version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2644 51.43 0 2842621..2843178 - 185 15642670 - VC2675 - ATP-dependent protease peptidase subunit 2645 51.99 +1 2843315..2843866 - 183 15642671 - VC2676 - cell division protein FtsN, putative 2646 52.48 +1 2844038..2845045 - 335 15642672 - VC2677 - DNA-binding transcriptional regulator CytR 2647 52.65 +1 2845351..2847555 - 734 15642673 - VC2678 - primosome assembly protein PriA 2648 47.03 0 2847810..2848028 + 72 15642674 rpmE VC2679 - 50S ribosomal protein L31 2649 38.89 -2 2848126..2848269 + 47 15642675 - VC2680 - hypothetical protein 2650 51.25 0 2848336..2849613 + 425 15642676 - VC2681 - malate oxidoreductase, putative 2651 47.80 0 2849724..2850041 - 105 15642677 - VC2682 - transcriptional repressor protein MetJ 2652 50.39 0 2850309..2851475 + 388 15642678 - VC2683 - cystathionine gamma-synthase 2653 52.16 +1 2851488..2853899 + 803 15642679 metL VC2684 - bifunctional aspartate kinase II/homoserine dehydrogenase II 2654 50.23 0 2854186..2855073 + 295 161581980 metF VC2685 - 5,10-methylenetetrahydrofolate reductase 2655 46.91 0 2855136..2855378 - 80 15642681 - VC2686 - hypothetical protein 2656 41.90 -1 2855427..2855531 + 34 15642682 - VC2687 - hypothetical protein 2657 52.98 +1 2855699..2856706 + 335 15642683 glpX VC2688 - fructose 1,6-bisphosphatase II 2658 49.30 0 2856783..2857778 - 331 15642684 pfkA VC2689 - 6-phosphofructokinase 2659 51.49 0 2858008..2858916 - 302 15642685 fieF VC2690 - ferrous iron efflux protein F 2660 51.39 0 2859114..2859617 - 167 15642686 cpxP VC2691 - periplasmic repressor CpxP 2661 51.53 0 2859805..2860491 + 228 15642687 - VC2692 - transcriptional regulator CpxR 2662 51.11 0 2860491..2861885 + 464 15642688 cpxA VC2693 - two-component sensor protein 2663 51.27 0 2861967..2862635 + 222 15642689 - VC2694 - superoxide dismutase, Mn 2664 51.78 +1 2862688..2863164 + 158 15642690 - VC2695 - rRNA methylase 2665 52.26 +1 2863198..2863683 - 161 15642691 fxsA VC2696 - FxsA 2666 49.09 0 2863775..2864713 - 312 15642692 - VC2697 - GGDEF family protein 2667 48.28 0 2864958..2866409 + 483 15642693 aspA VC2698 - aspartate ammonia-lyase 2668 52.45 +1 2866537..2867844 + 435 161581979 - VC2699 - anaerobic C4-dicarboxylate transporter 2669 51.75 +1 2871996..2873798 + 600 15642695 dipZ VC2701 - thiol:disulfide interchange protein precursor 2670 50.00 0 2873971..2874600 + 209 15642696 - VC2702 - LuxR family transcriptional regulator 2671 51.95 +1 2874699..2876444 - 581 15642697 - VC2703 - potassium/proton antiporter 2672 45.69 0 2876823..2877089 + 88 15642698 - VC2704 - hypothetical protein 2673 51.68 0 2877283..2878803 + 506 15642699 - VC2705 - sodium/solute symporter, putative 2674 47.92 0 2878901..2879572 - 223 15642700 - VC2706 - hypothetical protein 2675 45.74 0 2879759..2879887 + 42 15642701 - VC2707 - hypothetical protein 2676 46.23 0 2879875..2880564 + 229 15642702 gmk VC2708 - guanylate kinase 2677 52.01 +1 2880672..2880944 + 90 15642703 rpoZ VC2709 - DNA-directed RNA polymerase subunit omega 2678 52.41 +1 2880976..2883093 + 705 15642704 - VC2710 - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 2679 53.29 +1 2883212..2885290 + 692 15642705 - VC2711 - ATP-dependent DNA helicase RecG 2680 51.07 0 2885599..2887041 + 480 15642706 - VC2712 - xanthine/uracil permease family protein 2681 51.03 0 2887066..2888382 - 438 15642707 envZ VC2713 - osmolarity sensor protein 2682 51.18 0 2888451..2889173 - 240 15642708 ompR VC2714 - osmolarity response regulator 2683 48.77 0 2889311..2889796 - 161 15642709 greB VC2715 - transcription elongation factor GreB 2684 53.88 +1 2890041..2892362 + 773 15642710 - VC2716 - hypothetical protein 2685 54.22 +1 2892454..2892951 - 165 15642711 - VC2717 - hypothetical protein 2686 54.28 +1 2893086..2893892 - 268 15642712 - VC2718 - bioH protein 2687 53.77 +1 2893783..2894643 + 286 15642713 - VC2719 - ComF-related protein 2688 51.19 0 2894731..2895318 + 195 15642714 - VC2720 - putative DNA uptake protein 2689 49.54 0 2895457..2896005 + 182 161581978 nudE VC2721 - ADP-ribose diphosphatase NudE 2690 53.09 +1 2895950..2896855 + 301 15642716 - VC2722 - cysQ protein 2691 54.15 +1 2896907..2897665 - 252 15642717 - VC2723 - general secretion pathway protein N 2692 52.89 +1 2897667..2898167 - 166 15642718 - VC2724 - cholera toxin secretion protein EpsM 