version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 44 54.41 +1 41998..43302 - 434 15640076 - VC0044 - sun protein 45 51.48 0 43334..44281 - 315 15640077 fmt VC0045 - methionyl-tRNA formyltransferase 46 48.04 0 44299..44808 - 169 15640078 def VC0046 - peptide deformylase 47 50.17 0 44900..46075 + 391 15640079 - VC0047 - hypothetical protein 48 51.34 0 46075..47190 + 371 15640080 - VC0048 - smf protein 49 46.54 0 47193..47669 + 158 15640081 - VC0049 - hypothetical protein 50 49.04 0 47679..48251 + 190 15640082 - VC0050 - DNA topoisomerase I-related protein 51 51.23 0 48324..49457 - 377 15640083 - VC0051 - phosphoribosylaminoimidazole carboxylase ATPase subunit 52 52.67 +1 49461..49946 - 161 15640084 - VC0052 - phosphoribosylaminoimidazole carboxylase catalytic subunit 53 43.65 0 49961..50086 + 41 15640085 - VC0053 - hypothetical protein 54 53.62 +1 50104..50670 + 188 15640086 - VC0054 - Sua5/YciO/YrdC family protein 55 49.89 0 50689..51606 + 305 15640087 - VC0055 - coproporphyrinogen III oxidase 56 50.06 0 51668..52504 + 278 15640088 aroE VC0056 - shikimate 5-dehydrogenase 57 44.93 0 52501..52776 + 91 15640089 - VC0057 - hypothetical protein 58 47.75 0 52757..53311 - 184 15640090 - VC0058 - carbonic anhydrase 59 40.43 -1 53497..53637 + 46 15640091 - VC0059 - hypothetical protein 60 43.31 0 59356..59736 + 126 15640092 ccrB VC0060 - camphor resistance protein CrcB 61 47.57 0 59988..61925 + 645 15640093 - VC0061 - thiamine biosynthesis protein ThiC 62 46.41 0 61929..63251 + 440 15640094 thiE VC0062 - thiamine-phosphate pyrophosphorylase 63 50.32 0 63238..64014 + 258 15640095 - VC0063 - thiF protein 64 48.45 0 63957..64214 + 85 15640096 - VC0064 - sulfur carrier protein ThiS 65 50.45 0 64220..64990 + 256 15640097 thiG VC0065 - thiazole synthase 66 47.80 0 64987..66099 + 370 15640098 thiH VC0066 - thiamine biosynthesis protein ThiH 67 50.56 0 66324..68117 - 597 15640099 - VC0067 - aminopeptidase P 68 47.46 0 68250..69233 - 327 15640100 - VC0068 - LysR family transcriptional regulator 69 50.12 0 69296..70498 + 400 15640101 - VC0069 - multidrug resistance protein, putative 70 46.67 0 70602..70886 + 94 15640102 - VC0070 - hypothetical protein 71 45.45 0 70975..71436 - 153 15640103 - VC0071 - DNA-binding transcriptional regulator AsnC 72 50.11 0 71512..73818 + 768 15640104 - VC0072 - sensory box/GGDEF family protein 73 52.22 +1 73785..74663 + 292 15640105 - VC0073 - hypothetical protein 74 50.77 0 74781..75170 + 129 15640106 - VC0074 - hypothetical protein 75 48.31 0 75266..76153 - 295 15640107 - VC0075 - MadN protein 76 48.59 0 76210..76635 - 141 15640108 - VC0076 - universal stress protein A 77 43.75 0 76681..76776 + 31 15640109 - VC0077 - hypothetical protein 78 44.51 0 76782..77327 + 181 15640110 - VC0078 - ferritin 79 47.53 0 77403..77726 + 107 15640111 - VC0079 - universal stress protein UspB 80 51.96 +1 77859..79055 + 398 15640112 - VC0080 - hypothetical protein 81 50.66 0 79052..79963 - 303 15640113 - VC0081 - hypothetical protein 82 50.58 0 80077..81618 + 513 15640114 - VC0082 - hypothetical protein 83 49.55 0 81663..82445 + 260 15640115 ubiE VC0083 - ubiquinone/menaquinone biosynthesis methyltransferase 84 50.80 0 82454..83077 + 207 15640116 - VC0084 - hypothetical protein 85 49.17 0 83074..84708 + 544 15640117 ubiB VC0085 - putative ubiquinone biosynthesis protein UbiB 86 44.58 0 84768..85016 + 82 15640118 tatA VC0086 - twin argininte translocase protein A 87 52.99 +1 85020..85421 + 133 15640119 - VC0087 - sec-independent translocase 88 48.47 0 85510..86262 + 250 15640120 - VC0088 - hypothetical protein 89 47.70 0 86574..87575 + 333 15640121 - VC0089 - cytochrome c551 peroxidase 90 51.28 0 87681..89045 - 454 15640122 - VC0090 - DNA-damage-inducible protein F 91 50.34 0 89116..89985 - 289 15640123 - VC0091 - O-methyltransferase-related protein 92 52.70 +1 90013..90642 - 209 15640124 - VC0092 - LexA repressor 93 51.79 +1 90962..93388 + 808 161582036 - VC0093 - glycerol-3-phosphate