version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 1..1072315 1093 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 986 51.26 +1 956834..957151 + 105 15601756 - VCA1003 - hypothetical protein 987 48.62 0 957203..957817 - 204 15601757 - VCA1004 - hypothetical protein 988 47.06 0 957933..958391 - 152 15601758 - VCA1005 - MarR family transcriptional regulator 989 52.28 +1 958488..958925 + 145 15601759 - VCA1006 - organic hydroperoxide resistance protein, putative 990 50.51 0 958939..959037 - 32 15601760 - VCA1007 - hypothetical protein 991 47.29 0 959181..960176 + 331 15601761 - VCA1008 - outer membrane protein, putative 992 43.33 0 960202..960321 + 39 15601762 - VCA1009 - hypothetical protein 993 52.95 +1 960337..961233 + 298 15601763 - VCA1010 - hypothetical protein 994 47.57 0 961260..961898 + 212 15601764 - VCA1011 - glutaredoxin-related protein 995 48.08 0 962112..962579 - 155 15601765 - VCA1012 - hypothetical protein 996 49.45 0 962576..963307 - 243 15601766 - VCA1013 - hypothetical protein 997 37.25 -1 963470..963571 - 33 15601767 - VCA1014 - hypothetical protein 998 49.30 0 963699..965132 + 477 15601768 - VCA1015 - Na+/H+ antiporter 999 46.02 0 965198..965599 - 133 15601769 - VCA1016 - hypothetical protein 1000 49.37 0 965610..966083 - 157 15601770 - VCA1017 - methylated-DNA--protein-cysteine S-methyltransferase 1001 50.48 0 966084..967442 - 452 15601771 - VCA1018 - ada regulatory protein 1002 50.34 0 967698..968144 + 148 15601772 - VCA1019 - hypothetical protein 1003 48.43 0 968221..969141 - 306 15601773 - VCA1020 - LysR family transcriptional regulator 1004 45.28 0 969256..969615 + 119 15601774 - VCA1021 - hypothetical protein 1005 48.44 0 969661..969885 + 74 15601775 - VCA1022 - hypothetical protein 1006 46.83 0 969825..971684 + 619 15601776 - VCA1023 - hypothetical protein 1007 44.15 0 971811..972152 - 113 15601777 - VCA1024 - hypothetical protein 1008 45.94 0 972427..973227 + 266 15601778 nagB VCA1025 - glucosamine-6-phosphate deaminase 1009 47.84 0 973358..974515 - 385 15601779 - VCA1026 - hypothetical protein 1010 46.24 0 974668..975504 - 278 15601780 - VCA1027 - maltose operon periplasmic protein, putative 1011 44.04 0 975709..976959 - 416 15601781 lamB VCA1028 - maltoporin 1012 47.29 0 977379..979349 + 656 15601782 - VCA1029 - glycogen operon protein GlgX 1013 48.81 0 979484..979735 + 83 15601783 - VCA1030 - hypothetical protein 1014 45.83 0 981942..982349 - 135 15601784 - VCA1032 - hypothetical protein 1015 48.58 0 982617..983993 - 458 15601785 - VCA1033 - extracellular solute-binding protein, putative 1016 50.12 0 984002..986002 - 666 15601786 - VCA1034 - methyl-accepting chemotaxis protein 1017 45.60 0 986116..986433 + 105 15601787 - VCA1035 - hypothetical protein 1018 48.89 0 987883..988602 + 239 15601788 - VCA1037 - amino acid ABC transporter, ATP-binding protein 1019 51.81 +1 988599..989399 + 266 15601789 - VCA1038 - amino acid ABC transporter, permease protein 1020 50.18 0 989435..990271 + 278 15601790 - VCA1039 - amino acid ABC transporter, periplasmic amino acid-binding protein 1021 51.62 +1 990272..991168 + 298 15601791 - VCA1040 - amino acid ABC transporter, permease protein 1022 54.05 +1 991281..992984 + 567 15601792 - VCA1041 - phosphomannomutase, putative 1023 40.30 -1 993043..993444 - 133 15601793 - VCA1042 - Ccm2-related protein 1024 40.00 -1 993354..994298 - 314 15601794 - VCA1043 - tagE protein 1025 26.39 -2 994599..994742 + 47 15601795 - VCA1044 - hypothetical protein 1026 49.13 0 994881..996830 + 649 15601796 - VCA1045 - PTS system, mannitol-specific IIABC component 1027 49.35 0 996931..998085 + 384 15601797 - VCA1046 - mannitol-1-phosphate 5-dehydrogenase 1028 45.19 0 998134..998715 + 193 15601798 mtlR VCA1047 - mannitol repressor protein 1029 49.25 0 998829..999764 + 311 15601799 - VCA1048 - Gfo/Idh/MocA family oxidoreductase 1030 46.76 0 999865..1000743 - 292 15601800 - VCA1049 - hypothetical protein 1031 49.24 0 1000877..1001800 + 307 15601801 - VCA1050 - hypothetical protein 1032 48.15 0 1001797..1002228 - 143 15601802 - VCA1051 - hypothetical protein 1033 52.84 +1 1002304..1003026 - 240 15601803 - VCA1052 - hypothetical protein 1034 50.30 0 1003208..1003708 - 166 15601804 - VCA1053 - hypothetical protein 1035 53.83 +1 1003730..1004368 - 212 15601805 - VCA1054 - hypothetical protein 1036 49.35 0 1004468..1005391 + 307 15601806 - VCA1055 - LysR family transcriptional regulator 1037 47.90 0 1005434..1007746 - 770 15601807 - VCA1056 - methyl-accepting chemotaxis protein 1038 51.11 +1 1008136..1008855 - 239 15601808 - VCA1057 - short chain dehydrogenase/reductase family oxidoreductase 1039 50.33 0 1009003..1009908 + 301 15601809 - VCA1058 - LysR family transcriptional regulator 1040 48.71 0 1010002..1010619 + 205 15601810 - VCA1059 - hypothetical protein 1041 51.60 +1 1010684..1011340 - 218 15601811 ribB VCA1060 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1042 41.48 0 1011647..1011781 + 44 15601812 - VCA1061 - hypothetical protein 1043 50.76 0 1011799..1013118 - 439 15601813 - VCA1062 - putrescine transporter 1044 49.93 0 1013186..1015348 - 720 15601814 - VCA1063 - ornithine decarboxylase 1045 39.02 -1 1015489..1015611 + 40 15601815 - VCA1064 - hypothetical protein 1046 40.65 -1 1015688..1015810 - 40 15601816 - VCA1065 - hypothetical protein 1047 47.08 0 1016102..1016341 - 79 15601817 - VCA1066 - hypothetical protein 1048 50.31 0 1016331..1017773 - 480 15601818 - VCA1067 - aldehyde dehydrogenase 1049 46.79 0 1017946..1018428 - 160 15601819 - VCA1068 - AsnC family transcriptional regulator 1050 51.04 +1 1018626..1020545 - 639 15601820 - VCA1069 - methyl-accepting chemotaxis protein 1051 47.75 0 1020875..1021096 - 73 15601821 - VCA1070 - hypothetical protein 1052 51.78 +1 1021280..1022770 - 496 15601822 - VCA1071 - sodium/proline symporter 1053 48.50 0 1022843..1023541 - 232 15601823 - VCA1072 - hypothetical protein 1054 48.84 0 1027022..1027885 - 287 15601824 - VCA1074 - AraC/XylS family transcriptional regulator 1055 45.88 0 1028244..1029383 + 379 15601825 - VCA1075 - hypothetical protein 1056 39.68 -1 1029350..1029475 + 41 15601826 - VCA1076 - hypothetical protein 1057 47.74 0 1029543..1031360 + 605 15601827 - VCA1077 - hypothetical protein 1058 47.08 0 1031460..1032419 + 319 15601828 - VCA1078 - LuxR family transcriptional regulator 1059 48.90 0 1032448..1033083 - 211 15601829 - VCA1079 - pyridoxamine 5'-phosphate oxidase 1060 47.58 0 1033253..1034698 + 481 15601830 - VCA1080 - HlyD family secretion protein 1061 44.34 0 1034707..1035369 + 220 15601831 - VCA1081 - hypothetical protein 1062 46.74 0 1035375..1036538 + 387 15601832 - VCA1082 - hypothetical protein 1063 46.61 0 1036577..1037284 + 235 15601833 - VCA1083 - hypothetical protein 1064 49.03 0 1037299..1039413 + 704 15601834 - VCA1084 - toxin secretion ATP-binding protein 1065 47.58 0 1039548..1041218 - 556 15601835 - VCA1085 - hypothetical protein 1066 45.87 0 1041477..1043183 - 568 15601836 - VCA1086 - response regulator 1067 42.00 0 1043207..1043506 - 99 15601837 - VCA1087 - anti-sigma F factor antagonist, putative 1068 45.37 0 1043516..1044670 - 384 15601838 - VCA1088 - methyl-accepting chemotaxis protein 1069 45.30 0 1045749..1046450 - 233 15601839 - VCA1090 - chemoreceptor glutamine deamidase CheD 1070 44.16 0 1046389..1047219 - 276 15601840 - VCA1091 - chemotaxis protein methyltransferase CheR 1071 48.80 0 1047234..1049270 - 678 15601841 - VCA1092 - methyl-accepting chemotaxis protein 1072 49.57 0 1049284..1049745 - 153 15601842 - VCA1093 - purine-binding chemotaxis protein CheW 1073 48.67 0 1049742..1050269 - 175 15601843 - VCA1094 - purine-binding chemotaxis protein CheW 1074 49.05 0 1050278..1052440 - 720 15601844 - VCA1095 - chemotaxis protein CheA 1075 45.50 0 1052489..1052866 - 125 15601845 - VCA1096 - chemotaxis protein CheY 1076 47.06 0 1052859..1053164 - 101 15601846 - VCA1097 - hypothetical protein 1077 48.91 0 1053362..1054927 + 521 15601847 - VCA1098 - ABC transporter, periplasmic substrate-binding protein 1078 49.84 0 1054920..1055876 + 318 15601848 - VCA1099 - ABC transporter, permease protein 1079 49.82 0 1055857..1056669 + 270 15601849 - VCA1100 - ABC transporter, permease protein 1080 50.92 +1 1056588..1058048 + 486 15601850 - VCA1101 - ABC transporter, ATP-binding protein 1081 47.01 0 1058303..1059955 + 550 15601851 - VCA1102 - hypothetical protein 1082 52.53 +1 1059996..1060094 + 32 15601852 - VCA1103 - hypothetical protein 1083 48.86 0 1061510..1062166 - 218 15601853 - VCA1105 - DNA-binding response regulator 1084 48.94 0 1062171..1062452 - 93 15601854 - VCA1106 - hypothetical protein 1085 48.94 0 1062449..1062826 - 125 15601855 - VCA1107 - hypothetical protein 45.97 MEAN 4.79 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.