version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 313 46.65 0 331605..332678 + 357 15640345 murB VC0318 - UDP-N-acetylenolpyruvoylglucosamine reductase 314 48.81 0 332675..333637 + 320 15640346 - VC0319 - biotin--protein ligase 315 43.88 0 333687..334814 - 375 15640347 - VC0320 - pantothenate kinase 316 49.03 0 335326..336510 + 394 15640348 tuf VC0321 - elongation factor Tu 317 48.48 0 336719..337114 + 131 15640349 secE VC0322 - preprotein translocase subunit SecE 318 46.99 0 337130..337678 + 182 15640350 nusG VC0323 - transcription antitermination protein NusG 319 47.55 0 337809..338237 + 142 15640351 rplK VC0324 - 50S ribosomal protein L11 320 48.01 0 338242..338943 + 233 15640352 rplA VC0325 - 50S ribosomal protein L1 321 48.06 0 339213..339701 + 162 15640353 rplJ VC0326 - 50S ribosomal protein L10 322 45.08 0 339768..340133 + 121 15640354 rplL VC0327 - 50S ribosomal protein L7/L12 323 49.27 0 340272..344399 + 1375 15640355 rpoB VC0328 - DNA-directed RNA polymerase subunit beta 324 50.59 0 344504..348709 + 1401 15640356 - VC0329 - DNA-directed RNA polymerase subunit beta' 325 44.85 0 348820..349314 - 164 15640357 - VC0330 - anti-RNA polymerase sigma 70 factor 326 50.37 0 349459..350268 + 269 15640358 nudC VC0331 - NADH pyrophosphatase 327 50.56 0 350511..351590 + 359 15640359 hemE VC0332 - uroporphyrinogen decarboxylase 328 45.68 0 351596..352324 + 242 15640360 - VC0333 - TetR family transcriptional regulator 329 51.35 0 352411..353370 + 319 15640361 - VC0334 - hypothetical protein 330 48.56 0 353367..354515 - 382 15640362 - VC0335 - NlpD-related protein 331 51.08 0 354684..356216 - 510 15640363 - VC0336 - phosphoglyceromutase 332 52.44 +1 356359..357300 - 313 15640364 - VC0337 - hypothetical protein 333 50.24 0 357398..358834 - 478 15640365 - VC0338 - transporter, putative 334 52.45 +1 359021..359878 - 285 15640366 - VC0339 - phosphatidylserine decarboxylase 335 48.02 0 359871..361034 - 387 15640367 - VC0340 - ribosome-associated GTPase 336 45.60 0 361157..361702 + 181 15640368 - VC0341 - oligoribonuclease 337 48.38 0 363575..364684 - 369 15640369 - VC0342 - iron-sulfur cluster-binding protein 338 43.56 0 364787..365353 + 188 15640370 - VC0343 - hypothetical protein 339 47.48 0 365320..367065 + 581 15640371 - VC0344 - N-acetylmuramoyl-L-alanine amidase 340 50.36 0 367072..369033 + 653 15640372 mutL VC0345 - DNA mismatch repair protein 341 48.84 0 369030..369977 + 315 15640373 miaA VC0346 - tRNA delta(2)-isopentenylpyrophosphate transferase 342 46.59 0 370149..370412 + 87 15640374 hfq VC0347 - RNA-binding protein Hfq 343 48.06 0 370445..371734 + 429 15640375 - VC0348 - putative GTPase HflX 344 49.49 0 371780..372967 + 395 15640376 - VC0349 - hflK protein 345 46.89 0 372970..373950 + 326 15640377 - VC0350 - hflC protein 346 51.21 0 373993..374199 + 68 15640378 - VC0351 - hypothetical protein 347 44.74 0 374240..374467 - 75 161582027 - VC0352 - hypothetical protein 348 49.29 0 374470..375453 - 327 15640380 - VC0353 - hypothetical protein 349 46.92 0 375590..376369 + 259 15640381 - VC0354 - peptidyl-prolyl cis-trans isomerase, FKBP-type 350 46.20 0 376568..377290 + 240 15640382 - VC0355 - hypothetical protein 351 48.99 0 377287..377682 + 131 15640383 - VC0356 - hypothetical protein 352 46.78 0 377679..378035 + 118 15640384 - VC0357 - hypothetical protein 353 42.39 -1 378045..378320 + 91 15640385 - VC0358 - hypothetical protein 354 46.40 0 378505..378879 + 124 15640386 rpsL VC0359 - 30S ribosomal protein S12 355 46.28 0 378995..379465 + 156 15640387 - VC0360 - 30S ribosomal protein S7 356 47.73 0 379541..381637 + 698 15640388 - VC0361 - elongation factor G 357 49.11 0 381760..382944 + 394 15640389 tuf VC0362 - elongation factor Tu 358 44.14 0 383065..383175 - 36 15640390 - VC0363 - hypothetical protein 359 43.92 0 383247..383435 + 62 15640391 - VC0364 - bacterioferritin-associated ferredoxin 360 40.25 -1 383505..383981 + 158 15640392 - VC0365 - bacterioferritin 361 46.88 0 384193..384561 + 122 15640393 rpsF VC0366 - 30S ribosomal protein S6 362 45.54 0 384569..384871 + 100 15640394 - VC0367 - primosomal replication