version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2247 47.44 0 2429515..2429904 - 129 15642273 - VC2275 - DNA-binding transcriptional regulator Crl 2248 48.40 0 2430038..2431285 - 415 15642274 frsA VC2276 - fermentation/respiration switch protein 2249 47.74 0 2431382..2431846 - 154 15642275 - VC2277 - xanthine-guanine phosphoribosyltransferase 2250 49.34 0 2431884..2433176 - 430 15642276 - VC2278 - hypothetical protein 2251 48.72 0 2433923..2435527 + 534 15642277 - VC2279 - aminoacyl-histidine dipeptidase 2252 46.40 0 2435761..2436204 + 147 15642278 - VC2280 - hypothetical protein 2253 50.22 0 2436201..2437106 + 301 15642279 - VC2281 - ribosomal protein S6 modification protein 2254 48.85 0 2437066..2438154 + 362 15642280 - VC2282 - hypothetical protein 2255 48.30 0 2438223..2439578 - 451 15642281 - VC2283 - sodium-dependent transporter 2256 30.39 -2 2439637..2439738 + 33 15642282 - VC2284 - hypothetical protein 2257 44.60 0 2439735..2441252 - 505 15642283 - VC2285 - GGDEF family protein 2258 43.19 0 2441316..2442086 - 256 15642284 - VC2286 - hypothetical protein 2259 47.00 0 2442332..2443414 - 360 15642285 - VC2287 - DNA polymerase IV 2260 49.57 0 2443523..2443756 - 77 15642286 - VC2288 - hypothetical protein 2261 46.01 0 2443773..2444876 - 367 15642287 - VC2289 - thiamin biosynthesis lipoprotein ApbE 2262 46.94 0 2444923..2446149 - 408 15642288 - VC2290 - Na(+)-translocating NADH-quinone reductase subunit F 2263 46.06 0 2446183..2446779 - 198 15642289 - VC2291 - Na(+)-translocating NADH-quinone reductase subunit E 2264 45.34 0 2446787..2447419 - 210 15642290 - VC2292 - Na(+)-translocating NADH-quinone reductase subunit D 2265 47.03 0 2447419..2448192 - 257 15642291 - VC2293 - Na(+)-translocating NADH-quinone reductase subunit C 2266 49.69 0 2448179..2449462 - 427 15642292 - VC2294 - Na(+)-translocating NADH-quinone reductase subunit B 2267 48.45 0 2449432..2450820 - 462 15642293 - VC2295 - Na(+)-translocating NADH-quinone reductase subunit A 2268 47.66 0 2451257..2451577 - 106 15642294 - VC2296 - bolA protein 2269 45.32 0 2451622..2452872 + 416 15642295 - VC2297 - hypothetical protein 2270 46.22 0 2452869..2453489 + 206 15642296 - VC2298 - putative lipoprotein 2271 48.55 0 2453446..2454030 + 194 15642297 - VC2299 - peptidyl-prolyl cis-trans isomerase A 2272 47.88 0 2454099..2455487 + 462 15642298 - VC2300 - ampG protein, putative 2273 48.75 0 2455575..2456255 - 226 15642299 - VC2301 - transcriptional activator, putative 2274 46.15 0 2456252..2456836 - 194 15642300 - VC2302 - RNA polymerase sigma factor 2275 45.02 0 2456927..2457508 - 193 15642301 - VC2303 - hypothetical protein 2276 26.13 -2 2457577..2457687 + 36 15642302 - VC2304 - hypothetical protein 2277 43.43 0 2457746..2458636 + 296 15642303 - VC2305 - outer membrane protein OmpK 2278 41.94 -1 2458633..2458725 - 30 15642304 - VC2306 - hypothetical protein 2279 49.94 0 2458775..2459665 + 296 15642305 - VC2307 - 2-dehydropantoate 2-reductase 2280 54.85 +1 2459650..2460267 + 205 15642306 - VC2308 - 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme 2281 52.35 +1 2460251..2461465 + 404 15642307 - VC2309 - aminotransferase, class V 2282 51.03 0 2461535..2461969 - 144 15642308 - VC2310 - hypothetical protein 2283 49.27 0 2461974..2462795 - 273 15642309 - VC2311 - HesA/MoeB/ThiF family protein 2284 49.59 0 2462887..2463993 - 368 15642310 mltA VC2312 - murein transglycosylase A 2285 42.34 -1 2463957..2464067 + 36 15642311 - VC2313 - hypothetical protein 2286 43.70 0 2464064..2464468 - 134 15642312 - VC2314 - hypothetical protein 2287 37.50 -2 2464517..2464612 - 31 15642313 - VC2315 - hypothetical protein 2288 49.74 0 2464704..2466074 + 456 15642314 - VC2316 - N-acetylglutamate synthase 2289 33.33 -2 2466048..2466212 - 54 15642315 - VC2317 - hypothetical protein 2290 44.62 0 2466301..2466486 + 61 15642316 - VC2318 - hypothetical protein 2291 52.52 +1 2466516..2468636 - 706 15642317 - VC2319 - exodeoxyribonuclease V, 67 kDa subunit 2292 54.04 +1 2468633..2472259 - 1208 15642318 - VC2320 - exodeoxyribonuclease V, 135 kDa subunit 2293 50.98 0 2472416..2472517 - 33 15642319 - VC2321 - hypothetical protein 2294 52.74 +1 2472524..2475970 - 1148 15642320 recC VC2322 - exonuclease V subunit gamma 2295 53.56 +1 2476209..2477177 - 322 15642321 - VC2323 - hypothetical