version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 937 48.84 0 1013096..1014217 - 373 15640965 - VC0949 - rod shape-determining protein RodA 938 48.88 0 1014214..1016130 - 638 15640966 - VC0950 - penicillin-binding protein 2 939 51.38 0 1016137..1016607 - 156 15640967 - VC0951 - SPOUT methyltransferase superfamily protein 940 45.60 0 1016610..1016927 - 105 15640968 - VC0952 - hypothetical protein 941 49.47 0 1016996..1018024 - 342 15640969 holA VC0953 - DNA polymerase III subunit delta 942 47.82 0 1018030..1018671 - 213 15640970 - VC0954 - rare lipoprotein B 943 43.81 0 1018687..1018791 - 34 15640971 - VC0955 - hypothetical protein 944 49.16 0 1018821..1021505 - 894 15640972 leuS VC0956 - leucyl-tRNA synthetase 945 46.28 0 1021527..1021997 + 156 15640973 - VC0957 - hypothetical protein 946 51.19 0 1022053..1023570 - 505 15640974 lnt VC0958 - apolipoprotein N-acyltransferase 947 49.77 0 1023611..1024486 - 291 15640975 - VC0959 - hemolysin, putative 948 47.10 0 1024556..1025020 - 154 15640976 - VC0960 - putative metalloprotease 949 48.73 0 1025017..1026120 - 367 15640977 - VC0961 - phoH family protein 950 50.04 0 1026188..1027612 - 474 15640978 - VC0962 - hypothetical protein 951 50.42 0 1027836..1029029 + 397 15640979 - VC0963 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 952 45.49 0 1029142..1029651 - 169 15640980 - VC0964 - glucose-specific PTS system component 953 46.17 0 1029760..1031481 - 573 15640981 - VC0965 - phosphoenolpyruvate-protein phosphotransferase 954 46.51 0 1031615..1031872 - 85 15640982 - VC0966 - phosphocarrier protein HPr 955 36.67 -2 1031957..1032166 - 69 15640983 - VC0967 - hypothetical protein 956 46.13 0 1032170..1033138 - 322 15640984 - VC0968 - cysteine synthase A 957 47.28 0 1033261..1034013 - 250 15640985 - VC0969 - putative sulfate transport protein CysZ 958 48.17 0 1034243..1035118 + 291 15640986 - VC0970 - cell division protein ZipA 959 48.21 0 1035251..1037260 + 669 15640987 ligA VC0971 - NAD-dependent DNA ligase LigA 960 45.14 0 1037891..1038940 + 349 15640988 - VC0972 - porin, putative 961 39.58 -1 1039017..1039832 + 271 15640989 - VC0973 - hypothetical protein 962 49.05 0 1039893..1040312 + 139 15640990 - VC0974 - MerR family transcriptional regulator 963 48.25 0 1040356..1040925 - 189 15640991 - VC0975 - hypothetical protein 964 45.49 0 1040813..1041733 - 306 15640992 - VC0976 - hypothetical protein 965 45.60 0 1042164..1043084 - 306 15640993 - VC0977 - hypothetical protein 966 36.75 -2 1043256..1043372 - 38 15640994 - VC0978 - hypothetical protein 967 48.07 0 1043447..1044274 - 275 15640995 - VC0979 - short chain dehydrogenase 968 48.25 0 1045625..1046194 + 189 15640996 - VC0981 - phosphodiesterase 969 49.66 0 1046275..1046568 - 97 15640997 - VC0982 - selenoprotein W-related protein 970 42.72 -1 1046609..1047130 - 173 15640998 - VC0983 - regulatory protein ToxS 971 45.42 0 1047140..1048024 - 294 15640999 - VC0984 - cholera toxin transcriptional activator 972 45.75 0 1048252..1050159 + 635 15641000 - VC0985 - heat shock protein 90 973 46.98 0 1050494..1051138 + 214 15641001 adk VC0986 - adenylate kinase 974 47.18 0 1051253..1052227 + 324 15641002 hemH VC0987 - ferrochelatase 975 46.41 0 1052327..1053871 - 514 15641003 tppB VC0988 - putative tripeptide transporter permease 976 38.67 -2 1054133..1054282 + 49 15641004 - VC0989 - hypothetical protein 977 45.18 0 1054316..1054813 + 165 15641005 rfaH VC0990 - transcriptional activator RfaH 978 46.49 0 1054961..1056625 - 554 15641006 asnB VC0991 - asparagine synthetase B 979 47.51 0 1056821..1058407 - 528 15641007 - VC0992 - glutathione-regulated potassium-efflux system protein KefB, putative 980 46.91 0 1058502..1059716 - 404 15641008 - VC0993 - N-acetylglucosamine repressor 981 45.82 0 1059719..1060855 - 378 15641009 nagA VC0994 - N-acetylglucosamine-6-phosphate deacetylase 982 48.98 0 1061324..1062895 + 523 15641010 - VC0995 - PTS system, N-acetylglucosamine-specific IIABC component 983 40.20 -1 1063024..1063125 + 33 15641011 - VC0996 - hypothetical protein 984 46.56 0 1063143..1064813 + 556 15641012 - VC0997 - glutaminyl-tRNA synthetase 985 49.49 0 1064978..1069843 + 1621 15641013 - VC0998 - hypothetical protein 986 50.82 0 1069965..1070759 + 264 15641014 truA VC0999 - tRNA pseudouridine synthase A 987 49.84 0 1070933..1071859 + 308 15641015 - VC1000 - acetyl-CoA