version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2301 53.39 +1 2479033..2480064 + 343 15642327 - VC2329 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2302 51.65 0 2480146..2481390 - 414 15642328 - VC2330 - hypothetical protein 2303 34.26 -2 2481353..2481460 - 35 15642329 - VC2331 - hypothetical protein 2304 49.18 0 2481493..2482584 - 363 15642330 - VC2332 - acetyltransferase 2305 49.10 0 2482789..2484240 + 483 15642331 - VC2333 - ribosomal protein S6 modification protein-related protein 2306 48.17 0 2484430..2485413 + 327 15642332 - VC2334 - hypothetical protein 2307 49.66 0 2485397..2485984 + 195 15642333 - VC2335 - hypothetical protein 2308 50.14 0 2485981..2486325 - 114 15642334 - VC2336 - hypothetical protein 2309 51.69 0 2486484..2487491 + 335 15642335 - VC2337 - LacI family transcription regulator 2310 51.27 0 2490959..2492101 + 380 15642336 - VC2339 - chromate resistance protein-related protein 2311 45.89 0 2492237..2493391 + 384 15642337 - VC2340 - hypothetical protein 2312 46.75 0 2493591..2495282 + 563 15642338 - VC2341 - long-chain-fatty-acid--CoA ligase, putative 2313 47.13 0 2495396..2497483 - 695 15642339 - VC2342 - elongation factor G 2314 49.28 0 2497754..2499133 - 459 15642340 - VC2343 - DNA repair protein RadA 2315 47.31 0 2499261..2501600 + 779 15642341 - VC2344 - hypothetical protein 2316 49.44 0 2501805..2502791 - 328 15642342 serB VC2345 - phosphoserine phosphatase 2317 44.98 0 2502825..2503511 + 228 15642343 - VC2346 - smp protein, putative 2318 48.76 0 2503591..2504316 - 241 15642344 deoD VC2347 - purine nucleoside phosphorylase 2319 50.53 0 2504399..2505619 - 406 15642345 - VC2348 - phosphopentomutase 2320 52.41 +1 2505637..2506983 - 448 161581990 deoA VC2349 - thymidine phosphorylase 2321 48.46 0 2507071..2507850 - 259 15642347 - VC2350 - deoxyribose-phosphate aldolase 2322 49.21 0 2507952..2508140 + 62 15642348 - VC2351 - hypothetical protein 2323 48.77 0 2508452..2509708 - 418 15642349 - VC2352 - NupC family protein 2324 50.35 0 2509895..2510746 - 283 15642350 - VC2353 - hypothetical protein 2325 48.61 0 2510691..2510834 - 47 15642351 - VC2354 - hypothetical protein 2326 45.35 0 2510861..2511634 - 257 15642352 - VC2355 - hypothetical protein 2327 48.71 0 2511798..2513228 - 476 15642353 - VC2356 - sodium/alanine symporter 2328 41.88 -1 2513867..2514100 + 77 15642354 - VC2357 - hypothetical protein 2329 42.68 -1 2514244..2514885 - 213 15642355 - VC2358 - hypothetical protein 2330 48.75 0 2514885..2515565 - 226 15642356 - VC2359 - uracil-DNA glycosylase 2331 47.85 0 2515934..2516794 - 286 15642357 - VC2360 - endonuclease IV 2332 47.88 0 2517140..2517517 + 125 15642358 - VC2361 - autonomous glycyl radical cofactor GrcA 2333 49.73 0 2517597..2518877 - 426 15642359 - VC2362 - threonine synthase 2334 52.04 +1 2518874..2519830 - 318 15642360 - VC2363 - homoserine kinase 2335 50.08 0 2519851..2522328 - 825 15642361 thrA VC2364 - bifunctional aspartokinase I/homeserine dehydrogenase I 2336 47.20 0 2522858..2523340 + 160 15642362 - VC2365 - hypothetical protein 2337 44.58 0 2523337..2523825 - 162 15642363 - VC2366 - ribonuclease activity regulator protein RraA 2338 44.01 0 2523852..2524235 - 127 15642364 - VC2367 - hypothetical protein 2339 47.56 0 2524550..2525266 + 238 15642365 - VC2368 - two-component response regulator 2340 46.90 0 2525325..2527682 - 785 15642366 - VC2369 - aerobic respiration control sensor protein ArcB 2341 49.43 0 2527789..2529528 - 579 15642367 - VC2370 - sensory box/GGDEF family protein 2342 50.05 0 2529596..2530546 - 316 15642368 - VC2371 - hypothetical protein 2343 31.67 -2 2530568..2530687 - 39 15642369 - VC2372 - hypothetical protein 2344 51.99 +1 2531065..2535657 + 1530 15642370 - VC2373 - glutamate synthase, large subunit 2345 52.38 +1 2535658..2537127 + 489 15642371 gltD VC2374 - glutamate synthase subunit beta 2346 43.24 0 2537161..2537271 + 36 15642372 - VC2375 - hypothetical protein 2347 53.00 +1 2537655..2542118 + 1487 15642373 gltB VC2376 - glutamate synthase subunit alpha 2348 52.61 +1 2542134..2543549 + 471 15642374 gltD VC2377 - glutamate synthase subunit beta 2349 50.57 0 2543736..2544170 + 144 15642375 - VC2378 - hypothetical protein 2350 49.86 0 2544258..2544953 + 231 15642376 - VC2379 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2351 52.10 +1 2544966..2545919 + 317 15642377 - VC2380 - adenosylcobinamide-phosphate synthase 2352 50.78 0 2545920..2546750 + 276 15642378 - VC2381 - hypothetical protein 2353 52.08 +1 2546734..2547453 + 239 15642379 - VC2382 - hypothetical protein 2354 51.57 0 2547605..2548465 + 286 15642380 - VC2383 - LysR family transcriptional regulator 2355 51.65 0 2548395..2549180 - 261 15642381 - VC2384 - hypothetical protein 2356 31.89 -2 2549642..2550613 + 323 15642382 - VC2385 - RNA-directed DNA polymerase 2357 30.68 -2 2550614..2552236 + 540 15642383 - VC2386 - hypothetical protein 2358 30.10 -2 2552249..2552866 + 205 15642384 - VC2387 - hypothetical protein 2359 48.24 0 2553477..2553959 + 160 15642385 - VC2388 - hypothetical protein 2360 51.81 +1 2554049..2557279 - 1076 15642386 carB VC2389 - carbamoyl phosphate synthase large subunit 2361 50.35 0 2557296..2558435 - 379 15642387 - VC2390 - carbamoyl phosphate synthase small subunit 2362 50.62 0 2558918..2559727 - 269 15642388 - VC2391 - dihydrodipicolinate reductase 2363 49.12 0 2559842..2560240 - 132 15642389 - VC2392 - mutator MutT protein 2364 43.45 0 2560226..2560393 + 55 15642390 - VC2393 - hypothetical protein 2365 48.97 0 2560390..2563101 - 903 15642391 secA VC2394 - preprotein translocase subunit SecA 2366 48.73 0 2563455..2563928 + 157 15642392 - VC2395 - hypothetical protein 2367 47.17 0 2564032..2564949 - 305 15642393 lpxC VC2396 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2368 49.29 0 2565047..2566243 - 398 15642394 - VC2397 - cell division protein FtsZ 2369 48.61 0 2566274..2567536 - 420 15642395 ftsA VC2398 - cell division protein FtsA 2370 41.76 -1 2567529..2568311 - 260 15642396 - VC2399 - cell division protein FtsQ 2371 50.69 0 2568493..2570013 - 506 15642397 murC VC2400 - UDP-N-acetylmuramate--L-alanine ligase 2372 52.86 +1 2569967..2571031 - 354 15642398 murG VC2401 - N-acetylglucosaminyl transferase 2373 48.29 0 2571015..2572211 - 398 15642399 - VC2402 - cell division protein FtsW 2374 50.41 0 2572228..2573562 - 444 161581989 murD VC2403 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2375 49.77 0 2573574..2574656 - 360 15642401 mraY VC2404 - phospho-N-acetylmuramoyl-pentapeptide-transferase 2376 50.66 0 2574653..2576014 - 453 15642402 - VC2405 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 2377 52.76 +1 2576011..2577549 - 512 15642403 murE VC2406 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 2378 51.46 0 2577515..2579257 - 580 15642404 - VC2407 - penicillin-binding protein 3 2379 48.60 0 2579254..2579574 - 106 15642405 - VC2408 - cell division protein FtsL 2380 50.26 0 2579584..2580534 - 316 15642406 mraW VC2409 - S-adenosyl-methyltransferase MraW 2381 50.98 0 2581102..2581203 - 33 15642407 - VC2410 - hypothetical protein 2382 38.52 -2 2581198..2581332 + 44 15642408 - VC2411 - hypothetical protein 2383 49.44 0 2581292..2582719 - 475 15642409 - VC2412 - dihydrolipoamide dehydrogenase 2384 52.20 +1 2582987..2584894 - 635 15642410 aceF VC2413 - dihydrolipoamide acetyltransferase 2385 50.66 0 2584895..2587555 - 886 15642411 aceE VC2414 - pyruvate dehydrogenase subunit E1 2386 49.81 0 2587605..2588375 - 256 15642412 pdhR VC2415 - transcriptional regulator PdhR 2387 46.09 0 2588859..2590763 + 634 15642413 - VC2416 - 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative 2388 51.49 0 2590808..2592547 - 579 161581988 - VC2417 - ssDNA exonuclease RecJ 2389 50.60 0 2592606..2593358 - 250 15642415 - VC2418 - thiol:disulfide interchange protein DsbC 2390 50.50 0 2593375..2594283 - 302 15642416 xerD VC2419 - site-specific tyrosine recombinase XerD 2391 49.33 0 2594421..2594939 + 172 161581987 - VC2420 - flavodoxin FldB 2392 53.85 +1 2595217..2595762 - 181 15642418 - VC2421 - N-acetyl-anhydromuranmyl-L-alanine amidase 2393 54.32 +1 2596058..2596948 + 296 15642419 - VC2422 - quinolinate phosphoribosyltransferase 2394 39.88 -1 2597151..2597654 + 167 15642420 - VC2423 - fimbrial protein 2395 52.81 +1 2597654..2599342 + 562 15642421 - VC2424 - type IV pilus assembly protein PilB 2396 49.06 0 2599385..2600611 + 408 15642422 - VC2425 - type IV pilin biogenesis protein PilC 2397 51.60 0 2600669..2601544 + 291 15642423 - VC2426 - leader peptidase PilD 2398 50.31 0 2601508..2602149 + 213 15642424 coaE VC2427 - dephospho-CoA kinase 2399 49.53 0 2602181..2602921 + 246 15642425 - VC2428 - hypothetical protein 2400 49.49 0 2603063..2603260 + 65 15642426 - VC2429 - zinc-binding protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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