version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 96 46.41 0 103162..104385 + 407 15600867 - VCA0096 - hypothetical protein 97 49.09 0 104398..105114 - 238 15600868 - VCA0097 - hypothetical protein 98 47.78 0 105513..106820 + 435 15600869 - VCA0098 - nicotinate phosphoribosyltransferase 99 49.76 0 106851..107891 + 346 15600870 - VCA0099 - Gfo/Idh/MocA family oxidoreductase 100 49.19 0 107928..108299 - 123 15600871 - VCA0100 - phage shock protein E 101 44.51 0 108299..109855 - 518 15600872 - VCA0101 - hypothetical protein 102 48.33 0 110031..110690 - 219 15600873 - VCA0102 - CbbY family protein 103 51.04 +1 110871..112649 + 592 15600874 - VCA0103 - sulfate permease family protein 104 47.45 0 112691..113356 - 221 15600875 - VCA0104 - ribosomal large subunit pseudouridine synthase A 105 54.74 +1 115142..115426 + 94 15600876 - VCA0105 - hypothetical protein 106 46.00 0 115341..116414 + 357 15600877 - VCA0106 - hypothetical protein 107 47.73 0 116846..117352 + 168 15600878 - VCA0107 - hypothetical protein 108 47.19 0 117393..118871 + 492 15600879 - VCA0108 - hypothetical protein 109 47.49 0 118874..119311 + 145 15600880 - VCA0109 - hypothetical protein 110 48.02 0 119317..121086 + 589 15600881 - VCA0110 - hypothetical protein 111 51.33 +1 121050..122066 + 338 15600882 - VCA0111 - hypothetical protein 112 49.66 0 122069..123556 + 495 15600883 - VCA0112 - hypothetical protein 113 46.75 0 123559..124035 + 158 15600884 - VCA0113 - hypothetical protein 114 52.13 +1 124042..125376 + 444 15600885 - VCA0114 - hypothetical protein 115 48.58 0 125379..126152 + 257 15600886 - VCA0115 - hypothetical protein 116 50.96 +1 126178..128787 + 869 15600887 - VCA0116 - clpB protein 117 51.10 +1 128790..130382 + 530 15600888 - VCA0117 - sigma-54 dependent transcriptional regulator 118 54.39 +1 130352..131035 + 227 15600889 - VCA0118 - hypothetical protein 119 51.42 +1 131045..132454 + 469 15600890 - VCA0119 - hypothetical protein 120 48.34 0 132470..136015 + 1181 15600891 - VCA0120 - IcmF-related protein 121 49.29 0 136063..137328 + 421 15600892 - VCA0121 - hypothetical protein 122 41.98 0 137379..137621 + 80 15600893 - VCA0122 - hypothetical protein 123 47.09 0 137581..140634 + 1017 15600894 - VCA0123 - vgrG protein 124 34.15 -2 140631..140999 + 122 15600895 - VCA0124 - hypothetical protein 125 45.59 0 141147..141407 - 86 15600896 - VCA0125 - hypothetical protein 126 40.48 -1 141382..141591 + 69 15600897 - VCA0126 - hypothetical protein 127 47.13 0 141640..142110 + 156 15600898 - VCA0127 - D-ribose pyranase 128 49.90 0 142137..143639 + 500 15600899 - VCA0128 - D-ribose transporter ATP binding protein 129 50.35 0 143636..144634 + 332 15600900 rbsC VCA0129 - ribose ABC transporter permease protein 130 51.07 +1 144693..145577 + 294 15600901 - VCA0130 - D-ribose transporter subunit RbsB 131 50.49 0 145716..146636 + 306 15600902 - VCA0131 - ribokinase 132 49.75 0 146647..147651 + 334 15600903 - VCA0132 - ribose operon repressor 133 51.50 +1 148508..149239 + 243 15600904 - VCA0134 - uridine phosphorylase 134 50.07 0 149379..150059 + 226 15600905 - VCA0135 - cyclic nucleotide binding protein, putative 135 47.66 0 150112..151179 - 355 161582045 glpQ VCA0136 - glycerophosphodiester phosphodiesterase 136 50.48 0 151333..152691 - 452 161582044 glpT VCA0137 - sn-glycerol-3-phosphate transporter 137 27.78 -2 152838..152945 - 35 15600908 - VCA0138 - hypothetical protein 138 44.25 0 153117..153464 - 115 15600909 - VCA0139 - hypothetical protein 139 50.70 0 153872..155080 + 402 15600910 - VCA0140 - spindolin-related protein 140 50.95 +1 155195..157249 - 684 15600911 - VCA0141 - C4-dicarboxylate transport sensor protein, putative 141 54.25 +1 157539..158891 + 450 15600912 - VCA0142 - C4-dicarboxylate transport transcriptional regulatory protein 142 41.44 0 158957..159067 + 36 15600913 - VCA0143 - hypothetical protein 143 51.61 +1 159145..160200 + 351 15600914 - VCA0144 - immunogenic protein 144 46.51 0 160169..160297 - 42 15600915 - VCA0145 - hypothetical protein 145 52.72 +1 160350..162515 + 721 15600916 - VCA0146 - hypothetical protein 146 50.00 0 162512..163723 + 403 15600917 - VCA0147 - hypothetical protein 147 50.22 0 163832..167839 + 1335 15600918 - VCA0148 - TagA-related protein 148 37.04 -1 167864..167971 + 35 15600919 - VCA0149 - hypothetical protein 149 48.72 0 167987..168493 + 168 15600920 def VCA0150 - peptide deformylase 150 46.93 0 168622..169974 + 450 15600921 - VCA0151 - oxidoreductase, putative 151 51.54 +1 170049..170372 - 107 15600922 - VCA0152 - putative monovalent cation/H+ antiporter subunit G 152 44.87 0 170372..170683 - 103 15600923 - VCA0153 - putative monovalent cation/H+ antiporter subunit F 153 47.38 0 170643..171119 - 158 15600924 - VCA0154 - hypothetical protein 154 48.96 0 171116..172612 - 498 15600925 - VCA0155 - NADH dehydrogenase, putative 155 50.56 0 172609..172962 - 117 15600926 - VCA0156 - putative monovalent cation/H+ antiporter subunit C 156 49.40 0 172962..175637 - 891 15600927 - VCA0157 - NADH dehydrogenase, putative 157 48.76 0 175784..175984 - 66 15600928 - VCA0158 - hypothetical protein 158 46.50 0 176056..176997 - 313 15600929 - VCA0159 - hypothetical protein 159 47.90 0 177193..178428 - 411 15600930 - VCA0160 - tryptophan-specific transport protein 160 47.92 0 178507..179925 - 472 15600931 tnaA VCA0161 - tryptophanase 161 36.71 -1 180491..180697 - 68 15600932 - VCA0162 - hypothetical protein 162 37.56 -1 180706..180918 + 70 15600933 - VCA0163 - hypothetical protein 163 45.64 0 180988..181572 - 194 15600934 - VCA0164 - hypothetical protein 164 46.41 0 181879..184011 + 710 15600935 - VCA0165 - GGDEF family protein 165 45.07 0 184257..184469 + 70 15600936 - VCA0166 - cold shock transcriptional regulator CspA 166 46.51 0 184758..185546 - 262 15600937 - VCA0167 - hypothetical protein 167 52.12 +1 185635..186177 - 180 15600938 - VCA0168 - hypothetical protein 168 49.84 0 186129..186740 - 203 15600939 - VCA0169 - hypothetical protein 169 49.69 0 186643..187290 - 215 15600940 - VCA0170 - hypothetical protein 170 52.70 +1 187284..189224 - 646 15600941 - VCA0171 - hypothetical protein 171 50.05 0 189226..190182 - 318 15600942 - VCA0172 - hypothetical protein 172 50.10 0 190169..190657 - 162 15600943 - VCA0173 - hypothetical protein 173 50.11 0 190654..191589 - 311 15600944 - VCA0174 - hypothetical protein 174 50.78 +1 191593..192549 - 318 15600945 - VCA0175 - MoxR-related protein 175 48.63 0 192834..194768 + 644 15600946 - VCA0176 - methyl-accepting chemotaxis protein 176 45.10 0 194825..195028 + 67 15600947 - VCA0177 - hypothetical protein 177 51.53 +1 195304..195957 - 217 15600948 - VCA0178 - frnE protein 178 49.71 0 196603..197811 + 402 15600949 - VCA0179 - NupC family protein 179 48.01 0 198062..199294 + 410 15600950 - VCA0180 - peptidase T 180 48.63 0 199466..200341 + 291 15600951 - VCA0181 - hypothetical protein 181 52.10 +1 200338..201930 - 530 15600952 - VCA0182 - anaerobic nitric oxide reductase transcription regulator 182 48.10 0 202121..203305 + 394 15600953 - VCA0183 - nitric oxide dioxygenase 183 45.24 0 203449..203658 - 69 15600954 - VCA0184 - cold shock DNA-binding domain-containing protein 184 43.86 0 204017..204244 + 75 15600955 - VCA0185 - hypothetical protein 185 46.03 0 204632..205009 + 125 15600956 - VCA0186 - hypothetical protein 186 44.70 0 205035..205166 - 43 15600957 - VCA0187 - hypothetical protein 187 43.01 0 205244..205522 + 92 15600958 - VCA0188 - hypothetical protein 188 46.87 0 205609..206613 + 334 15600959 - VCA0189 - response regulator 189 43.62 0 206613..207059 + 148 15600960 - VCA0190 - hypothetical protein 190 51.52 +1 207097..208581 + 494 15600961 - VCA0191 - hypothetical protein 191 48.59 0 208570..209565 - 331 15600962 - VCA0192 - D-lactate dehydrogenase 192 50.97 +1 209748..211091 + 447 15600963 - VCA0193 - Na+/H+ antiporter, putative 193 47.45 0 211093..211935 - 280 15600964 - VCA0194 - potassium channel protein, putative 194 44.44 0 212001..212549 - 182 15600965 - VCA0195 - hypothetical protein 195 37.83 -1 212665..213042 - 125 15600966 - VCA0196 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.