0 312716..313090 + 124 15601059 - VCA0294 - hypothetical protein 290 44.97 0 313335..313523 + 62 15601060 - VCA0295 - hypothetical protein 291 40.20 -1 313804..313905 - 33 15601061 - VCA0296 - hypothetical protein 292 44.81 0 313887..314069 + 60 15601062 - VCA0297 - hypothetical protein 293 44.84 0 314325..314576 + 83 15601063 - VCA0298 - hypothetical protein 294 40.09 -1 314717..315160 + 147 15601064 - VCA0299 - hypothetical protein 295 40.63 -1 315311..315940 + 209 15601065 - VCA0300 - chloramphenicol acetyltransferase 296 42.63 0 316096..316848 + 250 15601066 - VCA0301 - short chain dehydrogenase/reductase family oxidoreductase 297 43.72 0 317150..317332 + 60 15601067 - VCA0302 - hypothetical protein 298 40.00 -1 317510..317914 + 134 15601068 - VCA0303 - hypothetical protein 299 45.36 0 318210..318392 + 60 15601069 - VCA0304 - hypothetical protein 300 39.32 -1 318630..318746 - 38 15601070 - VCA0305 - hypothetical protein 301 44.26 0 318746..318928 + 60 15601071 - VCA0306 - hypothetical protein 302 35.99 -2 319123..319800 + 225 15601072 - VCA0307 - hypothetical protein 303 38.71 -1 319962..321170 + 402 15601073 - VCA0308 - deoxyguanosinetriphosphate triphosphohydrolase-related protein 304 38.16 -1 321332..322036 + 234 15601074 - VCA0309 - hypothetical protein 305 39.34 -1 322167..322532 + 121 15601075 - VCA0310 - hypothetical protein 306 39.58 -1 322686..323021 - 111 15601076 - VCA0311 - hypothetical protein 307 39.92 -1 323022..323264 - 80 15601077 - VCA0312 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0