version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2384 52.20 +1 2582987..2584894 - 635 15642410 aceF VC2413 - dihydrolipoamide acetyltransferase 2385 50.66 0 2584895..2587555 - 886 15642411 aceE VC2414 - pyruvate dehydrogenase subunit E1 2386 49.81 0 2587605..2588375 - 256 15642412 pdhR VC2415 - transcriptional regulator PdhR 2387 46.09 0 2588859..2590763 + 634 15642413 - VC2416 - 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative 2388 51.49 0 2590808..2592547 - 579 161581988 - VC2417 - ssDNA exonuclease RecJ 2389 50.60 0 2592606..2593358 - 250 15642415 - VC2418 - thiol:disulfide interchange protein DsbC 2390 50.50 0 2593375..2594283 - 302 15642416 xerD VC2419 - site-specific tyrosine recombinase XerD 2391 49.33 0 2594421..2594939 + 172 161581987 - VC2420 - flavodoxin FldB 2392 53.85 +1 2595217..2595762 - 181 15642418 - VC2421 - N-acetyl-anhydromuranmyl-L-alanine amidase 2393 54.32 +1 2596058..2596948 + 296 15642419 - VC2422 - quinolinate phosphoribosyltransferase 2394 39.88 -1 2597151..2597654 + 167 15642420 - VC2423 - fimbrial protein 2395 52.81 +1 2597654..2599342 + 562 15642421 - VC2424 - type IV pilus assembly protein PilB 2396 49.06 0 2599385..2600611 + 408 15642422 - VC2425 - type IV pilin biogenesis protein PilC 2397 51.60 0 2600669..2601544 + 291 15642423 - VC2426 - leader peptidase PilD 2398 50.31 0 2601508..2602149 + 213 15642424 coaE VC2427 - dephospho-CoA kinase 2399 49.53 0 2602181..2602921 + 246 15642425 - VC2428 - hypothetical protein 2400 49.49 0 2603063..2603260 + 65 15642426 - VC2429 - zinc-binding protein 2401 52.14 +1 2603309..2605594 - 761 15642427 - VC2430 - DNA topoisomerase IV subunit A 2402 52.74 +1 2605598..2607478 - 626 15642428 - VC2431 - DNA topoisomerase IV subunit B 2403 49.32 0 2607807..2608394 - 195 15642429 - VC2432 - esterase YqiA 2404 51.04 0 2608396..2609214 - 272 15642430 - VC2433 - cyclic 3',5'-adenosine monophosphate phosphodiesterase 2405 47.65 0 2609239..2609685 - 148 15642431 - VC2434 - hypothetical protein 2406 46.73 0 2609692..2610318 - 208 15642432 - VC2435 - MutT/nudix family protein 2407 48.75 0 2610550..2611866 + 438 15642433 tolC VC2436 - outer membrane channel protein 2408 51.74 +1 2613465..2616311 - 948 15642434 - VC2438 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 2409 50.08 0 2616435..2617736 - 433 15642435 - VC2439 - methyl-accepting chemotaxis protein 2410 49.54 0 2618176..2619693 - 505 15642436 - VC2440 - hypothetical protein 2411 46.00 0 2619893..2620579 + 228 15642437 - VC2441 - hypothetical protein 2412 49.69 0 2620683..2621984 + 433 15642438 - VC2442 - pho4 family protein 2413 47.95 0 2622151..2622759 + 202 15642439 - VC2443 - hypothetical protein 2414 49.81 0 2622851..2623621 - 256 15642440 - VC2444 - general secretion pathway protein B, putative 2415 52.01 +1 2623621..2625210 - 529 15642441 - VC2445 - general secretion pathway protein A 2416 54.29 +1 2625303..2626514 + 403 15642442 cca VC2446 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 2417 48.00 0 2626616..2627917 - 433 15642443 eno VC2447 - phosphopyruvate hydratase 2418 49.57 0 2627996..2629633 - 545 15642444 - VC2448 - CTP synthetase 2419 35.46 -2 2629719..2629859 + 46 15642445 - VC2449 - hypothetical protein 2420 47.92 0 2629908..2630723 - 271 161581986 mazG VC2450 - nucleoside triphosphate pyrophosphohydrolase 2421 52.10 +1 2630823..2633039 - 738 15642447 - VC2451 - GTP pyrophosphokinase 2422 50.42 0 2633103..2634425 - 440 15642448 rumA VC2452 - 23S rRNA 5-methyluridine methyltransferase 2423 50.61 0 2634597..2637380 + 927 15642449 - VC2453 - hybrid sensory histidine kinase BarA 2424 47.49 0 2637368..2638660 - 430 15642450 - VC2454 - GGDEF family protein 2425 47.45 0 2638653..2639063 - 136 15642451 - VC2455 - hypothetical protein 2426 49.18 0 2639073..2640410 - 445 15642452 - VC2456 - hypothetical protein 2427 50.13 0 2640613..2640993 - 126 15642453 acpS VC2457 - 4'-phosphopantetheinyl transferase 2428 51.23 0 2640997..2641728 - 243 15642454 - VC2458 - pyridoxal phosphate biosynthetic protein PdxJ 2429 51.10 0 2641725..2642450 - 241 15642455 recO VC2459 - DNA repair protein RecO 2430 48.67 0 2642520..2643497 - 325 15642456 era VC2460 - GTP-binding protein Era 2431 50.15 0 2643490..2644167 - 225 15642457 rnc VC2461 - ribonuclease III 2432 49.16 0 2644199..2645095 - 298 15642458 - VC2462 - signal peptidase I 2433 50.67 0 2645187..2646980 - 597 15642459 - VC2463 - GTP-binding protein LepA 2434 51.38 0 2647093..2647563 - 156 15642460 - VC2464 - sigma-E factor regulatory protein RseC 2435 49.69 0 2647560..2648525 - 321 15642461 rseB VC2465 - periplasmic negative regulator of sigmaE 2436 49.61 0 2648522..2649160 - 212 15642462 - VC2466 - sigma-E factor negative regulatory protein RseA 2437 44.85 0 2649174..2649746 - 190 15642463 - VC2467 - RNA polymerase sigma factor RpoE 2438 40.40 -1 2650077..2650274 - 65 15642464 - VC2468 - hypothetical protein 2439 50.82 0 2650206..2651858 + 550 15642465 - VC2469 - L-aspartate oxidase 2440 49.66 0 2651883..2652329 - 148 15642466 - VC2470 - hypothetical protein 2441 48.28 0 2652277..2652537 - 86 15642467 - VC2471 - hypothetical protein 2442 51.03 0 2652690..2653661 + 323 15642468 - VC2472 - hypothetical protein 2443 44.02 0 2654268..2654501 + 77 15642469 - VC2473 - hypothetical protein 2444 53.17 +1 2654602..2655831 - 409 15642470 - VC2474 - 2-octaprenyl-6-methoxyphenol hydroxylase 2445 53.10 +1 2655843..2657051 - 402 15642471 - VC2475 - 2-octaprenyl-6-methoxyphenyl hydroxylase 2446 47.89 0 2657072..2657545 - 157 15642472 - VC2476 - hypothetical protein 2447 46.88 0 2657551..2657646 - 31 15642473 - VC2477 - hypothetical protein 2448 45.31 0 2657888..2658196 + 102 15642474 - VC2478 - hypothetical protein 2449 50.77 0 2658396..2658980 + 194 15642475 - VC2479 - hypothetical protein 2450 49.47 0 2659090..2659746 + 218 15642476 - VC2480 - ribose-5-phosphate isomerase A 2451 49.19 0 2660000..2661229 + 409 15642477 - VC2481 - D-3-phosphoglycerate dehydrogenase 2452 49.90 0 2661461..2661955 - 164 15642478 - VC2482 - acetolactate synthase 3 regulatory subunit 2453 47.91 0 2661957..2663678 - 573 15642479 - VC2483 - acetolactate synthase 3 catalytic subunit 2454 46.35 0 2664163..2665968 - 601 15642480 - VC2484 - long-chain-fatty-acid--CoA ligase, putative 2455 47.72 0 2666145..2667110 - 321 15642481 leuO VC2485 - leucine transcriptional activator 2456 40.20 -1 2667128..2667229 - 33 15642482 - VC2486 - hypothetical protein 2457 43.16 -1 2667410..2668498 - 362 15642483 - VC2487 - hypothetical protein 2458 47.67 0 2668495..2669031 - 178 15642484 - VC2488 - hypothetical protein 2459 42.61 -1 2669158..2669793 - 211 15642485 - VC2489 - TetR family transcriptional regulator 2460 48.03 0 2670176..2671726 + 516 15642486 - VC2490 - 2-isopropylmalate synthase 2461 51.19 0 2671838..2672929 + 363 15642487 - VC2491 - 3-isopropylmalate dehydrogenase 2462 51.07 0 2672987..2674390 + 467 15642488 - VC2492 - isopropylmalate isomerase large subunit 2463 47.10 0 2674406..2675008 + 200 15642489 leuD VC2493 - isopropylmalate isomerase small subunit 2464 42.55 -1 2675109..2675900 + 263 15642490 - VC2494 - hypothetical protein 2465 35.00 -2 2681453..2681572 - 39 15642491 - VC2495 - hypothetical protein 2466 37.63 -2 2681585..2681677 - 30 15642492 - VC2496 - hypothetical protein 2467 43.94 0 2681920..2683173 - 417 15642493 - VC2497 - hypothetical protein 2468 49.28 0 2683604..2684086 + 160 15642494 - VC2498 - hypothetical protein 2469 47.06 0 2684192..2685262 - 356 15642495 - VC2499 - hypothetical protein 2470 46.50 0 2685266..2686366 - 366 15642496 - VC2500 - hypothetical protein 2471 50.60 0 2686560..2688071 + 503 15642497 - VC2501 - leucyl aminopeptidase 2472 50.44 0 2688155..2688604 + 149 15642498 - VC2502 - DNA polymerase III subunit chi 2473 50.77 0 2688698..2691559 + 953 15642499 valS VC2503 - valyl-tRNA synthetase 2474 51.02 0 2691637..2692614 - 325 15642500 - VC2504 - D-lactate dehydrogenase 2475 49.73 0 2692654..2693391 - 245 15642501 - VC2505 - ribosomal large subunit pseudouridine synthase A 2476 51.82 +1 2693488..2696397 - 969 15642502 - VC2506 - ATP-dependent helicase HepA 2477 51.13 0 2696819..2698195 + 458 15642503 - VC2507 - hypothetical protein 2478 49.35 0 2698345..2699349 + 334 15642504 - VC2508 - ornithine carbamoyltransferase 2479 43.75 0 2699447..2699542 + 31 15642505 - VC2509 - hypothetical protein 2480 49.75 0 2699536..2700528 + 330 15642506 pyrB VC2510 - aspartate carbamoyltransferase catalytic subunit 2481 47.65 0 2700540..2701007 + 155 15642507 - VC2511 - aspartate carbamoyltransferase regulatory subunit 2482 50.51 0 2701112..2701501 + 129 15642508 - VC2512 - hypothetical protein 2483 49.75 0 2701582..2702367 - 261 15642509 - VC2513 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0