version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2554 41.19 -1 2758973..2759290 - 105 15642580 rplX VC2585 - 50S ribosomal protein L24 2555 47.31 0 2759303..2759674 - 123 15642581 rplN VC2586 - 50S ribosomal protein L14 2556 43.92 0 2759837..2760091 - 84 15642582 rpsQ VC2587 - 30S ribosomal protein S17 2557 46.35 0 2760091..2760282 - 63 15642583 rpmC VC2588 - 50S ribosomal protein L29 2558 47.69 0 2760282..2760692 - 136 15642584 rplP VC2589 - 50S ribosomal protein L16 2559 50.00 0 2760704..2761405 - 233 15642585 rpsC VC2590 - 30S ribosomal protein S3 2560 47.15 0 2761425..2761757 - 110 15642586 rplV VC2591 - 50S ribosomal protein L22 2561 45.16 0 2761768..2762046 - 92 15642587 rpsS VC2592 - 30S ribosomal protein S19 2562 51.39 0 2762067..2762891 - 274 15642588 rplB VC2593 - 50S ribosomal protein L2 2563 43.56 0 2762908..2763210 - 100 15642589 rplW VC2594 - 50S ribosomal protein L23 2564 46.60 0 2763207..2763809 - 200 15642590 rplD VC2595 - 50S ribosomal protein L4 2565 47.14 0 2763826..2764455 - 209 15642591 rplC VC2596 - 50S ribosomal protein L3 2566 46.79 0 2764470..2764781 - 103 15642592 rpsJ VC2597 - 30S ribosomal protein S10 2567 52.42 +1 2765252..2765995 - 247 15642593 - VC2598 - 23S rRNA (guanosine-2'-O-)-methyltransferase 2568 50.61 0 2766003..2768468 - 821 15642594 - VC2599 - ribonuclease R 2569 47.83 0 2768612..2770480 + 622 15642595 - VC2600 - hypothetical protein 2570 50.47 0 2770507..2771142 - 211 15642596 - VC2601 - sodium-type flagellar protein MotX 2571 48.96 0 2771350..2772648 - 432 15642597 - VC2602 - adenylosuccinate synthetase 2572 52.50 +1 2772776..2773756 - 326 15642598 - VC2603 - asparaginase, putative 2573 52.31 +1 2773919..2774524 - 201 15642599 - VC2604 - peptidyl-prolyl cis-trans isomerase, FKBP-type 2574 49.25 0 2774616..2774816 - 66 15642600 - VC2605 - hypothetical protein 2575 51.80 +1 2774826..2776628 - 600 161581984 - VC2606 - glutathione-regulated potassium-efflux system protein KefB 2576 51.10 0 2776609..2777199 - 196 15642602 - VC2607 - glutathione-regulated potassium-efflux system ancillary protein KefG 2577 51.18 0 2777245..2779239 + 664 15642603 - VC2608 - ABC transporter, ATP-binding protein 2578 46.91 0 2779240..2779725 + 161 15642604 - VC2609 - hypothetical protein 2579 52.63 +1 2779722..2780711 + 329 15642605 - VC2610 - putative hydrolase 2580 46.08 0 2780720..2780821 - 33 15642606 - VC2611 - hypothetical protein 2581 43.81 0 2780839..2781048 + 69 15642607 - VC2612 - hypothetical protein 2582 49.43 0 2781145..2782014 + 289 15642608 - VC2613 - phosphoribulokinase 2583 47.24 0 2782257..2782889 + 210 15642609 - VC2614 - cAMP-regulatory protein 2584 48.23 0 2782968..2783759 - 263 15642610 - VC2615 - hypothetical protein 2585 54.39 +1 2783902..2785359 - 485 15642611 - VC2616 - succinylglutamic semialdehyde dehydrogenase 2586 48.82 0 2785369..2786427 - 352 15642612 - VC2617 - arginine/ornithine succinyltransferase, putative 2587 51.16 0 2786528..2787739 - 403 15642613 argD VC2618 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 2588 49.14 0 2788137..2788718 - 193 15642614 - VC2619 - para-aminobenzoate synthase component II 2589 50.53 0 2788972..2790384 + 470 15642615 - VC2620 - hypothetical protein 2590 50.31 0 2790458..2793067 - 869 15642616 - VC2621 - extracellular nuclease-related protein 2591 48.32 0 2793337..2794110 - 257 15642617 - VC2622 - hypothetical protein 2592 49.16 0 2794267..2795283 - 338 161581983 - VC2623 - tryptophanyl-tRNA synthetase 2593 50.07 0 2795411..2796091 - 226 15642619 - VC2624 - phosphoglycolate phosphatase 2594 50.77 0 2796111..2796821 - 236 15642620 - VC2625 - ribulose-phosphate 3-epimerase 2595 48.32 0 2796912..2797745 - 277 15642621 - VC2626 - DNA adenine methylase 2596 48.44 0 2797815..2799290 - 491 15642622 - VC2627 - DamX-related protein 2597 50.77 0 2799345..2800445 - 366 15642623 aroB VC2628 - 3-dehydroquinate synthase 2598 47.24 0 2800458..2800982 - 174 15642624 aroK VC2629 - shikimate kinase I 2599 46.86 0 2801169..2802905 - 578 15642625 - VC2630 - fimbrial assembly protein 2600 49.13 0 2802910..2803428 - 172 15642626 - VC2631 - fimbrial assembly protein PilP, putative 2601 49.50 0 2803418..2804017 - 199 15642627 - VC2632 - fimbrial assembly protein PilO, putative 2602 47.21 0 2804001..2804591 - 196 15642628 - VC2633 - fimbrial assembly protein PilN, putative 2603 47.20 0 2804575..2805591 - 338 15642629 - VC2634 - fimbrial assembly protein PilM, putative 