2693 51.14 0 2898174..2899397 - 407 15642719 - VC2725 - general secretion pathway protein L 2694 52.23 +1 2899354..2900364 - 336 15642720 - VC2726 - general secretion pathway protein K 2695 52.25 +1 2900354..2901019 - 221 15642721 - VC2727 - general secretion pathway protein J 2696 52.26 +1 2901006..2901359 - 117 15642722 - VC2728 - general secretion pathway protein I 2697 51.11 0 2901349..2901933 - 194 15642723 - VC2729 - general secretion pathway protein H 2698 47.85 0 2901967..2902407 - 146 15642724 - VC2730 - general secretion pathway protein G 2699 53.24 +1 2902448..2903668 - 406 15642725 - VC2731 - general secretion pathway protein F 2700 52.58 +1 2903668..2905179 - 503 15642726 - VC2732 - general secretion pathway protein E 2701 49.67 0 2907245..2908162 - 305 15642727 - VC2734 - general secretion pathway protein C 2702 50.52 0 2908386..2908769 + 127 15642728 - VC2735 - hypothetical protein 2703 49.61 0 2908788..2909678 + 296 15642729 hslO VC2736 - Hsp33-like chaperonin 2704 44.00 0 2909817..2909966 - 49 15642730 - VC2737 - hypothetical protein 2705 49.17 0 2910015..2911643 + 542 15642731 - VC2738 - phosphoenolpyruvate carboxykinase 2706 50.93 0 2911830..2913716 + 628 15642732 - VC2739 - hypothetical protein 2707 50.91 0 2913758..2914690 - 310 15642733 - VC2740 - hypothetical protein 2708 51.03 0 2914757..2915191 - 144 15642734 - VC2741 - D-tyrosyl-tRNA deacylase 2709 46.20 0 2915209..2916102 - 297 15642735 rbn VC2742 - ribonuclease BN 2710 49.01 0 2916129..2916683 - 184 15642736 - VC2743 - hypothetical protein 2711 49.84 0 2916766..2918595 - 609 15642737 - VC2744 - GTP-binding protein TypA 2712 43.21 0 2918615..2918938 - 107 15642738 - VC2745 - hypothetical protein 2713 48.58 0 2919083..2920492 + 469 15642739 glnA VC2746 - glutamine synthetase 2714 48.22 0 2920670..2921260 + 196 15642740 - VC2747 - hypothetical protein 2715 48.83 0 2921393..2922457 + 354 15642741 glnL VC2748 - nitrogen regulation protein NR(II) 2716 48.61 0 2922461..2923867 + 468 15642742 - VC2749 - nitrogen regulation protein NR(I) 2717 45.92 0 2923908..2926457 + 849 15642743 - VC2750 - GGDEF family protein 2718 49.15 0 2926549..2927553 + 334 15642744 - VC2751 - adenosine deaminase 2719 35.00 -2 2939035..2939154 - 39 15642745 - VC2752 - hypothetical protein 2720 41.84 -1 2939167..2939307 - 46 15642746 - VC2753 - hypothetical protein 2721 40.14 -1 2939334..2939480 - 48 15642747 - VC2754 - hypothetical protein 2722 45.90 0 2939455..2939979 - 174 15642748 hemG VC2755 - protoporphyrinogen oxidase 2723 48.90 0 2940002..2941459 - 485 15642749 - VC2756 - potassium uptake protein TrkH 2724 47.24 0 2941479..2942111 - 210 15642750 - VC2757 - hypothetical protein 2725 51.10 0 2942322..2944493 + 723 15642751 fadB VC2758 - multifunctional fatty acid oxidation complex subunit alpha 2726 53.78 +1 2944519..2945682 + 387 15642752 fadA VC2759 - 3-ketoacyl-CoA thiolase 2727 51.38 0 2945749..2946657 - 302 15642753 - VC2760 - putative DNA-binding transcriptional regulator 2728 49.46 0 2946813..2948015 + 400 161581977 - VC2761 - inner membrane transport protein YdhC 2729 51.32 0 2948077..2949438 - 453 15642755 glmU VC2762 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 2730 51.77 +1 2949685..2950107 - 140 15642756 atpC VC2763 - F0F1 ATP synthase subunit epsilon 2731 50.14 0 2950126..2951529 - 467 15642757 - VC2764 - F0F1 ATP synthase subunit beta 2732 47.75 0 2951564..2952430 - 288 15642758 - VC2765 - F0F1 ATP synthase subunit gamma 2733 49.43 0 2952475..2954046 - 523 15642759 - VC2766 - F0F1 ATP synthase subunit alpha 2734 46.82 0 2954030..2954563 - 177 15642760 - VC2767 - F0F1 ATP synthase subunit delta 2735 44.59 0 2954578..2955048 - 156 15642761 - VC2768 - F0F1 ATP synthase subunit B 2736 47.29 0 2955122..2955379 - 85 15642762 - VC2769 - F0F1 ATP synthase subunit C 2737 44.90 0 2955423..2956235 - 270 15642763 - VC2770 - F0F1 ATP synthase subunit A 2738 46.92 0 2956244..2956633 - 129 15642764 - VC2771 - F0F1 ATP synthase subunit I 2739 47.28 0 2956823..2957704 - 293 15642765 - VC2772 - ParB family protein 2740 47.42 0 2957731..2958504 - 257 15642766 - VC2773 - ParA family protein 2741 47.87 0 2958519..2959151 - 210 15642767 gidB VC2774 - glucose-inhibited division protein B 2742 49.84 0 2959151..2961046 - 631 15642768 - VC2775 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0