version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 439 50.15 0 472552..473544 - 330 15640471 pdxA VC0444 - 4-hydroxythreonine-4-phosphate dehydrogenase 440 48.23 0 473534..474829 - 431 15640472 - VC0445 - survival protein SurA 441 46.66 0 474882..477245 - 787 15640473 - VC0446 - organic solvent tolerance protein 442 50.29 0 477392..478246 + 284 15640474 djlA VC0447 - DNA-J like membrane chaperone protein 443 36.84 -2 478258..478371 - 37 15640475 - VC0448 - hypothetical protein 444 50.37 0 479294..480919 - 541 15640476 - VC0449 - methyl-accepting chemotaxis protein 445 46.60 0 481683..482873 - 396 15640477 - VC0450 - membrane-bound lytic murein transglycosylase C 446 45.79 0 482912..483184 - 90 15640478 - VC0451 - hypothetical protein 447 51.41 0 483198..484259 - 353 15640479 - VC0452 - A/G-specific adenine glycosylase 448 51.94 +1 484499..485218 + 239 15640480 trmB VC0453 - tRNA (guanine-N(7))-methyltransferase 449 51.10 0 485299..486249 + 316 15640481 - VC0454 - glutaminase 450 52.04 +1 486470..487645 - 391 15640482 - VC0455 - coproporphyrinogen III oxidase 451 52.74 +1 487639..488241 - 200 15640483 - VC0456 - putative deoxyribonucleotide triphosphate pyrophosphatase 452 47.69 0 488311..488742 - 143 15640484 - VC0457 - hypothetical protein 453 53.26 +1 488788..489078 - 96 15640485 - VC0458 - hypothetical protein 454 51.79 +1 489078..489635 - 185 15640486 - VC0459 - hypothetical protein 455 54.58 +1 489689..490507 - 272 15640487 - VC0460 - pyrroline-5-carboxylate reductase 456 49.37 0 490560..491270 - 236 15640488 - VC0461 - hypothetical protein 457 48.75 0 491296..492333 + 345 15640489 - VC0462 - twitching motility protein PilT 458 50.77 0 492348..493454 + 368 15640490 - VC0463 - twitching motility protein PilT 459 51.62 0 493566..494369 + 267 15640491 - VC0464 - LuxR family transcriptional regulator 460 50.88 0 494454..495758 + 434 15640492 - VC0465 - tyrosyl-tRNA synthetase 461 51.54 0 495796..496218 - 140 15640493 - VC0466 - Holliday junction resolvase-like protein 462 51.24 0 496299..496862 - 187 161582023 - VC0467 - hypothetical protein 463 49.32 0 496898..497854 - 318 15640495 - VC0468 - glutathione synthetase 464 51.50 0 497868..498599 - 243 15640496 - VC0469 - hypothetical protein 465 49.86 0 498737..499432 - 231 15640497 - VC0470 - extracellular deoxyribonuclease 466 50.92 0 499560..500048 - 162 15640498 - VC0471 - hypothetical protein 467 50.26 0 500170..501327 - 385 15640499 - VC0472 - S-adenosylmethionine synthetase 468 53.43 +1 501605..503689 + 694 15640500 - VC0473 - transketolase 469 50.95 0 503761..504657 - 298 15640501 - VC0474 - iron-regulated virulence regulatory protein IrgB 470 49.82 0 504802..506760 + 652 15640502 - VC0475 - enterobactin receptor protein 471 45.81 0 506912..507937 + 341 161582022 - VC0476 - erythrose 4-phosphate dehydrogenase 472 48.94 0 508071..509249 + 392 15640504 pgk VC0477 - phosphoglycerate kinase 473 47.17 0 509405..510481 + 358 15640505 - VC0478 - fructose-bisphosphate aldolase 474 31.25 -2 510669..510764 + 31 15640506 - VC0479 - hypothetical protein 475 45.25 0 510777..511640 + 287 15640507 - VC0480 - hypothetical protein 476 45.13 0 511704..512339 - 211 15640508 - VC0481 - LysE/YggA family protein 477 46.60 0 512504..513400 + 298 15640509 - VC0482 - chromosome replication initiation inhibitor protein 478 46.44 0 513480..514196 + 238 15640510 - VC0483 - hypothetical protein 479 39.39 -1 514529..514660 + 43 15640511 - VC0484 - hypothetical protein 480 47.56 0 514732..516144 - 470 15640512 - VC0485 - pyruvate kinase 481 45.21 0 516560..517342 + 260 15640513 - VC0486 - DeoR family transcriptional regulator 482 49.48 0 517405..519237 + 610 15640514 - VC0487 - D-fructose-6-phosphate amidotransferase 483 50.09 0 519298..520377 - 359 15640515 - VC0488 - extracellular solute-binding protein, putative 484 48.32 0 520634..522394 - 586 15640516 - VC0489 - hemolysin, putative 485 37.36 -2 523156..525117 - 653 15640517 - VC0490 - hypothetical protein 486 34.45 -2 525118..525654 - 178 15640518 - VC0491 - hypothetical protein 487 37.53 -2 525623..526789 - 388 15640519 - VC0492 - hypothetical protein 488 39.27 -1 527045..527920 - 291 15640520 - VC0493 - hypothetical protein 489 43.41 0 528305..528949 + 214 15640521 - VC0494 - hypothetical protein 490 45.19 0 529011..529685 + 224 15640522 - VC0495 - hypothetical protein 491 41.83 -1 529739..530338 + 199 15640523 - VC0496 - hypothetical protein 492 44.78 0 530402..530602 + 66 15640524 - VC0497 - transcriptional regulator 493 46.49 0 530684..531124 + 146 15640525 - VC0498 - ribonuclease H 494 41.33 -1 534198..534722 - 174 15640526 - VC0502 - type IV pilin, putative 495 43.79 0 535418..536698 + 426 15640527 - VC0503 - hypothetical protein 496 45.18 0 536876..537103 - 75 15640528 - VC0504 - hypothetical protein 497 49.32 0 537151..537519 - 122 15640529 - VC0505 - hypothetical protein 498 48.03 0 537550..538284 - 244 15640530 - VC0506 - hypothetical protein 499 44.07 0 538423..538599 - 58 15640531 - VC0507 - hypothetical protein 500 46.40 0 538603..539046 - 147 15640532 - VC0508 - hypothetical protein 501 46.62 0 539097..539540 - 147 15640533 - VC0509 - hypothetical protein 502 47.89 0 539531..540004 - 157 15640534 - VC0510 - DNA repair protein RadC-related protein 503 32.50 -2 540216..540335 + 39 15640535 - VC0511 - hypothetical protein 504 43.65 0 541319..542908 + 529 15640536 - VC0512 - methyl-accepting chemotaxis protein 505 27.45 -2 544362..545177 + 271 15640537 - VC0513 - AraC/XylS family transcriptional regulator 506 35.25 -2 545174..547054 + 626 15640538 - VC0514 - methyl-accepting chemotaxis protein 507 33.90 -2 547158..548390 + 410 15640539 - VC0515 - hypothetical protein 508 40.34 -1 548780..550021 - 413 15640540 - VC0516 - phage integrase 509 47.39 0 550407..552284 - 625 15640541 - VC0517 - RNA polymerase sigma factor RpoD 510 46.40 0 552383..554145 - 587 15642769 dnaG VC0518 - DNA primase 511 49.32 0 554235..554678 - 147 15640542 - VC0519 - hypothetical protein 512 50.46 0 554708..554923 - 71 15640543 rpsU VC0520 - 30S ribosomal protein S21 513 50.05 0 555164..556182 + 339 66473506 gcp VC0521 - O-sialoglycoprotein endopeptidase 514 49.94 0 556336..557148 + 270 15640544 - VC0522 - beta-ketoadipate enol-lactone hydrolase, putative 515 52.31 +1 557197..557823 - 208 15640545 - VC0523 - putative glycerol-3-phosphate acyltransferase PlsY 516 53.33 +1 557976..558365 + 129 15640546 - VC0524 - dihydroneopterin aldolase FolB, putative 517 51.19 0 558281..558868 + 195 15640547 - VC0525 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 518 45.77 0 558865..559668 + 267 15640548 uppP VC0526 - undecaprenyl pyrophosphate phosphatase 519 49.14 0 559777..560067 + 96 15640549 ftsB VC0527 - cell division protein FtsB 520 52.50 +1 560064..560762 + 232 15640550 ispD VC0528 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 521 51.78 +1 560759..561235 + 158 15640551 ispF VC0529 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 522 50.55 0 561265..562350 + 361 15640552 truD VC0530 - tRNA pseudouridine synthase D 523 49.87 0 562313..563104 + 263 15640553 surE VC0531 - stationary phase survival protein SurE 524 51.04 0 563097..563723 + 208 15640554 pcm VC0532 - protein-L-isoaspartate O-methyltransferase 525 44.12 0 563723..564658 + 311 15640555 - VC0533 - lipoprotein NlpD 526 46.83 0 564732..565739 + 335 15640556 - VC0534 - RNA polymerase sigma-38 factor 527 52.18 +1 565832..568420 - 862 15640557 - VC0535 - DNA mismatch repair protein 528 48.04 0 568427..568528 + 33 15640558 - VC0536 - hypothetical protein 529 52.14 +1 568688..569575 - 295 15640559 cysM VC0537 - cysteine synthase B 530 49.40 0 569959..570960 + 333 15640560 - VC0538 - thiosulfate ABC transporter, periplasmic thiosulfate-binding protein 531 51.41 0 571037..571888 + 283 15640561 - VC0539 - sulfate ABC transporter, permease protein 532 51.50 0 571899..572762 + 287 15640562 - VC0540 - sulfate ABC transporter, permease protein 533 50.75 0 572759..573889 + 376 15640563 - VC0541 - sulfate ABC transporter, ATP-binding protein 534 51.48 0 574056..574562 + 168 15640564 - VC0542 - CinA-related protein 535 46.97 0 574522..575760 + 412 15640565 recA VC0543 - recombinase A 536 47.71 0 575893..576351 + 152 15640566 recX VC0544 - recombination regulator RecX 537 50.60 0 576524..579106 + 860 15640567 alaS VC0545 - alanyl-tRNA synthetase 538 36.67 -2 579138..579257 + 39 15640568 - VC0546 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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