2604 49.60 0 2805704..2808211 + 835 15642630 - VC2635 - penicillin-binding protein 1A 2605 49.66 0 2808285..2809178 - 297 15642631 - VC2636 - DNA-binding transcriptional regulator OxyR 2606 46.91 0 2809306..2810049 + 247 15642632 - VC2637 - peroxiredoxin family protein/glutaredoxin 2607 51.27 0 2810121..2811575 + 484 15642633 - VC2638 - dihydrolipoamide dehydrogenase 2608 39.81 -1 2811572..2811679 - 35 15642634 - VC2639 - hypothetical protein 2609 46.21 0 2811801..2812064 + 87 15642635 - VC2640 - hypothetical protein 2610 50.18 0 2812315..2813691 - 458 15642636 - VC2641 - argininosuccinate lyase 2611 50.95 0 2813924..2815138 - 404 15642637 - VC2642 - argininosuccinate synthase 2612 53.61 +1 2815214..2816002 - 262 15642638 - VC2643 - acetylglutamate kinase 2613 50.60 0 2816012..2817013 - 333 161581982 argC VC2644 - N-acetyl-gamma-glutamyl-phosphate reductase 2614 50.31 0 2817169..2818305 + 378 15642640 - VC2645 - acetylornithine deacetylase 2615 50.59 0 2818512..2821142 + 876 161581981 - VC2646 - phosphoenolpyruvate carboxylase 2616 47.41 0 2821501..2822040 + 179 15642642 - VC2647 - hypothetical protein 2617 44.19 0 2821989..2822117 + 42 15642643 - VC2648 - hypothetical protein 2618 52.92 +1 2822156..2822977 - 273 15642644 cysE VC2649 - serine acetyltransferase 2619 47.76 0 2822864..2823175 + 103 15642645 - VC2650 - hypothetical protein 2620 51.79 +1 2823050..2824084 - 344 15642646 gpsA VC2651 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2621 48.54 0 2824217..2824387 + 56 15642647 - VC2652 - hypothetical protein 2622 49.68 0 2824274..2824738 - 154 15642648 - VC2653 - preprotein translocase subunit SecB 2623 45.29 0 2824905..2825339 - 144 15642649 - VC2654 - hypothetical protein 2624 48.67 0 2825469..2826518 - 349 15642650 - VC2655 - lysyl-tRNA synthetase 2625 49.97 0 2826752..2828560 + 602 15642651 - VC2656 - fumarate reductase flavoprotein subunit 2626 49.54 0 2828560..2829318 + 252 15642652 - VC2657 - fumarate reductase iron-sulfur subunit 2627 48.18 0 2829321..2829704 + 127 15642653 - VC2658 - fumarate reductase subunit C 2628 49.11 0 2829685..2830077 + 130 15642654 - VC2659 - fumarate reductase subunit D 2629 47.44 0 2830191..2830757 - 188 15642655 - VC2660 - elongation factor P 2630 48.88 0 2830790..2831812 + 340 15642656 - VC2661 - hypothetical protein 2631 45.66 0 2831849..2832424 - 191 15642657 - VC2662 - hypothetical protein 2632 38.10 -2 2832447..2832551 - 34 15642658 - VC2663 - hypothetical protein 2633 52.17 +1 2832620..2834254 - 544 15642659 groEL VC2664 - chaperonin GroEL 2634 44.67 0 2834308..2834598 - 96 15642660 groES VC2665 - co-chaperonin GroES 2635 50.97 0 2834958..2835575 + 205 15642661 - VC2666 - hypothetical protein 2636 52.22 +1 2835714..2836073 + 119 15642662 - VC2667 - hypothetical protein 2637 49.66 0 2836200..2836640 - 146 15642663 - VC2668 - hypothetical protein 2638 46.44 0 2836660..2837010 - 116 15642664 - VC2669 - 5-carboxymethyl-2-hydroxymuconate delta isomerase, putative 2639 50.75 0 2837230..2838027 + 265 15642665 tpiA VC2670 - triosephosphate isomerase 2640 52.13 +1 2838145..2839527 + 460 15642666 - VC2671 - hypothetical protein 2641 50.00 0 2839613..2840128 - 171 15642667 - VC2672 - ribonuclease activity regulator protein RraA 2642 49.67 0 2840203..2841120 - 305 15642668 - VC2673 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2643 50.30 0 2841224..2842555 - 443 15642669 hslU VC2674 - ATP-dependent protease ATP-binding subunit 2644 51.43 0 2842621..2843178 - 185 15642670 - VC2675 - ATP-dependent protease peptidase subunit 2645 51.99 +1 2843315..2843866 - 183 15642671 - VC2676 - cell division protein FtsN, putative 2646 52.48 +1 2844038..2845045 - 335 15642672 - VC2677 - DNA-binding transcriptional regulator CytR 2647 52.65 +1 2845351..2847555 - 734 15642673 - VC2678 - primosome assembly protein PriA 2648 47.03 0 2847810..2848028 + 72 15642674 rpmE VC2679 - 50S ribosomal protein L31 2649 38.89 -2 2848126..2848269 + 47 15642675 - VC2680 - hypothetical protein 2650 51.25 0 2848336..2849613 + 425 15642676 - VC2681 - malate oxidoreductase, putative 2651 47.80 0 2849724..2850041 - 105 15642677 - VC2682 - transcriptional repressor protein MetJ 2652 50.39 0 2850309..2851475 + 388 15642678 - VC2683 - cystathionine gamma-synthase 2653 52.16 +1 2851488..2853899 + 803 15642679 metL VC2684 - bifunctional aspartate kinase II/homoserine dehydrogenase II 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0