version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 132 49.75 0 146647..147651 + 334 15600903 - VCA0132 - ribose operon repressor 133 51.50 +1 148508..149239 + 243 15600904 - VCA0134 - uridine phosphorylase 134 50.07 0 149379..150059 + 226 15600905 - VCA0135 - cyclic nucleotide binding protein, putative 135 47.66 0 150112..151179 - 355 161582045 glpQ VCA0136 - glycerophosphodiester phosphodiesterase 136 50.48 0 151333..152691 - 452 161582044 glpT VCA0137 - sn-glycerol-3-phosphate transporter 137 27.78 -2 152838..152945 - 35 15600908 - VCA0138 - hypothetical protein 138 44.25 0 153117..153464 - 115 15600909 - VCA0139 - hypothetical protein 139 50.70 0 153872..155080 + 402 15600910 - VCA0140 - spindolin-related protein 140 50.95 +1 155195..157249 - 684 15600911 - VCA0141 - C4-dicarboxylate transport sensor protein, putative 141 54.25 +1 157539..158891 + 450 15600912 - VCA0142 - C4-dicarboxylate transport transcriptional regulatory protein 142 41.44 0 158957..159067 + 36 15600913 - VCA0143 - hypothetical protein 143 51.61 +1 159145..160200 + 351 15600914 - VCA0144 - immunogenic protein 144 46.51 0 160169..160297 - 42 15600915 - VCA0145 - hypothetical protein 145 52.72 +1 160350..162515 + 721 15600916 - VCA0146 - hypothetical protein 146 50.00 0 162512..163723 + 403 15600917 - VCA0147 - hypothetical protein 147 50.22 0 163832..167839 + 1335 15600918 - VCA0148 - TagA-related protein 148 37.04 -1 167864..167971 + 35 15600919 - VCA0149 - hypothetical protein 149 48.72 0 167987..168493 + 168 15600920 def VCA0150 - peptide deformylase 150 46.93 0 168622..169974 + 450 15600921 - VCA0151 - oxidoreductase, putative 151 51.54 +1 170049..170372 - 107 15600922 - VCA0152 - putative monovalent cation/H+ antiporter subunit G 152 44.87 0 170372..170683 - 103 15600923 - VCA0153 - putative monovalent cation/H+ antiporter subunit F 153 47.38 0 170643..171119 - 158 15600924 - VCA0154 - hypothetical protein 154 48.96 0 171116..172612 - 498 15600925 - VCA0155 - NADH dehydrogenase, putative 155 50.56 0 172609..172962 - 117 15600926 - VCA0156 - putative monovalent cation/H+ antiporter subunit C 156 49.40 0 172962..175637 - 891 15600927 - VCA0157 - NADH dehydrogenase, putative 157 48.76 0 175784..175984 - 66 15600928 - VCA0158 - hypothetical protein 158 46.50 0 176056..176997 - 313 15600929 - VCA0159 - hypothetical protein 159 47.90 0 177193..178428 - 411 15600930 - VCA0160 - tryptophan-specific transport protein 160 47.92 0 178507..179925 - 472 15600931 tnaA VCA0161 - tryptophanase 161 36.71 -1 180491..180697 - 68 15600932 - VCA0162 - hypothetical protein 162 37.56 -1 180706..180918 + 70 15600933 - VCA0163 - hypothetical protein 163 45.64 0 180988..181572 - 194 15600934 - VCA0164 - hypothetical protein 164 46.41 0 181879..184011 + 710 15600935 - VCA0165 - GGDEF family protein 165 45.07 0 184257..184469 + 70 15600936 - VCA0166 - cold shock transcriptional regulator CspA 166 46.51 0 184758..185546 - 262 15600937 - VCA0167 - hypothetical protein 167 52.12 +1 185635..186177 - 180 15600938 - VCA0168 - hypothetical protein 168 49.84 0 186129..186740 - 203 15600939 - VCA0169 - hypothetical protein 169 49.69 0 186643..187290 - 215 15600940 - VCA0170 - hypothetical protein 170 52.70 +1 187284..189224 - 646 15600941 - VCA0171 - hypothetical protein 171 50.05 0 189226..190182 - 318 15600942 - VCA0172 - hypothetical protein 172 50.10 0 190169..190657 - 162 15600943 - VCA0173 - hypothetical protein 173 50.11 0 190654..191589 - 311 15600944 - VCA0174 - hypothetical protein 174 50.78 +1 191593..192549 - 318 15600945 - VCA0175 - MoxR-related protein 175 48.63 0 192834..194768 + 644 15600946 - VCA0176 - methyl-accepting chemotaxis protein 176 45.10 0 194825..195028 + 67 15600947 - VCA0177 - hypothetical protein 177 51.53 +1 195304..195957 - 217 15600948 - VCA0178 - frnE protein 178 49.71 0 196603..197811 + 402 15600949 - VCA0179 - NupC family protein 179 48.01 0 198062..199294 + 410 15600950 - VCA0180 - peptidase T 180 48.63 0 199466..200341 + 291 15600951 - VCA0181 - hypothetical protein 181 52.10 +1 200338..201930 - 530 15600952 - VCA0182 - anaerobic nitric oxide reductase transcription