carboxylase subunit beta 988 50.95 0 1071904..1073169 + 421 15641016 - VC1001 - folylpolyglutamate synthase/dihydrofolate synthase 989 47.07 0 1073170..1073766 + 198 15641017 - VC1002 - dedD protein 990 46.75 0 1073829..1074320 + 163 15641018 - VC1003 - bacteriocin production protein 991 48.65 0 1074353..1075867 + 504 15641019 - VC1004 - amidophosphoribosyltransferase 992 51.13 0 1075995..1077320 - 441 15641020 - VC1005 - hypothetical protein 993 46.58 0 1077421..1078152 - 243 15641021 - VC1006 - ribonuclease T 994 43.06 -1 1078165..1078308 - 47 15641022 - VC1007 - hypothetical protein 995 48.14 0 1078369..1079253 + 294 15641023 - VC1008 - sodium-type flagellar protein MotY 996 48.07 0 1079302..1079742 - 146 15641024 - VC1009 - hypothetical protein 997 46.85 0 1079901..1080455 - 184 15641025 - VC1010 - lactoylglutathione lyase 998 47.35 0 1080358..1080999 - 213 15641026 - VC1011 - endonuclease III 999 51.37 0 1081026..1081718 - 230 15641027 - VC1012 - SoxR-reducing system protein RsxE 1000 48.73 0 1081720..1082349 - 209 15641028 - VC1013 - electron transport complex protein RnfG 1001 53.39 +1 1082361..1083407 - 348 15641029 rnfD VC1014 - electron transport complex protein RnfD 1002 52.91 +1 1083407..1085812 - 801 15641030 - VC1015 - electron transport complex protein RnfC 1003 52.21 +1 1085740..1086327 - 195 15641031 - VC1016 - electron transport complex protein RnfB 1004 48.28 0 1086327..1086908 - 193 161582015 - VC1017 - Na(+)-translocating NADH-quinone reductase subunit E 1005 48.08 0 1087790..1089819 + 676 15642773 uvrB VC1018 - excinuclease ABC subunit B 1006 41.29 -1 1089757..1089957 - 66 15641033 - VC1020 - hypothetical protein 1007 49.85 0 1090250..1091617 + 455 15641034 - VC1021 - LuxO repressor protein 1008 46.49 0 1091621..1091962 + 113 15641035 - VC1022 - phosphorelay protein 1009 51.18 0 1091951..1092841 - 296 15641036 - VC1023 - hypothetical protein 1010 47.76 0 1093132..1094136 + 334 15641037 moaA VC1024 - molybdenum cofactor biosynthesis protein A 1011 49.71 0 1094196..1094708 + 170 15641038 - VC1025 - molybdenum cofactor biosynthesis protein B 1012 51.55 0 1094716..1095198 + 160 15641039 moaC VC1026 - molybdenum cofactor biosynthesis protein C 1013 50.41 0 1095195..1095440 + 81 15641040 moaD VC1027 - molybdopterin synthase small subunit 1014 52.32 +1 1095442..1095894 + 150 15641041 - VC1028 - molybdenum cofactor biosynthesis protein E 1015 47.59 0 1095909..1096883 - 324 15641042 - VC1029 - GGDEF family protein 1016 40.86 -1 1096938..1097030 - 30 15641043 - VC1030 - hypothetical protein 1017 48.30 0 1097088..1097528 + 146 15641044 - VC1031 - inosine monophosphate dehydrogenase-related protein 1018 43.43 0 1097461..1097658 - 65 15641045 - VC1032 - hypothetical protein 1019 53.62 +1 1097641..1099947 + 768 15641046 zntA VC1033 - zinc/cadmium/mercury/lead-transporting ATPase 1020 52.51 +1 1100393..1101169 + 258 15641047 - VC1034 - uridine phosphorylase 1021 46.42 0 1101242..1102135 - 297 15641048 - VC1035 - hypothetical protein 1022 49.03 0 1102361..1104412 - 683 161582014 metG VC1036 - methionyl-tRNA synthetase 1023 51.78 +1 1104498..1105646 + 382 15641050 - VC1037 - mrp protein 1024 48.94 0 1105805..1106464 + 219 15641051 - VC1038 - uridine kinase 1025 47.63 0 1106562..1108673 + 703 15641052 - VC1039 - asmA protein 1026 49.34 0 1108745..1109350 - 201 15641053 - VC1040 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1027 49.15 0 1109436..1109903 + 155 15641054 - VC1041 - phosphotyrosine protein phosphatase 1028 47.81 0 1109930..1111228 - 432 15641055 - VC1042 - long-chain fatty acid transport protein 1029 45.69 0 1111531..1112817 - 428 15641056 - VC1043 - long-chain fatty acid transport protein 1030 47.38 0 1113077..1113838 - 253 15641057 - VC1044 - hypothetical protein 1031 44.44 0 1113801..1114367 - 188 15641058 - VC1045 - RNA polymerase sigma factor 1032 49.21 0 1114748..1116202 + 484 15641059 fadI VC1046 - 3-ketoacyl-CoA thiolase 1033 49.74 0 1116202..1118328 + 708 161582013 fadJ VC1047 - multifunctional fatty acid oxidation complex subunit alpha 1034 50.82 0 1118454..1119002 + 182 15641061 - VC1048 - hypothetical protein 1035 47.00 0 1119081..1119980 - 299 15641062 - VC1049 - LysR family transcriptional regulator 1036 45.80 0 1120189..1121295 + 368 15641063 - VC1050 - response regulator 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.