version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2142 39.64 -1 2316596..2316706 - 36 15642169 - VC2170 - hypothetical protein 2143 52.39 +1 2316680..2317933 + 417 15642170 - VC2171 - uracil permease 2144 47.20 0 2318004..2318486 - 160 15642171 - VC2172 - hypothetical protein 2145 49.55 0 2318504..2318614 - 36 15642172 - VC2173 - hypothetical protein 2146 48.19 0 2318621..2320282 - 553 15642173 ushA VC2174 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 2147 50.47 0 2320824..2321675 - 283 15642174 - VC2175 - 2-dehydro-3-deoxyphosphooctonate aldolase 2148 47.48 0 2321695..2322507 - 270 15642175 - VC2176 - hypothetical protein 2149 46.09 0 2322523..2322906 - 127 15642176 - VC2177 - hypothetical protein 2150 51.92 +1 2322906..2323766 - 286 15642177 - VC2178 - hemK protein 2151 50.32 0 2323770..2324858 - 362 15642178 prfA VC2179 - peptide chain release factor 1 2152 50.08 0 2324888..2326147 - 419 15642179 hemA VC2180 - glutamyl-tRNA reductase 2153 46.23 0 2326288..2326923 + 211 15642180 lolB VC2181 - outer membrane lipoprotein LolB 2154 51.01 0 2326905..2327792 + 295 15642181 - VC2182 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2155 49.84 0 2327823..2328767 + 314 15642182 - VC2183 - ribose-phosphate pyrophosphokinase 2156 48.22 0 2328936..2329526 + 196 15642183 - VC2184 - peptidyl-tRNA hydrolase 2157 48.63 0 2329537..2330628 + 363 161581994 - VC2185 - translation-associated GTPase 2158 43.18 0 2332845..2332976 + 43 15642185 - VC2186 - hypothetical protein 2159 48.32 0 2332968..2334101 - 377 15642186 - VC2187 - flagellin 2160 48.77 0 2334656..2335795 - 379 15642187 - VC2188 - flagellin 2161 41.11 -1 2335944..2336123 - 59 15642188 - VC2189 - hypothetical protein 2162 47.40 0 2336203..2337396 - 397 15642189 flgL VC2190 - flagellar hook-associated protein FlgL 2163 47.95 0 2337409..2339283 - 624 15642190 flgK VC2191 - flagellar hook-associated protein FlgK 2164 48.78 0 2339463..2340401 - 312 15642191 flgJ VC2192 - peptidoglycan hydrolase 2165 50.46 0 2340412..2341497 - 361 15642192 flgI VC2193 - flagellar basal body P-ring protein 2166 49.11 0 2341588..2342373 - 261 15642193 flgH VC2194 - flagellar basal body L-ring protein 2167 48.92 0 2342388..2343176 - 262 15642194 flgG VC2195 - flagellar basal body rod protein FlgG 2168 51.60 0 2343196..2343945 - 249 15642195 flgF VC2196 - flagellar basal body rod protein FlgF 2169 47.43 0 2344128..2345432 - 434 15642196 flgE VC2197 - flagellar hook protein FlgE 2170 48.16 0 2345461..2346168 - 235 15642197 flgD VC2198 - flagellar basal body rod modification protein 2171 46.28 0 2346186..2346602 - 138 15642198 flgC VC2199 - flagellar basal body rod protein FlgC 2172 48.99 0 2346607..2347002 - 131 15642199 flgB VC2200 - flagellar basal body rod protein FlgB 2173 46.38 0 2347222..2348049 - 275 15642200 - VC2201 - chemotaxis protein methyltransferase CheR 2174 44.01 0 2348060..2348986 - 308 15642201 - VC2202 - chemotaxis protein CheV 2175 45.70 0 2349043..2349810 + 255 15642202 flgA VC2203 - flagellar basal body P-ring biosynthesis protein FlgA 2176 49.07 0 2349941..2350264 + 107 15642203 - VC2204 - negative regulator of flagellin synthesis FlgM, putative 2177 44.91 0 2350362..2350793 + 143 15642204 - VC2205 - hypothetical protein 2178 50.00 0 2350903..2351340 - 145 15642205 - VC2206 - hypothetical protein 2179 47.98 0 2351348..2352016 - 222 15642206 - VC2207 - hypothetical protein 2180 47.62 0 2352144..2353277 + 377 15642207 - VC2208 - hypothetical protein 2181 49.58 0 2353407..2360647 - 2413 15642774 vibF VC2209 - nonribosomal peptide synthetase VibF 2182 45.83 0 2360905..2361720 - 271 15642208 - VC2210 - vibriobactin utilization protein ViuB 2183 46.27 0 2362024..2364087 - 687 15642209 - VC2211 - ferric vibriobactin receptor 2184 43.35 0 2364507..2365205 + 232 15642210 - VC2212 - hypothetical protein 2185 47.72 0 2365293..2366258 - 321 15642211 - VC2213 - outer membrane protein OmpA 2186 48.50 0 2366554..2368083 - 509 15642212 gltX VC2214 - glutamyl-tRNA synthetase 2187 51.02 0 2368152..2370899 + 915 15642213 - VC2215 - cation transporter E1-E2 family ATPase 2188 46.80 0 2370896..2371348 + 150 15642214 - VC2216 - hypothetical protein 2189 49.55 0 2371485..2374136 - 883 15642215 - VC2217 - beta-N-acetylhexosaminidase 2190 42.11 -1 2374169..2374282 + 37 15642216 - VC2218 - hypothetical protein 2191 45.30 0 2374364..2374480 - 38 15642217 - VC2219 - hypothetical protein 2192 47.27 0 2374553..2375449 + 298 15642218 - VC2220 - hypothetical protein 2193 43.26 0 2375930..2376070 + 46 15642219 - VC2221 - hypothetical protein 2194 49.57 0 2376252..2376830 + 192 15642220 - VC2222 - hypothetical protein 2195 47.41 0 2376860..2377882 + 340 15642221 - VC2223 - pseudouridine synthase family 1 protein 2196 45.16 0 2377980..2379518 - 512 15642222 - VC2224 - GGDEF family protein 2197 46.41 0 2379749..2380375 - 208 15642223 upp VC2225 - uracil phosphoribosyltransferase 2198 50.14 0 2380542..2381582 + 346 15642224 - VC2226 - phosphoribosylaminoimidazole synthetase 2199 48.51 0 2381585..2382223 + 212 15642225 purN VC2227 - phosphoribosylglycinamide formyltransferase 2200 39.81 -1 2382242..2382349 + 35 15642226 - VC2228 - hypothetical protein 2201 50.24 0 2382364..2383209 - 281 15642227 - VC2229 - hypothetical protein 2202 45.66 0 2383272..2383847 - 191 15642228 gmhA VC2230 - phosphoheptose isomerase 2203 50.31 0 2384165..2386609 + 814 15642229 fadE VC2231 - acyl-CoA dehydrogenase 2204 47.30 0 2386756..2388015 - 419 15642230 - VC2232 - hypothetical protein 2205 47.58 0 2388024..2388767 - 247 15642231 - VC2233 - DNA polymerase III subunit epsilon 2206 52.87 +1 2388824..2389294 + 156 15642232 rnhA VC2234 - ribonuclease H 2207 45.39 0 2389365..2390102 - 245 15642233 - VC2235 - hypothetical protein 2208 49.41 0 2390140..2390898 + 252 15642234 - VC2236 - hydroxyacylglutathione hydrolase GloB, putative 2209 49.66 0 2390970..2392568 + 532 15642235 - VC2237 - membrane-bound lytic murein transglycosylase D 2210 47.87 0 2392585..2393430 - 281 15642236 - VC2238 - hypothetical protein 2211 47.54 0 2393498..2393842 - 114 15642237 - VC2239 - nitrogen regulatory protein P-II 2212 44.76 0 2393996..2394520 - 174 15642238 - VC2240 - decarboxylase 2213 51.54 0 2394897..2395220 - 107 15642239 - VC2241 - cytochrome c554 2214 52.31 +1 2395256..2396578 - 440 15642240 - VC2242 - mesJ protein 2215 46.67 0 2396546..2396650 + 34 15642241 - VC2243 - hypothetical protein 2216 50.00 0 2396718..2397677 - 319 15642242 - VC2244 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2217 50.73 0 2397732..2401226 - 1164 15642243 dnaE VC2245 - DNA polymerase III subunit alpha 2218 51.53 0 2401250..2401870 - 206 15642244 rnhB VC2246 - ribonuclease HII 2219 51.84 +1 2401895..2403034 - 379 15642245 lpxB VC2247 - lipid-A-disaccharide synthase 2220 49.56 0 2403195..2403983 - 262 15642246 - VC2248 - UDP-N-acetylglucosamine acyltransferase 2221 44.81 0 2403985..2404446 - 153 15642247 fabZ VC2249 - (3R)-hydroxymyristoyl-ACP dehydratase 2222 49.24 0 2404522..2405577 - 351 15642248 lpxD VC2250 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2223 44.71 0 2405587..2406096 - 169 15642249 - VC2251 - outer membrane protein OmpH 2224 47.76 0 2406111..2408522 - 803 15642250 - VC2252 - outer membrane protein assembly factor YaeT 2225 48.64 0 2408571..2409929 - 452 15642251 - VC2253 - hypothetical protein 2226 50.79 0 2409926..2411134 - 402 15642252 - VC2254 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2227 48.16 0 2411183..2412025 - 280 15642253 - VC2255 - phosphatidate cytidylyltransferase 2228 46.17 0 2412043..2412813 - 256 15642254 - VC2256 - undecaprenyl diphosphate synthase 2229 47.31 0 2412887..2413444 - 185 15642255 frr VC2257 - ribosome recycling factor 2230 49.04 0 2413498..2414229 - 243 15642256 pyrH VC2258 - uridylate kinase 2231 48.16 0 2414417..2415259 - 280 15642257 tsf VC2259 - elongation factor Ts 2232 47.33 0 2415391..2416119 - 242 15642258 rpsB VC2260 - 30S ribosomal protein S2 2233 46.86 0 2416460..2417302 + 280 15642259 - VC2261 - methionine aminopeptidase 2234 49.28 0 2417392..2420037 + 881 15642260 - VC2262 - PII uridylyl-transferase 2235 43.43 0 2420112..2420210 - 32 15642261 - VC2263 - hypothetical protein 2236 39.61 -1 2420283..2420696 + 137 15642262 - VC2264 - hypothetical protein 2237 48.82 0 2420737..2421246 - 169 15642263 - VC2265 - phosphatidylglycerophosphatase A 2238 50.35 0 2421243..2422247 - 334 15642264 - VC2266 - thiamine monophosphate kinase 2239 46.92 0 2422308..2422778 - 156 15642265 nusB VC2267 - transcription antitermination protein NusB 2240 46.92 0 2422778..2423248 - 156 161581993 ribH VC2268 - riboflavin synthase subunit beta 2241 51.44 0 2423513..2424622 - 369 15642267 - VC2269 - 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0