protein N 363 45.18 0 384887..385114 + 75 15640395 rpsR VC0368 - 30S ribosomal protein S18 364 46.00 0 385148..385597 + 149 15640396 rplI VC0369 - 50S ribosomal protein L9 365 43.33 0 385659..386468 - 269 15640397 - VC0370 - hypothetical protein 366 50.46 0 386594..388000 + 468 15640398 - VC0371 - replicative DNA helicase 367 52.39 +1 387972..389099 + 375 15640399 alr VC0372 - alanine racemase 368 48.10 0 389182..389601 - 139 15640400 - VC0373 - hypothetical protein 369 48.88 0 389886..391538 + 550 15640401 pgi VC0374 - glucose-6-phosphate isomerase 370 40.74 -1 391571..391678 - 35 15640402 - VC0375 - hypothetical protein 371 48.94 0 391741..392919 + 392 15640403 - VC0376 - hypothetical protein 372 47.40 0 393036..393497 - 153 15640404 - VC0377 - hypothetical protein 373 43.80 0 393507..393974 - 155 15640405 - VC0378 - zinc uptake regulation protein, putative 374 50.51 0 394329..395312 + 327 15640406 - VC0379 - tRNA-dihydrouridine synthase A 375 34.96 -2 395326..395448 - 40 15640407 - VC0380 - hypothetical protein 376 47.00 0 395774..396439 + 221 15640408 - VC0381 - hypothetical protein 377 35.67 -2 396393..396563 + 56 15640409 - VC0382 - hypothetical protein 378 46.30 0 396521..396790 + 89 15640410 - VC0383 - hypothetical protein 379 48.67 0 396876..398720 + 614 15640411 - VC0384 - sulfite reductase (NADPH) flavoprotein alpha-component 380 49.19 0 398720..400453 + 577 15640412 - VC0385 - sulfite reductase subunit beta 381 45.41 0 400446..401207 + 253 15640413 - VC0386 - phosphoadenosine phosphosulfate reductase 382 42.71 -1 401344..401439 + 31 15640414 - VC0387 - hypothetical protein 383 35.00 -2 401597..401716 + 39 15640415 - VC0388 - hypothetical protein 384 44.49 0 407506..408840 - 444 15640416 - VC0389 - Na+/H+ antiporter, putative 385 49.74 0 409037..412717 + 1226 15640417 metH VC0390 - B12-dependent methionine synthase 386 50.07 0 412790..414229 - 479 15640418 - VC0391 - aspartate kinase III 387 51.12 0 414609..415727 + 372 15640419 - VC0392 - aminotransferase, class V 388 48.22 0 415806..417599 - 597 15640420 - VC0393 - hypothetical protein 389 48.92 0 417655..420477 - 940 15640421 uvrA VC0394 - excinuclease ABC subunit A 390 48.06 0 420633..421508 - 291 15640422 - VC0395 - UTP--glucose-1-phosphate uridylyltransferase 391 43.72 0 421678..422322 - 214 15640423 - VC0396 - LuxR family transcriptional regulator 392 49.81 0 422614..423147 + 177 15640424 - VC0397 - single-strand DNA-binding protein 393 48.47 0 423262..425283 + 673 15640425 - VC0398 - regulatory protein CsrD 394 48.89 0 425296..426735 + 479 15640426 - VC0399 - MSHA biogenesis protein MshI 395 48.39 0 426732..427382 + 216 15640427 - VC0400 - MSHA biogenesis protein MshJ 396 50.00 0 427375..427692 + 105 15640428 - VC0401 - MSHA biogenesis protein MshK 397 47.74 0 427707..429386 + 559 15640429 - VC0402 - MSHA biogenesis protein MshL 398 50.00 0 429391..430236 + 281 15640430 - VC0403 - MSHA biogenesis protein MshM 399 50.43 0 430215..431384 + 389 15640431 - VC0404 - MSHA biogenesis protein MshN 400 50.06 0 431374..433101 + 575 15640432 - VC0405 - MSHA biogenesis protein MshE 401 48.94 0 433110..434333 + 407 15640433 - VC0406 - MSHA biogenesis protein MshG 402 46.80 0 434336..434788 + 150 15640434 - VC0407 - MSHA biogenesis protein MshF 403 47.38 0 434833..435423 + 196 15640435 - VC0408 - MSHA pilin protein MshB 404 43.02 -1 435449..435985 + 178 15640436 - VC0409 - MSHA pilin protein MshA 405 50.51 0 436022..436510 + 162 15640437 - VC0410 - MSHA pilin protein MshC 406 47.39 0 436458..437069 + 203 15640438 - VC0411 - MSHA pilin protein MshD 407 48.90 0 437069..437839 + 256 15640439 - VC0412 - hypothetical protein 408 48.38 0 437805..438236 + 143 15640440 - VC0413 - hypothetical protein 409 45.81 0 438229..441987 + 1252 15640441 - VC0414 - hypothetical protein 410 50.77 0 442155..443198 + 347 15640442 - VC0415 - rod shape-determining protein MreB 411 48.48 0 443255..444145 + 296 15640443 - VC0416 - rod shape-determining protein MreC 412 49.28 0 444132..444620 + 162 15640444 - VC0417 - rod shape-determining protein MreD 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0