acyltransferase 94 49.59 0 93464..94318 - 284 15640126 ubiA VC0094 - 4-hydroxybenzoate octaprenyltransferase 95 46.74 0 94319..94870 - 183 15640127 - VC0095 - chorismate--pyruvate lyase 96 39.39 -1 94893..94991 - 32 15640128 - VC0096 - hypothetical protein 97 45.74 0 95062..95472 + 136 15640129 - VC0097 - flagellar basal body-associated protein FliL-like protein 98 51.67 0 95592..97571 - 659 15640130 - VC0098 - methyl-accepting chemotaxis protein 99 48.32 0 97946..98779 - 277 15640131 - VC0099 - glpG protein 100 46.11 0 98786..99106 - 106 15640132 glpE VC0100 - thiosulfate sulfurtransferase 101 36.57 -2 99187..99402 - 71 15640133 - VC0101 - hypothetical protein 102 38.30 -2 99635..99775 - 46 15640134 - VC0102 - hypothetical protein 103 45.96 0 99867..100634 - 255 15640135 - VC0103 - hypothetical protein 104 47.41 0 100690..100824 - 44 15640136 - VC0104 - hypothetical protein 105 49.62 0 100811..101854 + 347 15640137 - VC0105 - delta-aminolevulinic acid dehydratase 106 43.06 -1 101958..102389 + 143 15640138 - VC0106 - hypothetical protein 107 36.23 -2 102908..103045 - 45 15640139 - VC0107 - hypothetical protein 108 50.20 0 103098..105902 + 934 15640140 - VC0108 - DNA polymerase I 109 54.39 +1 105855..105968 - 37 15640141 - VC0109 - hypothetical protein 110 44.44 0 106165..106299 + 44 15640142 - VC0110 - hypothetical protein 111 47.66 0 106649..107311 - 220 15640143 - VC0111 - GTPase EngB 112 48.81 0 107409..108080 + 223 15640144 - VC0112 - cytochrome c4 113 46.94 0 108252..108920 + 222 15640145 - VC0113 - methyltransferase-related protein 114 51.18 0 108920..109468 + 182 15640146 - VC0114 - hypothetical protein 115 50.00 0 109475..109966 + 163 15640147 - VC0115 - hypothetical protein 116 47.96 0 110051..111493 + 480 15640148 - VC0116 - coproporphyrinogen III oxidase 117 50.79 0 111557..112753 - 398 15640149 - VC0117 - hemY protein 118 52.00 +1 112750..113949 - 399 15640150 - VC0118 - uroporphyrin-III C-methyltransferase, putative 119 50.32 0 113933..114715 - 260 15640151 hemD VC0119 - uroporphyrinogen-III synthase 120 54.19 +1 114761..115714 - 317 15640152 hemC VC0120 - porphobilinogen deaminase 121 39.46 -1 115891..116037 - 48 15640153 - VC0121 - hypothetical protein 122 48.82 0 116053..118584 + 843 15640154 cyaA VC0122 - adenylate cyclase 123 48.57 0 118690..119004 - 104 15640155 cyaY VC0123 - frataxin-like protein 124 50.40 0 119229..120482 + 417 15640156 - VC0125 - diaminopimelate decarboxylase 125 52.23 +1 120494..121324 + 276 161582035 dapF VC0126 - diaminopimelate epimerase 126 52.50 +1 121338..122036 + 232 15640158 - VC0127 - hypothetical protein 127 51.82 +1 122005..122940 + 311 15640159 xerC VC0128 - site-specific tyrosine recombinase XerC 128 52.08 +1 122943..123662 + 239 15640160 - VC0129 - hypothetical protein 129 52.09 +1 123772..126261 + 829 15640161 - VC0130 - GGDEF family protein 130 54.77 +1 126294..126890 - 198 15640162 - VC0131 - hypothetical protein 131 52.43 +1 126887..128431 - 514 15640163 - VC0132 - hypothetical protein 132 47.09 0 128444..128632 + 62 15640164 - VC0133 - hypothetical protein 133 47.95 0 128715..129542 - 275 15640165 - VC0134 - hypothetical protein 134 47.00 0 129657..130673 - 338 15640166 - VC0135 - lysophospholipase L2 135 47.90 0 130748..131365 + 205 15640167 rhtB VC0136 - homoserine/homoserine lactone efflux protein 136 48.73 0 131313..132611 + 432 15640168 - VC0137 - hypothetical protein 137 54.17 +1 132619..132738 - 39 15640169 - VC0138 - hypothetical protein 138 46.50 0 132791..133261 - 156 15640170 - VC0139 - DPS family protein 139 45.45 0 133431..133760 - 109 15640171 - VC0140 - hypothetical protein 140 40.95 -1 133799..133903 + 34 15640172 - VC0141 - hypothetical protein 141 43.09 -1 133965..134333 + 122 15640173 - VC0142 - hypothetical protein 142 25.58 -2 134836..135093 + 85 15640174 - VC0143 - hypothetical protein 143 48.57 0 135210..135839 + 209 15640175 - VC0144 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.