version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 750 49.65 0 812244..813512 + 422 15640779 hisS VC0760 - histidyl-tRNA synthetase 751 49.11 0 813549..814163 + 204 15640780 - VC0761 - hypothetical protein 752 51.59 0 814176..815336 + 386 15640781 - VC0762 - outer membrane protein assembly complex subunit YfgL 753 49.23 0 815529..817013 + 494 15640782 engA VC0763 - GTP-binding protein EngA 754 46.30 0 817034..817951 + 305 15640783 - VC0764 - hypothetical protein 755 44.44 0 818256..818489 + 77 15640784 - VC0765 - hypothetical protein 756 49.59 0 818470..819810 - 446 15640785 xseA VC0766 - exodeoxyribonuclease VII large subunit 757 49.80 0 820012..821481 + 489 15640786 - VC0767 - inositol-5-monophosphate dehydrogenase 758 48.78 0 821588..823141 + 517 15640787 guaA VC0768 - bifunctional GMP synthase/glutamine amidotransferase protein 759 49.80 0 823377..825101 + 574 15640788 - VC0769 - chitinase, putative 760 49.16 0 825292..825885 + 197 15640789 - VC0770 - hypothetical protein 761 48.41 0 826197..827078 + 293 15640790 - VC0771 - vibriobactin-specific isochorismatase 762 50.67 0 827179..828810 - 543 15640791 - VC0772 - vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase 763 51.85 +1 828821..830008 - 395 15640792 - VC0773 - vibriobactin-specific isochorismate synthase 764 50.44 0 830176..830964 + 262 15640793 - VC0774 - 2,3-dihydroxybenzoate-2,3-dehydrogenase 765 50.80 0 830976..832292 - 438 15640794 - VC0775 - vibriobactin synthesis protein, putative 766 49.59 0 832470..833447 + 325 15640795 - VC0776 - iron-enterobactin transporter periplasmic binding protein 767 52.80 +1 833444..834496 + 350 15640796 - VC0777 - ferric vibriobactin ABC transporter, permease protein 768 52.27 +1 834475..835551 + 358 15640797 - VC0778 - ferric vibriobactin ABC transporter, permease protein 769 50.95 0 835668..836507 + 279 15640798 - VC0779 - ferric vibriobactin ABC transporter, ATP-binding protein 770 49.75 0 836438..837223 + 261 15640799 - VC0780 - vibriobactin synthase component D 771 47.03 0 837233..838159 + 308 15640800 - VC0781 - LysR family transcriptional regulator 772 47.75 0 838152..838262 - 36 15640801 - VC0782 - hypothetical protein 773 48.56 0 838377..840359 + 660 15640802 - VC0783 - hypothetical protein 774 50.42 0 840439..841989 - 516 15640803 - VC0784 - sodium/alanine symporter 775 55.56 +1 842268..842366 - 32 15640804 - VC0785 - hypothetical protein 776 51.18 0 842367..843632 - 421 15640805 - VC0786 - D-amino acid dehydrogenase small subunit 777 51.02 0 843733..844665 + 310 15640806 - VC0787 - LysR family transcriptional regulator 778 50.61 0 844790..845119 + 109 15640807 - VC0788 - DOPA-dioxygenase-related protein 779 43.96 0 845285..845557 + 90 15640808 - VC0789 - hypothetical protein 780 47.95 0 845591..846274 - 227 15640809 - VC0790 - transcriptional regulator CitB 781 49.76 0 846288..847985 - 565 15640810 - VC0791 - sensor kinase citA 782 52.53 +1 848056..849357 - 433 15640811 - VC0792 - oxaloacetate decarboxylase, beta subunit 783 52.42 +1 849373..851171 - 599 15642772 oadA-2 VC0793m - pyruvate carboxylase subunit B 784 48.57 0 851190..851609 - 139 15640812 - VC0794 - hypothetical protein 785 49.29 0 851557..852903 - 448 15640813 - VC0795 - citrate/sodium symporter 786 45.28 0 853165..854235 + 356 15640814 - VC0796 - citrate (pro-3S)-lyase ligase 787 53.87 +1 854287..854583 + 98 15640815 - VC0797 - citrate lyase subunit gamma 788 54.77 +1 854565..855455 + 296 15640816 - VC0798 - citrate lyase, beta subunit 789 52.59 +1 855391..856995 + 534 15640817 - VC0799 - citrate lyase, alpha subunit 790 53.82 +1 856992..857528 + 178 15640818 - VC0800 - citX protein 791 51.91 +1 857506..858447 + 313 15640819 - VC0801 - citG protein 792 49.12 0 858794..859192 + 132 15640820 - VC0802 - hypothetical protein 793 52.33 +1 859267..860040 + 257 15640821 - VC0803 - RNA methyltransferase 794 51.23 0 860219..860542 - 107 15640822 - VC0804 - ferredoxin 795 51.04 0 860584..860679 + 31 15640823 - VC0805 - hypothetical protein 796 52.38 +1 860789..862405 + 538 15640824 - VC0806 - hypothetical protein 797 47.66 0 862473..863156 - 227 15640825 - VC0807 - hypothetical protein 798 43.14 -1 863128..863280 - 50 15640826 - VC0808 - hypothetical protein 799 48.64 0 863289..865058 + 589 15640827 - VC0809 - hypothetical protein 800 34.50 -2 865250..865765 + 171 15640828 - VC0810 - hypothetical protein 801 32.91 -2 866099..866803 - 234 15640829 - VC0811 - hypothetical protein 802 43.64 0 866873..869812 - 979 15640830 - VC0812 - helicase-related protein 803 44.21 0 869813..870391 - 192 15640831 - VC0813 - tellurite resistance protein-related protein 804 44.58 0 870819..871298 - 159 15640832 - VC0814 - transcriptional regulator, putative 805 42.30 -1 871283..872653 - 456 15640833 - VC0815 - hypothetical protein 806 38.80 -2 872764..872946 - 60 15640834 - VC0816 - hypothetical protein 807 45.02 0 873242..874225 + 327 15640835 - VC0817 - transposase, putative 808 35.73 -2 875273..876898 - 541 15640836 - VC0819 - aldehyde dehydrogenase 809 31.99 -2 876974..880015 + 1013 15640837 - VC0820 - ToxR-activated gene A protein 810 28.51 -2 880128..881267 + 379 15640838 - VC0821 - hypothetical protein 811 32.88 -2 881390..884728 + 1112 15640839 - VC0822 - inner membrane protein, putative 812 35.78 -2 884725..885663 + 312 15640840 - VC0823 - hypothetical protein 813 39.19 -1 885773..886267 + 164 15640841 - VC0824 - tagD protein 814 38.11 -2 886543..888405 - 620 15640842 - VC0825 - toxin co-regulated pilus biosynthesis protein I 815 36.64 -2 888846..889511 + 221 15640843 - VC0826 - toxin co-regulated pilus biosynthesis protein P 816 41.61 -1 889496..889906 + 136 15640844 - VC0827 - toxin co-regulated pilus biosynthesis protein H 817 43.26 0 890449..891123 + 224 15640845 - VC0828 - toxin co-regulated pilin 818 40.60 -1 891203..892495 + 430 15640846 - VC0829 - toxin co-regulated pilus biosynthesis protein B 819 35.76 -2 892495..892947 + 150 15640847 - VC0830 - toxin co-regulated pilus biosynthesis protein Q 820 35.71 -2 892950..894419 + 489 15640848 - VC0831 - toxin co-regulated pilus biosynthesis outer membrane protein C 821 28.07 -2 894412..894867 + 151 15640849 - VC0832 - toxin co-regulated pilus biosynthesis protein R 822 30.35 -2 894855..895691 + 278 15640850 - VC0833 - toxin co-regulated pilus biosynthesis protein D 823 31.15 -2 895707..896165 + 152 15640851 - VC0834 - toxin co-regulated pilus biosynthesis protein S 824 36.18 -2 896155..897666 + 503 15640852 - VC0835 - toxin co-regulated pilus biosynthesis protein T 825 35.58 -2 897641..898663 + 340 15640853 - VC0836 - toxin co-regulated pilus biosynthesis protein E 826 34.91 -2 898673..899689 + 338 15640854 - VC0837 - toxin co-regulated pilus biosynthesis protein F 827 28.28 -2 899896..900726 + 276 15640855 - VC0838 - TCP pilus virulence regulatory protein 828 31.50 -2 900726..901487 + 253 15640856 - VC0839 - leader peptidase TcpJ 829 34.29 -2 901494..903374 + 626 15640857 - VC0840 - accessory colonization factor AcfB 830 36.32 -2 903380..904150 + 256 15640858 - VC0841 - accessory colonization factor AcfC 831 30.17 -2 904166..904639 + 157 15640859 - VC0842 - hypothetical protein 832 34.76 -2 904648..905556 + 302 15640860 - VC0843 - tagE protein 833 31.33 -2 905559..906206 - 215 15640861 - VC0844 - accessory colonization factor AcfA 834 38.51 -2 906379..910941 + 1520 15640862 - VC0845 - hypothetical protein 835 46.34 0 912856..914124 - 422 15640863 - VC0847 - phage family integrase 836 48.35 0 914726..915211 - 161 15640864 smpB VC0848 - SsrA-binding protein 837 47.62 0 915389..915829 + 146 15640865 - VC0849 - hypothetical protein 838 48.08 0 915826..916137 + 103 15640866 - VC0850 - hypothetical protein 839 45.01 0 916215..916625 - 136 15640867 - VC0851 - small protein A 840 48.17 0 916733..918397 - 554 15640868 - VC0852 - recombination and repair protein 841 46.89 0 918527..919411 - 294 15640869 ppnK VC0853 - inorganic polyphosphate/ATP-NAD kinase 842 49.42 0 919557..920159 + 200 15640870 - VC0854 - heat shock protein GrpE 843 48.38 0 920423..922330 + 635 15640871 dnaK VC0855 - molecular chaperone DnaK 844 51.66 0 922531..923676 + 381 15640872 - VC0856 - dnaJ protein 845 43.92 0 923726..924169 - 147 15640873 - VC0857 - fimbrial assembly protein PilE, putative 846 42.70 -1 924224..924778 + 184 15640874 - VC0858 - type IV pilin, putative 847 40.46 -1 924747..925349 + 200 15640875 - VC0859 - hypothetical protein 848 38.65 -2 925340..926581 + 413 15640876 - VC0860 - hypothetical protein 849 45.17 0 926571..926984 + 137 15640877 - VC0861 - type IV pilin, putative 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0