protein 2296 49.62 0 2477288..2478202 + 304 15642322 - VC2324 - LysR family transcriptional regulator 2297 49.55 0 2478157..2478267 + 36 15642323 - VC2325 - hypothetical protein 2298 50.49 0 2478318..2478626 + 102 15642324 - VC2326 - hypothetical protein 2299 44.44 0 2478627..2478725 - 32 15642325 - VC2327 - hypothetical protein 2300 45.45 0 2478920..2479051 + 43 15642326 - VC2328 - hypothetical protein 2301 53.39 +1 2479033..2480064 + 343 15642327 - VC2329 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2302 51.65 0 2480146..2481390 - 414 15642328 - VC2330 - hypothetical protein 2303 34.26 -2 2481353..2481460 - 35 15642329 - VC2331 - hypothetical protein 2304 49.18 0 2481493..2482584 - 363 15642330 - VC2332 - acetyltransferase 2305 49.10 0 2482789..2484240 + 483 15642331 - VC2333 - ribosomal protein S6 modification protein-related protein 2306 48.17 0 2484430..2485413 + 327 15642332 - VC2334 - hypothetical protein 2307 49.66 0 2485397..2485984 + 195 15642333 - VC2335 - hypothetical protein 2308 50.14 0 2485981..2486325 - 114 15642334 - VC2336 - hypothetical protein 2309 51.69 0 2486484..2487491 + 335 15642335 - VC2337 - LacI family transcription regulator 2310 51.27 0 2490959..2492101 + 380 15642336 - VC2339 - chromate resistance protein-related protein 2311 45.89 0 2492237..2493391 + 384 15642337 - VC2340 - hypothetical protein 2312 46.75 0 2493591..2495282 + 563 15642338 - VC2341 - long-chain-fatty-acid--CoA ligase, putative 2313 47.13 0 2495396..2497483 - 695 15642339 - VC2342 - elongation factor G 2314 49.28 0 2497754..2499133 - 459 15642340 - VC2343 - DNA repair protein RadA 2315 47.31 0 2499261..2501600 + 779 15642341 - VC2344 - hypothetical protein 2316 49.44 0 2501805..2502791 - 328 15642342 serB VC2345 - phosphoserine phosphatase 2317 44.98 0 2502825..2503511 + 228 15642343 - VC2346 - smp protein, putative 2318 48.76 0 2503591..2504316 - 241 15642344 deoD VC2347 - purine nucleoside phosphorylase 2319 50.53 0 2504399..2505619 - 406 15642345 - VC2348 - phosphopentomutase 2320 52.41 +1 2505637..2506983 - 448 161581990 deoA VC2349 - thymidine phosphorylase 2321 48.46 0 2507071..2507850 - 259 15642347 - VC2350 - deoxyribose-phosphate aldolase 2322 49.21 0 2507952..2508140 + 62 15642348 - VC2351 - hypothetical protein 2323 48.77 0 2508452..2509708 - 418 15642349 - VC2352 - NupC family protein 2324 50.35 0 2509895..2510746 - 283 15642350 - VC2353 - hypothetical protein 2325 48.61 0 2510691..2510834 - 47 15642351 - VC2354 - hypothetical protein 2326 45.35 0 2510861..2511634 - 257 15642352 - VC2355 - hypothetical protein 2327 48.71 0 2511798..2513228 - 476 15642353 - VC2356 - sodium/alanine symporter 2328 41.88 -1 2513867..2514100 + 77 15642354 - VC2357 - hypothetical protein 2329 42.68 -1 2514244..2514885 - 213 15642355 - VC2358 - hypothetical protein 2330 48.75 0 2514885..2515565 - 226 15642356 - VC2359 - uracil-DNA glycosylase 2331 47.85 0 2515934..2516794 - 286 15642357 - VC2360 - endonuclease IV 2332 47.88 0 2517140..2517517 + 125 15642358 - VC2361 - autonomous glycyl radical cofactor GrcA 2333 49.73 0 2517597..2518877 - 426 15642359 - VC2362 - threonine synthase 2334 52.04 +1 2518874..2519830 - 318 15642360 - VC2363 - homoserine kinase 2335 50.08 0 2519851..2522328 - 825 15642361 thrA VC2364 - bifunctional aspartokinase I/homeserine dehydrogenase I 2336 47.20 0 2522858..2523340 + 160 15642362 - VC2365 - hypothetical protein 2337 44.58 0 2523337..2523825 - 162 15642363 - VC2366 - ribonuclease activity regulator protein RraA 2338 44.01 0 2523852..2524235 - 127 15642364 - VC2367 - hypothetical protein 2339 47.56 0 2524550..2525266 + 238 15642365 - VC2368 - two-component response regulator 2340 46.90 0 2525325..2527682 - 785 15642366 - VC2369 - aerobic respiration control sensor protein ArcB 2341 49.43 0 2527789..2529528 - 579 15642367 - VC2370 - sensory box/GGDEF family protein 2342 50.05 0 2529596..2530546 - 316 15642368 - VC2371 - hypothetical protein 2343 31.67 -2 2530568..2530687 - 39 15642369 - VC2372 - hypothetical protein 2344 51.99 +1 2531065..2535657 + 1530 15642370 - VC2373 - glutamate synthase, large subunit 2345 52.38 +1 2535658..2537127 + 489 15642371 gltD VC2374 - glutamate synthase subunit beta 2346 43.24 0 2537161..2537271 + 36 15642372 - VC2375 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0