regulator 182 48.10 0 202121..203305 + 394 15600953 - VCA0183 - nitric oxide dioxygenase 183 45.24 0 203449..203658 - 69 15600954 - VCA0184 - cold shock DNA-binding domain-containing protein 184 43.86 0 204017..204244 + 75 15600955 - VCA0185 - hypothetical protein 185 46.03 0 204632..205009 + 125 15600956 - VCA0186 - hypothetical protein 186 44.70 0 205035..205166 - 43 15600957 - VCA0187 - hypothetical protein 187 43.01 0 205244..205522 + 92 15600958 - VCA0188 - hypothetical protein 188 46.87 0 205609..206613 + 334 15600959 - VCA0189 - response regulator 189 43.62 0 206613..207059 + 148 15600960 - VCA0190 - hypothetical protein 190 51.52 +1 207097..208581 + 494 15600961 - VCA0191 - hypothetical protein 191 48.59 0 208570..209565 - 331 15600962 - VCA0192 - D-lactate dehydrogenase 192 50.97 +1 209748..211091 + 447 15600963 - VCA0193 - Na+/H+ antiporter, putative 193 47.45 0 211093..211935 - 280 15600964 - VCA0194 - potassium channel protein, putative 194 44.44 0 212001..212549 - 182 15600965 - VCA0195 - hypothetical protein 195 37.83 -1 212665..213042 - 125 15600966 - VCA0196 - hypothetical protein 196 51.05 +1 213207..214250 + 347 15600967 - VCA0197 - guanosine 5'-monophosphate oxidoreductase 197 39.06 -1 214574..215725 + 383 15600968 - VCA0198 - site-specific DNA-methyltransferase, putative 198 34.74 -2 215849..217765 + 638 15600969 - VCA0199 - hypothetical protein 199 38.13 -1 217758..218882 + 374 15600970 - VCA0200 - hypothetical protein 200 31.74 -2 218879..219757 + 292 15600971 - VCA0201 - hypothetical protein 201 38.81 -1 219825..220262 - 145 15600972 - VCA0202 - IS1004 transposase 202 48.89 0 220767..222122 - 451 15600973 - VCA0204 - ATP-dependent RNA helicase RhlE 203 50.94 +1 222312..223640 - 442 15600974 - VCA0205 - anaerobic C4-dicarboxylate transporter 204 41.67 0 223751..223882 - 43 15600975 - VCA0206 - hypothetical protein 205 50.90 +1 223891..224721 - 276 15600976 nadE VCA0207 - NAD synthetase 206 48.67 0 224824..225351 + 175 15600977 - VCA0208 - nicotinic acid mononucleotide adenylyltransferase 207 50.82 +1 225302..225484 + 60 15600978 - VCA0209 - hypothetical protein 208 46.34 0 225591..227159 + 522 15600979 - VCA0210 - response regulator, putative 209 46.53 0 227217..229163 - 648 15600980 - VCA0211 - sensory box sensor histidine kinase 210 46.29 0 229338..230387 + 349 15600981 - VCA0212 - hypothetical protein 211 52.39 +1 230465..232054 - 529 15600982 - VCA0213 - hypothetical protein 212 49.88 0 232449..233693 - 414 15600983 emrD VCA0214 - multidrug resistance protein D 213 35.22 -2 233694..233852 - 52 15600984 - VCA0215 - hypothetical protein 214 44.19 0 233907..234173 + 88 15600985 - VCA0216 - hypothetical protein 215 45.28 0 234164..235243 - 359 15600986 - VCA0217 - GGDEF family protein 216 47.97 0 235364..236620 - 418 15600987 - VCA0218 - thermolabile hemolysin 217 47.75 0 237590..239815 + 741 15600988 - VCA0219 - haemolysin 218 48.57 0 240114..241760 + 548 15600989 - VCA0220 - hemolysin secretion protein HylB 219 51.08 +1 242027..243046 + 339 15600990 - VCA0221 - lactonizing lipase 220 52.98 +1 243056..243910 + 284 15600991 - VCA0222 - lipase chaperone 221 49.37 0 243986..246742 - 918 15600992 - VCA0223 - protease 222 38.24 -1 246827..247132 - 101 15600993 - VCA0224 - hypothetical protein 223 49.02 0 247686..248450 + 254 15600994 - VCA0225 - hypothetical protein 224 39.02 -1 248610..248732 - 40 15600995 - VCA0226 - hypothetical protein 225 44.71 0 248766..249767 + 333 15600996 - VCA0227 - iron(III) ABC transporter, periplasmic iron-compound-binding protein 226 46.33 0 249820..250758 + 312 15600997 - VCA0228 - iron(III) ABC transporter, permease protein 227 49.11 0 250748..251698 + 316 15600998 - VCA0229 - iron(III) ABC transporter, permease protein 228 49.93 0 251701..252465 + 254 15600999 - VCA0230 - iron(III) ABC transporter, ATP-binding protein 229 47.45 0 252511..253587 - 358 15601000 - VCA0231 - AraC/XylS family transcriptional regulator 230 49.84 0 255650..255970 + 106 15601001 - VCA0233 - hypothetical protein 231 41.03 -1 255986..256102 + 38 15601002 - VCA0234 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.